RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, human

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP8-209	ENST00000560297	YARS2	Q9Y2Z4	477 aa	Known RBP	11.38	□□□□□ -0.59
USP8-209	ENST00000560297	PCDHGB7	Q9Y5F8	929 aa		11.38	□□□□□ -0.59
USP8-209	ENST00000560297	HEMK1	Q9Y5R4	338 aa	Predicted RBP	11.38	□□□□□ -0.59
USP8-209	ENST00000560297	CROCC	Q5TZA2	2017 aa		11.38	□□□□□ -0.59
USP8-209	ENST00000560297	PTPRQ	Q9UMZ3	2332 aa		11.37	□□□□□ -0.59
USP8-209	ENST00000560297	CELSR3	Q9NYQ7	3312 aa		11.37	□□□□□ -0.59
USP8-209	ENST00000560297		A0A096LPI6	279 aa		11.37	□□□□□ -0.59
USP8-209	ENST00000560297	LOC100653049	A0A140TA62	436 aa		11.37	□□□□□ -0.59
USP8-209	ENST00000560297	KRT34	O76011	436 aa		11.37	□□□□□ -0.59
USP8-209	ENST00000560297	KCNH1	O95259	989 aa		11.37	□□□□□ -0.59
USP8-209	ENST00000560297	NPPA	P01160	153 aa		11.37	□□□□□ -0.59
USP8-209	ENST00000560297	KRT16	P08779	473 aa		11.37	□□□□□ -0.59
USP8-209	ENST00000560297	PRDX6	P30041	224 aa		11.37	□□□□□ -0.59
USP8-209	ENST00000560297	SOAT1	P35610	550 aa		11.37	□□□□□ -0.59
USP8-209	ENST00000560297	PRIM2	P49643	509 aa		11.37	□□□□□ -0.59
USP8-209	ENST00000560297	MLF1	P58340	268 aa		11.37	□□□□□ -0.59
USP8-209	ENST00000560297	TXNL4A	P83876	142 aa	Known RBP	11.37	□□□□□ -0.59
USP8-209	ENST00000560297	EBP	Q15125	230 aa	Known RBP	11.37	□□□□□ -0.59
USP8-209	ENST00000560297	ZNHIT3	Q15649	155 aa	Predicted RBP	11.37	□□□□□ -0.59
USP8-209	ENST00000560297	COL28A1	Q2UY09	1125 aa		11.37	□□□□□ -0.59
USP8-209	ENST00000560297	MMEL1	Q495T6	779 aa		11.37	□□□□□ -0.59
USP8-209	ENST00000560297	PIGG	Q5H8A4	983 aa		11.37	□□□□□ -0.59
USP8-209	ENST00000560297	COQ5	Q5HYK3	327 aa		11.37	□□□□□ -0.59
USP8-209	ENST00000560297	ACER2	Q5QJU3	275 aa		11.37	□□□□□ -0.59
USP8-209	ENST00000560297	TCTN3	Q6NUS6	607 aa		11.37	□□□□□ -0.59
USP8-209	ENST00000560297	SLC2A7	Q6PXP3	512 aa		11.37	□□□□□ -0.59
USP8-209	ENST00000560297	SZRD1	Q7Z422	152 aa		11.37	□□□□□ -0.59
USP8-209	ENST00000560297	C6orf120	Q7Z4R8	191 aa		11.37	□□□□□ -0.59
USP8-209	ENST00000560297	TAGAP	Q8N103	731 aa		11.37	□□□□□ -0.59
USP8-209	ENST00000560297	DPP10	Q8N608	796 aa		11.37	□□□□□ -0.59
USP8-209	ENST00000560297	SIRT6	Q8N6T7	355 aa		11.37	□□□□□ -0.59
USP8-209	ENST00000560297	CDRT4	Q8N9R6	151 aa		11.37	□□□□□ -0.59
USP8-209	ENST00000560297	FDCSP	Q8NFU4	85 aa		11.37	□□□□□ -0.59
USP8-209	ENST00000560297	THAP3	Q8WTV1	239 aa	Predicted RBP	11.37	□□□□□ -0.59
USP8-209	ENST00000560297	ADIPOR1	Q96A54	375 aa		11.37	□□□□□ -0.59
USP8-209	ENST00000560297	VSTM2L	Q96N03	204 aa		11.37	□□□□□ -0.59
USP8-209	ENST00000560297	MS4A4E	Q96PG1	132 aa		11.37	□□□□□ -0.59
USP8-209	ENST00000560297	SMAD5	Q99717	465 aa	Known RBP	11.37	□□□□□ -0.59
USP8-209	ENST00000560297	ARHGAP9	Q9BRR9	750 aa		11.37	□□□□□ -0.59
USP8-209	ENST00000560297	INPP5K	Q9BT40	448 aa		11.37	□□□□□ -0.59
USP8-209	ENST00000560297	TRIM4	Q9C037	500 aa		11.37	□□□□□ -0.59
USP8-209	ENST00000560297	ADNP	Q9H2P0	1102 aa		11.37	□□□□□ -0.59
USP8-209	ENST00000560297	ANKRA2	Q9H9E1	313 aa		11.37	□□□□□ -0.59
USP8-209	ENST00000560297	TUBD1	Q9UJT1	453 aa		11.37	□□□□□ -0.59
USP8-209	ENST00000560297	FAF1	Q9UNN5	650 aa	Predicted RBP	11.37	□□□□□ -0.59
USP8-209	ENST00000560297	RNF103-CHMP3	A0A140T963	221 aa		11.36	□□□□□ -0.59
USP8-209	ENST00000560297	ASPDH	A6ND91	283 aa		11.36	□□□□□ -0.59
USP8-209	ENST00000560297	TMEM200C	A6NKL6	621 aa		11.36	□□□□□ -0.59
USP8-209	ENST00000560297	DUXA	A6NLW8	204 aa		11.36	□□□□□ -0.59
USP8-209	ENST00000560297	CAPN14	A8MX76	684 aa		11.36	□□□□□ -0.59
USP8-209	ENST00000560297	ACOX3	O15254	700 aa		11.36	□□□□□ -0.59
USP8-209	ENST00000560297	PRKN	O60260	465 aa	Predicted RBP	11.36	□□□□□ -0.59
USP8-209	ENST00000560297	KRT75	O95678	551 aa		11.36	□□□□□ -0.59
USP8-209	ENST00000560297	SFTPC	P11686	197 aa		11.36	□□□□□ -0.59
USP8-209	ENST00000560297	COX4I1	P13073	169 aa		11.36	□□□□□ -0.59
USP8-209	ENST00000560297	CD1E	P15812	388 aa		11.36	□□□□□ -0.59
USP8-209	ENST00000560297	SOX11	P35716	441 aa		11.36	□□□□□ -0.59
USP8-209	ENST00000560297	CHI3L1	P36222	383 aa	Predicted RBP	11.36	□□□□□ -0.59
USP8-209	ENST00000560297	MAGEA8	P43361	318 aa		11.36	□□□□□ -0.59
USP8-209	ENST00000560297	POLE2	P56282	527 aa		11.36	□□□□□ -0.59
USP8-209	ENST00000560297	NRG3	P56975	720 aa		11.36	□□□□□ -0.59
USP8-209	ENST00000560297	DUSP8	Q13202	625 aa		11.36	□□□□□ -0.59
USP8-209	ENST00000560297	TP53BP2	Q13625	1128 aa		11.36	□□□□□ -0.59
USP8-209	ENST00000560297	PAGE3	Q5JUK9	113 aa		11.36	□□□□□ -0.59
USP8-209	ENST00000560297	LRIF1	Q5T3J3	769 aa		11.36	□□□□□ -0.59
USP8-209	ENST00000560297	SAXO2	Q658L1	398 aa		11.36	□□□□□ -0.59
USP8-209	ENST00000560297	FAM91A1	Q658Y4	838 aa		11.36	□□□□□ -0.59
USP8-209	ENST00000560297	MFSD12	Q6NUT3	480 aa		11.36	□□□□□ -0.59
USP8-209	ENST00000560297	SNX32	Q86XE0	403 aa		11.36	□□□□□ -0.59
USP8-209	ENST00000560297	HPS6	Q86YV9	775 aa		11.36	□□□□□ -0.59
USP8-209	ENST00000560297	AMER2	Q8N7J2	671 aa		11.36	□□□□□ -0.59
USP8-209	ENST00000560297	ZNF441	Q8N8Z8	693 aa		11.36	□□□□□ -0.59
USP8-209	ENST00000560297	PCYOX1L	Q8NBM8	494 aa		11.36	□□□□□ -0.59
USP8-209	ENST00000560297	SIMC1	Q8NDZ2	872 aa		11.36	□□□□□ -0.59
USP8-209	ENST00000560297	SLC22A8	Q8TCC7	542 aa		11.36	□□□□□ -0.59
USP8-209	ENST00000560297	TM9SF4	Q92544	642 aa		11.36	□□□□□ -0.59
USP8-209	ENST00000560297	NEURL3	Q96EH8	262 aa		11.36	□□□□□ -0.59
USP8-209	ENST00000560297	HSPBAP1	Q96EW2	488 aa		11.36	□□□□□ -0.59
USP8-209	ENST00000560297	LCOR	Q96JN0	433 aa	Predicted RBP	11.36	□□□□□ -0.59
USP8-209	ENST00000560297	BTBD9	Q96Q07	612 aa		11.36	□□□□□ -0.59
USP8-209	ENST00000560297	GAL3ST4	Q96RP7	486 aa		11.36	□□□□□ -0.59
USP8-209	ENST00000560297	SLC35A5	Q9BS91	424 aa		11.36	□□□□□ -0.59
USP8-209	ENST00000560297	LMF2	Q9BU23	707 aa	Known RBP	11.36	□□□□□ -0.59
USP8-209	ENST00000560297	ACTRT3	Q9BYD9	372 aa		11.36	□□□□□ -0.59
USP8-209	ENST00000560297	PAIP1	Q9H074	479 aa	Known RBP	11.36	□□□□□ -0.59
USP8-209	ENST00000560297	EPS8L2	Q9H6S3	715 aa		11.36	□□□□□ -0.59
USP8-209	ENST00000560297	FOLH1B	Q9HBA9	442 aa		11.36	□□□□□ -0.59
USP8-209	ENST00000560297	GIN1	Q9NXP7	522 aa		11.36	□□□□□ -0.59
USP8-209	ENST00000560297	GPR55	Q9Y2T6	319 aa	Predicted RBP	11.36	□□□□□ -0.59
USP8-209	ENST00000560297	ZNF451	Q9Y4E5	1061 aa		11.36	□□□□□ -0.59
USP8-209	ENST00000560297	PCDHB14	Q9Y5E9	798 aa		11.36	□□□□□ -0.59
USP8-209	ENST00000560297	PCDHGB3	Q9Y5G1	929 aa		11.36	□□□□□ -0.59
USP8-209	ENST00000560297	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		11.35	□□□□□ -0.59
USP8-209	ENST00000560297	FRG2C	A6NGY1	282 aa		11.35	□□□□□ -0.59
USP8-209	ENST00000560297	WWP2	O00308	870 aa		11.35	□□□□□ -0.59
USP8-209	ENST00000560297	T	O15178	435 aa		11.35	□□□□□ -0.59
USP8-209	ENST00000560297	ITGA10	O75578	1167 aa		11.35	□□□□□ -0.59
USP8-209	ENST00000560297	OR2J2	O76002	312 aa		11.35	□□□□□ -0.59
USP8-209	ENST00000560297	HMGN2	P05204	90 aa	Known RBP	11.35	□□□□□ -0.59
USP8-209	ENST00000560297	GSN	P06396	782 aa		11.35	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms