RNA–Protein interactions for RNA: ENST00000560754.1

RNF31-223, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-223	ENST00000560754	CSNK2A2	P19784	350 aa	Predicted RBP	12.44	□□□□□ -0.42
RNF31-223	ENST00000560754	NT5E	P21589	574 aa		12.44	□□□□□ -0.42
RNF31-223	ENST00000560754	DNASE1	P24855	282 aa		12.44	□□□□□ -0.42
RNF31-223	ENST00000560754	PHB	P35232	272 aa		12.44	□□□□□ -0.42
RNF31-223	ENST00000560754	MASP1	P48740	699 aa		12.44	□□□□□ -0.42
RNF31-223	ENST00000560754	MAPK12	P53778	367 aa		12.44	□□□□□ -0.42
RNF31-223	ENST00000560754	DCAF7	P61962	342 aa		12.44	□□□□□ -0.42
RNF31-223	ENST00000560754	SLC7A5	Q01650	507 aa		12.44	□□□□□ -0.42
RNF31-223	ENST00000560754	GALNT1	Q10472	559 aa	Predicted RBP	12.44	□□□□□ -0.42
RNF31-223	ENST00000560754	IFT88	Q13099	833 aa		12.44	□□□□□ -0.42
RNF31-223	ENST00000560754	WIPI1	Q5MNZ9	446 aa	Predicted RBP	12.44	□□□□□ -0.42
RNF31-223	ENST00000560754	DCST1	Q5T197	706 aa		12.44	□□□□□ -0.42
RNF31-223	ENST00000560754	DESI1	Q6ICB0	168 aa		12.44	□□□□□ -0.42
RNF31-223	ENST00000560754	PRR22	Q8IZ63	422 aa		12.44	□□□□□ -0.42
RNF31-223	ENST00000560754	VWA5B2	Q8N398	1253 aa		12.44	□□□□□ -0.42
RNF31-223	ENST00000560754	WDSUB1	Q8N9V3	476 aa		12.44	□□□□□ -0.42
RNF31-223	ENST00000560754	SIMC1	Q8NDZ2	872 aa		12.44	□□□□□ -0.42
RNF31-223	ENST00000560754	FAM83F	Q8NEG4	500 aa	Predicted RBP	12.44	□□□□□ -0.42
RNF31-223	ENST00000560754	OR4F6	Q8NGB9	312 aa		12.44	□□□□□ -0.42
RNF31-223	ENST00000560754	GOT1L1	Q8NHS2	421 aa	Predicted RBP	12.44	□□□□□ -0.42
RNF31-223	ENST00000560754	RMND5B	Q96G75	393 aa	Predicted RBP	12.44	□□□□□ -0.42
RNF31-223	ENST00000560754	NODAL	Q96S42	347 aa		12.44	□□□□□ -0.42
RNF31-223	ENST00000560754	LRRC1	Q9BTT6	524 aa		12.44	□□□□□ -0.42
RNF31-223	ENST00000560754	C1QTNF3	Q9BXJ4	246 aa		12.44	□□□□□ -0.42
RNF31-223	ENST00000560754	BRF2	Q9HAW0	419 aa		12.44	□□□□□ -0.42
RNF31-223	ENST00000560754	DLL4	Q9NR61	685 aa		12.44	□□□□□ -0.42
RNF31-223	ENST00000560754	FARSB	Q9NSD9	589 aa	Known RBP	12.44	□□□□□ -0.42
RNF31-223	ENST00000560754	MAT2B	Q9NZL9	334 aa		12.44	□□□□□ -0.42
RNF31-223	ENST00000560754	ZNF225	Q9UK10	706 aa		12.44	□□□□□ -0.42
RNF31-223	ENST00000560754	PSME2	Q9UL46	239 aa		12.44	□□□□□ -0.42
RNF31-223	ENST00000560754	MRPS18C	Q9Y3D5	142 aa	Known RBP	12.44	□□□□□ -0.42
RNF31-223	ENST00000560754	ESYT3	A0FGR9	886 aa		12.43	□□□□□ -0.42
RNF31-223	ENST00000560754	GOLGA6L10	A6NI86	522 aa		12.43	□□□□□ -0.42
RNF31-223	ENST00000560754	GNB5	O14775	395 aa		12.43	□□□□□ -0.42
RNF31-223	ENST00000560754	T	O15178	435 aa		12.43	□□□□□ -0.42
RNF31-223	ENST00000560754	RCBTB2	O95199	551 aa		12.43	□□□□□ -0.42
RNF31-223	ENST00000560754	GOSR1	O95249	250 aa		12.43	□□□□□ -0.42
RNF31-223	ENST00000560754	CBX7	O95931	251 aa		12.43	□□□□□ -0.42
RNF31-223	ENST00000560754	PDYN	P01213	254 aa		12.43	□□□□□ -0.42
RNF31-223	ENST00000560754	RPS17	P08708	135 aa	Known RBP	12.43	□□□□□ -0.42
RNF31-223	ENST00000560754	SBK3	P0C264	359 aa		12.43	□□□□□ -0.42
RNF31-223	ENST00000560754	HOXB4	P17483	251 aa	Predicted RBP	12.43	□□□□□ -0.42
RNF31-223	ENST00000560754	DEK	P35659	375 aa	Known RBP	12.43	□□□□□ -0.42
RNF31-223	ENST00000560754	FEN1	P39748	380 aa	Known RBP	12.43	□□□□□ -0.42
RNF31-223	ENST00000560754	SLCO1A2	P46721	670 aa		12.43	□□□□□ -0.42
RNF31-223	ENST00000560754	EMD	P50402	254 aa		12.43	□□□□□ -0.42
RNF31-223	ENST00000560754	TRA2B	P62995	288 aa	Known RBP	12.43	□□□□□ -0.42
RNF31-223	ENST00000560754	SORD	Q00796	357 aa		12.43	□□□□□ -0.42
RNF31-223	ENST00000560754	EXOSC7	Q15024	291 aa	Known RBP	12.43	□□□□□ -0.42
RNF31-223	ENST00000560754	CEBPE	Q15744	281 aa		12.43	□□□□□ -0.42
RNF31-223	ENST00000560754	UAP1	Q16222	522 aa	Predicted RBP	12.43	□□□□□ -0.42
RNF31-223	ENST00000560754	TRMT12	Q53H54	448 aa	Known RBP	12.43	□□□□□ -0.42
RNF31-223	ENST00000560754	UBAP2	Q5T6F2	1119 aa	Known RBP	12.43	□□□□□ -0.42
RNF31-223	ENST00000560754	TTC19	Q6DKK2	380 aa	Predicted RBP	12.43	□□□□□ -0.42
RNF31-223	ENST00000560754	COMMD6	Q7Z4G1	85 aa		12.43	□□□□□ -0.42
RNF31-223	ENST00000560754	ZNF483	Q8TF39	744 aa	Predicted RBP	12.43	□□□□□ -0.42
RNF31-223	ENST00000560754	CNRIP1	Q96F85	164 aa	Predicted RBP	12.43	□□□□□ -0.42
RNF31-223	ENST00000560754	TRIB1	Q96RU8	372 aa		12.43	□□□□□ -0.42
RNF31-223	ENST00000560754	MRPL57	Q9BQC6	102 aa	Known RBP	12.43	□□□□□ -0.42
RNF31-223	ENST00000560754	PLEKHF2	Q9H8W4	249 aa		12.43	□□□□□ -0.42
RNF31-223	ENST00000560754	NINJ2	Q9NZG7	142 aa		12.43	□□□□□ -0.42
RNF31-223	ENST00000560754	PLEKHA6	Q9Y2H5	1048 aa		12.43	□□□□□ -0.42
RNF31-223	ENST00000560754	RPH3A	Q9Y2J0	694 aa	Predicted RBP	12.43	□□□□□ -0.42
RNF31-223	ENST00000560754	GPR55	Q9Y2T6	319 aa	Predicted RBP	12.43	□□□□□ -0.42
RNF31-223	ENST00000560754	VPS13C	Q709C8	3753 aa		12.42	□□□□□ -0.42
RNF31-223	ENST00000560754	C2orf72	A6NCS6	295 aa		12.42	□□□□□ -0.42
RNF31-223	ENST00000560754	SNPH	O15079	494 aa		12.42	□□□□□ -0.42
RNF31-223	ENST00000560754	UGT2B11	O75310	529 aa		12.42	□□□□□ -0.42
RNF31-223	ENST00000560754	OTC	P00480	354 aa		12.42	□□□□□ -0.42
RNF31-223	ENST00000560754	KRT15	P19012	456 aa		12.42	□□□□□ -0.42
RNF31-223	ENST00000560754	TACR1	P25103	407 aa		12.42	□□□□□ -0.42
RNF31-223	ENST00000560754	HSD17B3	P37058	310 aa		12.42	□□□□□ -0.42
RNF31-223	ENST00000560754	SERPINB9	P50453	376 aa		12.42	□□□□□ -0.42
RNF31-223	ENST00000560754	AGFG1	P52594	562 aa	Known RBP	12.42	□□□□□ -0.42
RNF31-223	ENST00000560754	GFRA1	P56159	465 aa		12.42	□□□□□ -0.42
RNF31-223	ENST00000560754	ADAM8	P78325	824 aa		12.42	□□□□□ -0.42
RNF31-223	ENST00000560754	DUSP2	Q05923	314 aa		12.42	□□□□□ -0.42
RNF31-223	ENST00000560754	TOMM20	Q15388	145 aa		12.42	□□□□□ -0.42
RNF31-223	ENST00000560754	TSNAXIP1	Q2TAA8	658 aa		12.42	□□□□□ -0.42
RNF31-223	ENST00000560754	C6orf163	Q5TEZ5	329 aa		12.42	□□□□□ -0.42
RNF31-223	ENST00000560754	ANGPTL8	Q6UXH0	198 aa		12.42	□□□□□ -0.42
RNF31-223	ENST00000560754	SYT10	Q6XYQ8	523 aa		12.42	□□□□□ -0.42
RNF31-223	ENST00000560754	YRDC	Q86U90	279 aa	Known RBP	12.42	□□□□□ -0.42
RNF31-223	ENST00000560754	TRIM42	Q8IWZ5	723 aa		12.42	□□□□□ -0.42
RNF31-223	ENST00000560754	MMP21	Q8N119	569 aa		12.42	□□□□□ -0.42
RNF31-223	ENST00000560754	ADCY4	Q8NFM4	1077 aa		12.42	□□□□□ -0.42
RNF31-223	ENST00000560754	LINC01560	Q8TB33	94 aa		12.42	□□□□□ -0.42
RNF31-223	ENST00000560754	OMA1	Q96E52	524 aa		12.42	□□□□□ -0.42
RNF31-223	ENST00000560754	ZFP3	Q96NJ6	502 aa		12.42	□□□□□ -0.42
RNF31-223	ENST00000560754	G6PC3	Q9BUM1	346 aa		12.42	□□□□□ -0.42
RNF31-223	ENST00000560754	BRINP2	Q9C0B6	783 aa		12.42	□□□□□ -0.42
RNF31-223	ENST00000560754	ELOVL6	Q9H5J4	265 aa		12.42	□□□□□ -0.42
RNF31-223	ENST00000560754	METTL7A	Q9H8H3	244 aa		12.42	□□□□□ -0.42
RNF31-223	ENST00000560754	NMRK1	Q9NWW6	199 aa		12.42	□□□□□ -0.42
RNF31-223	ENST00000560754	BCAP29	Q9UHQ4	241 aa		12.42	□□□□□ -0.42
RNF31-223	ENST00000560754	SLC12A4	Q9UP95	1085 aa		12.42	□□□□□ -0.42
RNF31-223	ENST00000560754	ARID1A	O14497	2285 aa		12.41	□□□□□ -0.42
RNF31-223	ENST00000560754	OR6C70	A6NIJ9	312 aa		12.41	□□□□□ -0.42
RNF31-223	ENST00000560754	DIAPH2	O60879	1101 aa		12.41	□□□□□ -0.42
RNF31-223	ENST00000560754	SMIM24	O75264	130 aa		12.41	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms