RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 ZNF324BQ6AW86 544 aaPredicted RBP14.3□□□□□ -0.12
RABGGTA-219ENST00000560871 OPN5Q6U736 354 aa14.3□□□□□ -0.12
RABGGTA-219ENST00000560871 IL20RBQ6UXL0 311 aa14.3□□□□□ -0.12
RABGGTA-219ENST00000560871 ZNF551Q7Z340 670 aaPredicted RBP14.3□□□□□ -0.12
RABGGTA-219ENST00000560871 OR2L13Q8N349 312 aa14.3□□□□□ -0.12
RABGGTA-219ENST00000560871 GRHL3Q8TE85 626 aa14.3□□□□□ -0.12
RABGGTA-219ENST00000560871 SPACA9Q96E40 222 aaPredicted RBP14.3□□□□□ -0.12
RABGGTA-219ENST00000560871 C5orf34Q96MH7 638 aa14.3□□□□□ -0.12
RABGGTA-219ENST00000560871 VSTM2LQ96N03 204 aa14.3□□□□□ -0.12
RABGGTA-219ENST00000560871 FRMD6Q96NE9 622 aa14.3□□□□□ -0.12
RABGGTA-219ENST00000560871 NXF5Q9H1B4 397 aaKnown RBP14.3□□□□□ -0.12
RABGGTA-219ENST00000560871 SH2D2AQ9NP31 389 aa14.3□□□□□ -0.12
RABGGTA-219ENST00000560871 ACSS1Q9NUB1 689 aaPredicted RBP14.3□□□□□ -0.12
RABGGTA-219ENST00000560871 AIG1Q9NVV5 245 aa14.3□□□□□ -0.12
RABGGTA-219ENST00000560871 PRODH2Q9UF12 536 aa14.3□□□□□ -0.12
RABGGTA-219ENST00000560871 USH1CQ9Y6N9 552 aa14.3□□□□□ -0.12
RABGGTA-219ENST00000560871 GOLGA8QA0A0J9YX86 632 aa14.29□□□□□ -0.12
RABGGTA-219ENST00000560871 GOLGA8OA6NCC3 632 aa14.29□□□□□ -0.12
RABGGTA-219ENST00000560871 ANKUB1A6NFN9 424 aa14.29□□□□□ -0.12
RABGGTA-219ENST00000560871 GOLGA8NF8WBI6 632 aa14.29□□□□□ -0.12
RABGGTA-219ENST00000560871 UPK1AO00322 258 aa14.29□□□□□ -0.12
RABGGTA-219ENST00000560871 ATP8B1O43520 1251 aa14.29□□□□□ -0.12
RABGGTA-219ENST00000560871 NME6O75414 186 aaPredicted RBP14.29□□□□□ -0.12
RABGGTA-219ENST00000560871 RASAL1O95294 804 aa14.29□□□□□ -0.12
RABGGTA-219ENST00000560871 LAMP1P11279 417 aa14.29□□□□□ -0.12
RABGGTA-219ENST00000560871 DDX5P17844 614 aaKnown RBP14.29□□□□□ -0.12
RABGGTA-219ENST00000560871 CDK9P50750 372 aaKnown RBP14.29□□□□□ -0.12
RABGGTA-219ENST00000560871 HSPB3Q12988 150 aa14.29□□□□□ -0.12
RABGGTA-219ENST00000560871 NNATQ16517 81 aa14.29□□□□□ -0.12
RABGGTA-219ENST00000560871 NTRK2Q16620 822 aa14.29□□□□□ -0.12
RABGGTA-219ENST00000560871 FAM180AQ6UWF9 173 aa14.29□□□□□ -0.12
RABGGTA-219ENST00000560871 NPSR1Q6W5P4 371 aa14.29□□□□□ -0.12
RABGGTA-219ENST00000560871 TAGAPQ8N103 731 aa14.29□□□□□ -0.12
RABGGTA-219ENST00000560871 GOLM1Q8NBJ4 401 aa14.29□□□□□ -0.12
RABGGTA-219ENST00000560871 ST6GALNAC3Q8NDV1 305 aa14.29□□□□□ -0.12
RABGGTA-219ENST00000560871 PSD4Q8NDX1 1056 aa14.29□□□□□ -0.12
RABGGTA-219ENST00000560871 ZFP28Q8NHY6 868 aa14.29□□□□□ -0.12
RABGGTA-219ENST00000560871 SSC4DQ8WTU2 575 aa14.29□□□□□ -0.12
RABGGTA-219ENST00000560871 FAR1Q8WVX9 515 aa14.29□□□□□ -0.12
RABGGTA-219ENST00000560871 TMEM125Q96AQ2 219 aa14.29□□□□□ -0.12
RABGGTA-219ENST00000560871 COQ8BQ96D53 544 aa14.29□□□□□ -0.12
RABGGTA-219ENST00000560871 ELP4Q96EB1 424 aa14.29□□□□□ -0.12
RABGGTA-219ENST00000560871 ZBED6CLQ96FA7 236 aaPredicted RBP14.29□□□□□ -0.12
RABGGTA-219ENST00000560871 BTBD9Q96Q07 612 aa14.29□□□□□ -0.12
RABGGTA-219ENST00000560871 SLX1AQ9BQ83 275 aa14.29□□□□□ -0.12
RABGGTA-219ENST00000560871 FOLH1BQ9HBA9 442 aa14.29□□□□□ -0.12
RABGGTA-219ENST00000560871 MED4Q9NPJ6 270 aa14.29□□□□□ -0.12
RABGGTA-219ENST00000560871 SIRT3Q9NTG7 399 aaPredicted RBP14.29□□□□□ -0.12
RABGGTA-219ENST00000560871 C19orf53Q9UNZ5 99 aaPredicted RBP14.29□□□□□ -0.12
RABGGTA-219ENST00000560871 ERVK-11Q9UQG0 969 aa14.29□□□□□ -0.12
RABGGTA-219ENST00000560871 HECTD1Q9ULT8 2610 aa14.29□□□□□ -0.12
RABGGTA-219ENST00000560871 PTPN13Q12923 2485 aa14.29□□□□□ -0.12
RABGGTA-219ENST00000560871 PRRC2CQ9Y520 2896 aaKnown RBP14.28□□□□□ -0.12
RABGGTA-219ENST00000560871 FRG2CA6NGY1 282 aa14.28□□□□□ -0.12
RABGGTA-219ENST00000560871 COQ9O75208 318 aa14.28□□□□□ -0.12
RABGGTA-219ENST00000560871 CCL3P10147 92 aa14.28□□□□□ -0.12
RABGGTA-219ENST00000560871 TDGF1P3P51864 188 aa14.28□□□□□ -0.12
RABGGTA-219ENST00000560871 DCAF7P61962 342 aa14.28□□□□□ -0.12
RABGGTA-219ENST00000560871 MAPKAPK3Q16644 382 aa14.28□□□□□ -0.12
RABGGTA-219ENST00000560871 HLA-DQA1Q5Y7H0 255 aa14.28□□□□□ -0.12
RABGGTA-219ENST00000560871 RTL4Q6ZR62 310 aa14.28□□□□□ -0.12
RABGGTA-219ENST00000560871 DND1Q8IYX4 353 aaKnown RBP14.28□□□□□ -0.12
RABGGTA-219ENST00000560871 ACTRT2Q8TDY3 377 aa14.28□□□□□ -0.12
RABGGTA-219ENST00000560871 PAQR8Q8TEZ7 354 aa14.28□□□□□ -0.12
RABGGTA-219ENST00000560871 LCORQ96JN0 433 aaPredicted RBP14.28□□□□□ -0.12
RABGGTA-219ENST00000560871 SGCZQ96LD1 299 aa14.28□□□□□ -0.12
RABGGTA-219ENST00000560871 OR52B2Q96RD2 323 aa14.28□□□□□ -0.12
RABGGTA-219ENST00000560871 BHLHE41Q9C0J9 482 aaPredicted RBP14.28□□□□□ -0.12
RABGGTA-219ENST00000560871 TIMMDC1Q9NPL8 285 aa14.28□□□□□ -0.12
RABGGTA-219ENST00000560871 DEPPQ9NTK1 212 aa14.28□□□□□ -0.12
RABGGTA-219ENST00000560871 ATAD3AQ9NVI7 634 aa14.28□□□□□ -0.12
RABGGTA-219ENST00000560871 DDX18Q9NVP1 670 aaKnown RBP14.28□□□□□ -0.12
RABGGTA-219ENST00000560871 NTMQ9P121 344 aa14.28□□□□□ -0.12
RABGGTA-219ENST00000560871 MAPRE3Q9UPY8 281 aa14.28□□□□□ -0.12
RABGGTA-219ENST00000560871 GPR55Q9Y2T6 319 aaPredicted RBP14.28□□□□□ -0.12
RABGGTA-219ENST00000560871 KLF13Q9Y2Y9 288 aaPredicted RBP14.28□□□□□ -0.12
RABGGTA-219ENST00000560871 NPFFR2Q9Y5X5 522 aa14.28□□□□□ -0.12
RABGGTA-219ENST00000560871 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.27□□□□□ -0.13
RABGGTA-219ENST00000560871 WIPF3A6NGB9 483 aa14.27□□□□□ -0.13
RABGGTA-219ENST00000560871 TO15178 435 aa14.27□□□□□ -0.13
RABGGTA-219ENST00000560871 RNF224P0DH78 156 aa14.27□□□□□ -0.13
RABGGTA-219ENST00000560871 CT45A8P0DMV1 189 aa14.27□□□□□ -0.13
RABGGTA-219ENST00000560871 CT45A9P0DMV2 189 aa14.27□□□□□ -0.13
RABGGTA-219ENST00000560871 EDN3P14138 238 aa14.27□□□□□ -0.13
RABGGTA-219ENST00000560871 EFNA1P20827 205 aaPredicted RBP14.27□□□□□ -0.13
RABGGTA-219ENST00000560871 DRD5P21918 477 aa14.27□□□□□ -0.13
RABGGTA-219ENST00000560871 ABCD3P28288 659 aa14.27□□□□□ -0.13
RABGGTA-219ENST00000560871 GPC1P35052 558 aa14.27□□□□□ -0.13
RABGGTA-219ENST00000560871 PPICP45877 212 aa14.27□□□□□ -0.13
RABGGTA-219ENST00000560871 WNT3P56703 355 aa14.27□□□□□ -0.13
RABGGTA-219ENST00000560871 PSG6Q00889 435 aa14.27□□□□□ -0.13
RABGGTA-219ENST00000560871 ELOAQ14241 798 aaKnown RBP14.27□□□□□ -0.13
RABGGTA-219ENST00000560871 RPS6KA2Q15349 733 aa14.27□□□□□ -0.13
RABGGTA-219ENST00000560871 CT45A2Q5DJT8 189 aa14.27□□□□□ -0.13
RABGGTA-219ENST00000560871 CPTPQ5TA50 214 aa14.27□□□□□ -0.13
RABGGTA-219ENST00000560871 EPGNQ6UW88 154 aa14.27□□□□□ -0.13
RABGGTA-219ENST00000560871 TMEM64Q6YI46 380 aa14.27□□□□□ -0.13
RABGGTA-219ENST00000560871 FAM47EQ6ZV65 393 aa14.27□□□□□ -0.13
RABGGTA-219ENST00000560871 SPATA19Q7Z5L4 167 aa14.27□□□□□ -0.13
RABGGTA-219ENST00000560871 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms