RNA–Protein interactions for RNA: ENST00000560867.1

HMG20A-211, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-211ENST00000560867 TFB1MQ8WVM0 346 aaKnown RBP3.9□□□□□ -1.79
HMG20A-211ENST00000560867 COQ7Q99807 217 aa3.9□□□□□ -1.79
HMG20A-211ENST00000560867 NDUFAF3Q9BU61 184 aa3.9□□□□□ -1.79
HMG20A-211ENST00000560867 ABCG8Q9H221 673 aa3.9□□□□□ -1.79
HMG20A-211ENST00000560867 NRN1Q9NPD7 142 aa3.9□□□□□ -1.79
HMG20A-211ENST00000560867 BCAP29Q9UHQ4 241 aa3.9□□□□□ -1.79
HMG20A-211ENST00000560867 IKZF3Q9UKT9 509 aa3.9□□□□□ -1.79
HMG20A-211ENST00000560867 NAALAD2Q9Y3Q0 740 aa3.9□□□□□ -1.79
HMG20A-211ENST00000560867 ZSCAN5CA6NGD5 496 aaPredicted RBP3.89□□□□□ -1.79
HMG20A-211ENST00000560867 LRRTM2O43300 516 aa3.89□□□□□ -1.79
HMG20A-211ENST00000560867 ZNF253O75346 499 aa3.89□□□□□ -1.79
HMG20A-211ENST00000560867 STK17BO94768 372 aa3.89□□□□□ -1.79
HMG20A-211ENST00000560867 ECDO95905 644 aaPredicted RBP3.89□□□□□ -1.79
HMG20A-211ENST00000560867 HOXB7P09629 217 aa3.89□□□□□ -1.79
HMG20A-211ENST00000560867 GNSP15586 552 aa3.89□□□□□ -1.79
HMG20A-211ENST00000560867 SAA4P35542 130 aa3.89□□□□□ -1.79
HMG20A-211ENST00000560867 HMGCS2P54868 508 aa3.89□□□□□ -1.79
HMG20A-211ENST00000560867 NLRP11P59045 1033 aaKnown RBP3.89□□□□□ -1.79
HMG20A-211ENST00000560867 HERVK_113P63132 956 aa3.89□□□□□ -1.79
HMG20A-211ENST00000560867 ERVK-8P63133 956 aa3.89□□□□□ -1.79
HMG20A-211ENST00000560867 CCDC40Q4G0X9 1142 aa3.89□□□□□ -1.79
HMG20A-211ENST00000560867 CMPK2Q5EBM0 449 aa3.89□□□□□ -1.79
HMG20A-211ENST00000560867 FAM219BQ5XKK7 198 aa3.89□□□□□ -1.79
HMG20A-211ENST00000560867 CCBE1Q6UXH8 406 aaPredicted RBP3.89□□□□□ -1.79
HMG20A-211ENST00000560867 DQX1Q8TE96 717 aaKnown RBP3.89□□□□□ -1.79
HMG20A-211ENST00000560867 DLX4Q92988 240 aaPredicted RBP3.89□□□□□ -1.79
HMG20A-211ENST00000560867 CCDC51Q96ER9 411 aa3.89□□□□□ -1.79
HMG20A-211ENST00000560867 NSMCE2Q96MF7 247 aa3.89□□□□□ -1.79
HMG20A-211ENST00000560867 ERVK-6Q9BXR3 956 aa3.89□□□□□ -1.79
HMG20A-211ENST00000560867 RNF41Q9H4P4 317 aaPredicted RBP3.89□□□□□ -1.79
HMG20A-211ENST00000560867 SYTL2Q9HCH5 934 aa3.89□□□□□ -1.79
HMG20A-211ENST00000560867 ZMYM6O95789 1325 aa3.89□□□□□ -1.79
HMG20A-211ENST00000560867 TRAV9-2A0A087WT02 112 aa3.88□□□□□ -1.79
HMG20A-211ENST00000560867 TRBV7-9A0A0J9YWB2 115 aa3.88□□□□□ -1.79
HMG20A-211ENST00000560867 LRIT2A6NDA9 550 aa3.88□□□□□ -1.79
HMG20A-211ENST00000560867 TYROBPO43914 113 aa3.88□□□□□ -1.79
HMG20A-211ENST00000560867 RHBDL1O75783 438 aa3.88□□□□□ -1.79
HMG20A-211ENST00000560867 GJB5O95377 273 aa3.88□□□□□ -1.79
HMG20A-211ENST00000560867 OAS1P00973 400 aaKnown RBP3.88□□□□□ -1.79
HMG20A-211ENST00000560867 MT-ND3P03897 115 aa3.88□□□□□ -1.79
HMG20A-211ENST00000560867 ALPPP05187 535 aa3.88□□□□□ -1.79
HMG20A-211ENST00000560867 CCDC192P0DO97 292 aa3.88□□□□□ -1.79
HMG20A-211ENST00000560867 ALPPL2P10696 532 aa3.88□□□□□ -1.79
HMG20A-211ENST00000560867 RALAP11233 206 aa3.88□□□□□ -1.79
HMG20A-211ENST00000560867 PVRP15151 417 aa3.88□□□□□ -1.79
HMG20A-211ENST00000560867 SGSHP51688 502 aa3.88□□□□□ -1.79
HMG20A-211ENST00000560867 METAP1P53582 386 aa3.88□□□□□ -1.79
HMG20A-211ENST00000560867 MYBPC1Q00872 1141 aa3.88□□□□□ -1.79
HMG20A-211ENST00000560867 ZNF85Q03923 595 aa3.88□□□□□ -1.79
HMG20A-211ENST00000560867 SNX1Q13596 522 aa3.88□□□□□ -1.79
HMG20A-211ENST00000560867 TIMM50Q3ZCQ8 353 aa3.88□□□□□ -1.79
HMG20A-211ENST00000560867 PAQR9Q6ZVX9 377 aa3.88□□□□□ -1.79
HMG20A-211ENST00000560867 GPBP1Q86WP2 473 aa3.88□□□□□ -1.79
HMG20A-211ENST00000560867 RELL2Q8NC24 303 aaPredicted RBP3.88□□□□□ -1.79
HMG20A-211ENST00000560867 CCNYQ8ND76 341 aa3.88□□□□□ -1.79
HMG20A-211ENST00000560867 FNDC8Q8TC99 324 aa3.88□□□□□ -1.79
HMG20A-211ENST00000560867 ZPLD1Q8TCW7 415 aa3.88□□□□□ -1.79
HMG20A-211ENST00000560867 LHX4Q969G2 390 aa3.88□□□□□ -1.79
HMG20A-211ENST00000560867 C14orf79Q96F83 325 aa3.88□□□□□ -1.79
HMG20A-211ENST00000560867 MCCC1Q96RQ3 725 aaPredicted RBP3.88□□□□□ -1.79
HMG20A-211ENST00000560867 TSPY26PQ9H489 355 aa3.88□□□□□ -1.79
HMG20A-211ENST00000560867 TIGARQ9NQ88 270 aa3.88□□□□□ -1.79
HMG20A-211ENST00000560867 FAM120CQ9NX05 1096 aaKnown RBP3.88□□□□□ -1.79
HMG20A-211ENST00000560867 DHRS4-AS1Q9P1J3 65 aa3.88□□□□□ -1.79
HMG20A-211ENST00000560867 ARMCX1Q9P291 453 aa3.88□□□□□ -1.79
HMG20A-211ENST00000560867 NTNG1Q9Y2I2 539 aa3.88□□□□□ -1.79
HMG20A-211ENST00000560867 RNF103-CHMP3A0A140T963 221 aa3.87□□□□□ -1.79
HMG20A-211ENST00000560867 TRABD2BA6NFA1 517 aa3.87□□□□□ -1.79
HMG20A-211ENST00000560867 CFAP73A6NFT4 308 aa3.87□□□□□ -1.79
HMG20A-211ENST00000560867 MFSD2BA6NFX1 497 aa3.87□□□□□ -1.79
HMG20A-211ENST00000560867 PHOX2AO14813 284 aa3.87□□□□□ -1.79
HMG20A-211ENST00000560867 NDUFA7O95182 113 aa3.87□□□□□ -1.79
HMG20A-211ENST00000560867 THY1P04216 161 aa3.87□□□□□ -1.79
HMG20A-211ENST00000560867 SFNP31947 248 aa3.87□□□□□ -1.79
HMG20A-211ENST00000560867 WASHC5Q12768 1159 aa3.87□□□□□ -1.79
HMG20A-211ENST00000560867 PPP2R5CQ13362 524 aa3.87□□□□□ -1.79
HMG20A-211ENST00000560867 LTB4RQ15722 352 aa3.87□□□□□ -1.79
HMG20A-211ENST00000560867 PKN2Q16513 984 aaKnown RBP3.87□□□□□ -1.79
HMG20A-211ENST00000560867 PARP6Q2NL67 630 aa3.87□□□□□ -1.79
HMG20A-211ENST00000560867 TCHHL1Q5QJ38 904 aaPredicted RBP3.87□□□□□ -1.79
HMG20A-211ENST00000560867 KRTAP5-11Q6L8G4 156 aa3.87□□□□□ -1.79
HMG20A-211ENST00000560867 LEG1Q6P5S2 330 aa3.87□□□□□ -1.79
HMG20A-211ENST00000560867 PAMR1Q6UXH9 720 aa3.87□□□□□ -1.79
HMG20A-211ENST00000560867 C2orf66Q6UXQ4 117 aa3.87□□□□□ -1.79
HMG20A-211ENST00000560867 AMZ2Q86W34 360 aa3.87□□□□□ -1.79
HMG20A-211ENST00000560867 KDM8Q8N371 416 aa3.87□□□□□ -1.79
HMG20A-211ENST00000560867 HDDC3Q8N4P3 179 aa3.87□□□□□ -1.79
HMG20A-211ENST00000560867 MRPL43Q8N983 215 aaKnown RBP3.87□□□□□ -1.79
HMG20A-211ENST00000560867 MGARPQ8TDB4 240 aa3.87□□□□□ -1.79
HMG20A-211ENST00000560867 PHYHIPQ92561 330 aa3.87□□□□□ -1.79
HMG20A-211ENST00000560867 DEFB118Q96PH6 123 aa3.87□□□□□ -1.79
HMG20A-211ENST00000560867 SIGLEC12Q96PQ1 595 aa3.87□□□□□ -1.79
HMG20A-211ENST00000560867 NLNQ9BYT8 704 aa3.87□□□□□ -1.79
HMG20A-211ENST00000560867 NMNAT2Q9BZQ4 307 aa3.87□□□□□ -1.79
HMG20A-211ENST00000560867 SIRPDQ9H106 197 aa3.87□□□□□ -1.79
HMG20A-211ENST00000560867 ESM1Q9NQ30 184 aa3.87□□□□□ -1.79
HMG20A-211ENST00000560867 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.87□□□□□ -1.79
HMG20A-211ENST00000560867 RPH3AQ9Y2J0 694 aaPredicted RBP3.87□□□□□ -1.79
HMG20A-211ENST00000560867 KLHDC2Q9Y2U9 406 aa3.87□□□□□ -1.79
HMG20A-211ENST00000560867 RNF115Q9Y4L5 304 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms