RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 ILKQ13418 452 aa13.6□□□□□ -0.23
RABGGTA-212ENST00000559974 PRAMEF8Q5VWM4 474 aa13.6□□□□□ -0.23
RABGGTA-212ENST00000559974 PRAMEF7Q5VXH5 474 aa13.6□□□□□ -0.23
RABGGTA-212ENST00000559974 PGBD2Q6P3X8 592 aa13.6□□□□□ -0.23
RABGGTA-212ENST00000559974 PTCHD4Q6ZW05 846 aa13.6□□□□□ -0.23
RABGGTA-212ENST00000559974 SLCO6A1Q86UG4 719 aa13.6□□□□□ -0.23
RABGGTA-212ENST00000559974 TRIM73Q86UV7 250 aa13.6□□□□□ -0.23
RABGGTA-212ENST00000559974 STX19Q8N4C7 294 aa13.6□□□□□ -0.23
RABGGTA-212ENST00000559974 SLC15A4Q8N697 577 aa13.6□□□□□ -0.23
RABGGTA-212ENST00000559974 FAM46DQ8NEK8 389 aa13.6□□□□□ -0.23
RABGGTA-212ENST00000559974 NUP43Q8NFH3 380 aa13.6□□□□□ -0.23
RABGGTA-212ENST00000559974 OR9A2Q8NGT5 310 aa13.6□□□□□ -0.23
RABGGTA-212ENST00000559974 SLC7A13Q8TCU3 470 aa13.6□□□□□ -0.23
RABGGTA-212ENST00000559974 RLN3Q8WXF3 142 aa13.6□□□□□ -0.23
RABGGTA-212ENST00000559974 SLC38A4Q969I6 547 aa13.6□□□□□ -0.23
RABGGTA-212ENST00000559974 ELP4Q96EB1 424 aa13.6□□□□□ -0.23
RABGGTA-212ENST00000559974 C16orf58Q96GQ5 468 aa13.6□□□□□ -0.23
RABGGTA-212ENST00000559974 OR2A14Q96R47 310 aa13.6□□□□□ -0.23
RABGGTA-212ENST00000559974 TWSG1Q9GZX9 223 aa13.6□□□□□ -0.23
RABGGTA-212ENST00000559974 C3orf14Q9HBI5 128 aa13.6□□□□□ -0.23
RABGGTA-212ENST00000559974 PALMDQ9NP74 551 aa13.6□□□□□ -0.23
RABGGTA-212ENST00000559974 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.6□□□□□ -0.23
RABGGTA-212ENST00000559974 A0A1W2PRQ8 180 aa13.6□□□□□ -0.23
RABGGTA-212ENST00000559974 CASC3O15234 703 aaKnown RBP13.6□□□□□ -0.23
RABGGTA-212ENST00000559974 EPPINO95925 133 aa13.6□□□□□ -0.23
RABGGTA-212ENST00000559974 LGI1O95970 557 aa13.6□□□□□ -0.23
RABGGTA-212ENST00000559974 STSP08842 583 aa13.6□□□□□ -0.23
RABGGTA-212ENST00000559974 MAGP20916 626 aa13.6□□□□□ -0.23
RABGGTA-212ENST00000559974 AKT2P31751 481 aa13.6□□□□□ -0.23
RABGGTA-212ENST00000559974 NCS1P62166 190 aa13.6□□□□□ -0.23
RABGGTA-212ENST00000559974 ST3GAL4Q11206 333 aa13.6□□□□□ -0.23
RABGGTA-212ENST00000559974 PIN1Q13526 163 aaPredicted RBP13.6□□□□□ -0.23
RABGGTA-212ENST00000559974 TIGD6Q17RP2 521 aa13.6□□□□□ -0.23
RABGGTA-212ENST00000559974 ALG11Q2TAA5 492 aa13.6□□□□□ -0.23
RABGGTA-212ENST00000559974 GPAT3Q53EU6 434 aa13.6□□□□□ -0.23
RABGGTA-212ENST00000559974 FBXO42Q6P3S6 717 aa13.6□□□□□ -0.23
RABGGTA-212ENST00000559974 B3GNT7Q8NFL0 401 aa13.6□□□□□ -0.23
RABGGTA-212ENST00000559974 B4GALNT2Q8NHY0 566 aa13.6□□□□□ -0.23
RABGGTA-212ENST00000559974 PLEKHA8Q96JA3 519 aa13.6□□□□□ -0.23
RABGGTA-212ENST00000559974 OR7D2Q96RA2 312 aa13.6□□□□□ -0.23
RABGGTA-212ENST00000559974 CLN6Q9NWW5 311 aa13.6□□□□□ -0.23
RABGGTA-212ENST00000559974 TRNAU1APQ9NX07 287 aaKnown RBP13.6□□□□□ -0.23
RABGGTA-212ENST00000559974 hCG_2014768A0A024R1R8 64 aa13.59□□□□□ -0.23
RABGGTA-212ENST00000559974 EFCAB10A6NFE3 127 aa13.59□□□□□ -0.23
RABGGTA-212ENST00000559974 K7ESF4 209 aa13.59□□□□□ -0.23
RABGGTA-212ENST00000559974 M0R082 166 aa13.59□□□□□ -0.23
RABGGTA-212ENST00000559974 TNFSF14O43557 240 aa13.59□□□□□ -0.23
RABGGTA-212ENST00000559974 ASNA1O43681 348 aa13.59□□□□□ -0.23
RABGGTA-212ENST00000559974 SLITRK5O94991 958 aa13.59□□□□□ -0.23
RABGGTA-212ENST00000559974 UGT2B7P16662 529 aa13.59□□□□□ -0.23
RABGGTA-212ENST00000559974 LIPAP38571 399 aa13.59□□□□□ -0.23
RABGGTA-212ENST00000559974 BUD31P41223 144 aaPredicted RBP13.59□□□□□ -0.23
RABGGTA-212ENST00000559974 DGKEP52429 567 aa13.59□□□□□ -0.23
RABGGTA-212ENST00000559974 OCA2Q04671 838 aa13.59□□□□□ -0.23
RABGGTA-212ENST00000559974 DGUOKQ16854 277 aa13.59□□□□□ -0.23
RABGGTA-212ENST00000559974 SLX4IPQ5VYV7 408 aa13.59□□□□□ -0.23
RABGGTA-212ENST00000559974 C16orf87Q6PH81 154 aa13.59□□□□□ -0.23
RABGGTA-212ENST00000559974 LINC00299Q6ZSB3 139 aa13.59□□□□□ -0.23
RABGGTA-212ENST00000559974 DGLUCYQ7Z3D6 616 aa13.59□□□□□ -0.23
RABGGTA-212ENST00000559974 SPEM1Q8N4L4 309 aa13.59□□□□□ -0.23
RABGGTA-212ENST00000559974 DYNC2LI1Q8TCX1 351 aa13.59□□□□□ -0.23
RABGGTA-212ENST00000559974 ZNF675Q8TD23 568 aa13.59□□□□□ -0.23
RABGGTA-212ENST00000559974 LGALS12Q96DT0 336 aa13.59□□□□□ -0.23
RABGGTA-212ENST00000559974 TM4SF19Q96DZ7 209 aa13.59□□□□□ -0.23
RABGGTA-212ENST00000559974 OR2A5Q96R48 311 aa13.59□□□□□ -0.23
RABGGTA-212ENST00000559974 FNDC11Q9BVV2 318 aa13.59□□□□□ -0.23
RABGGTA-212ENST00000559974 PINK1Q9BXM7 581 aa13.59□□□□□ -0.23
RABGGTA-212ENST00000559974 ROGDIQ9GZN7 287 aa13.59□□□□□ -0.23
RABGGTA-212ENST00000559974 CNOT2Q9NZN8 540 aaKnown RBP13.59□□□□□ -0.23
RABGGTA-212ENST00000559974 NDOR1Q9UHB4 597 aa13.59□□□□□ -0.23
RABGGTA-212ENST00000559974 KCNE3Q9Y6H6 103 aa13.59□□□□□ -0.23
RABGGTA-212ENST00000559974 TLR4O00206 839 aa13.58□□□□□ -0.24
RABGGTA-212ENST00000559974 NME6O75414 186 aaPredicted RBP13.58□□□□□ -0.24
RABGGTA-212ENST00000559974 SOX14O95416 240 aa13.58□□□□□ -0.24
RABGGTA-212ENST00000559974 ADORA3P0DMS8 318 aa13.58□□□□□ -0.24
RABGGTA-212ENST00000559974 OPRL1P41146 370 aa13.58□□□□□ -0.24
RABGGTA-212ENST00000559974 SERPINB10P48595 397 aa13.58□□□□□ -0.24
RABGGTA-212ENST00000559974 MAN2A2P49641 1150 aa13.58□□□□□ -0.24
RABGGTA-212ENST00000559974 XKP51811 444 aa13.58□□□□□ -0.24
RABGGTA-212ENST00000559974 TNFRSF17Q02223 184 aa13.58□□□□□ -0.24
RABGGTA-212ENST00000559974 TMED1Q13445 227 aa13.58□□□□□ -0.24
RABGGTA-212ENST00000559974 GPR18Q14330 331 aa13.58□□□□□ -0.24
RABGGTA-212ENST00000559974 IRF3Q14653 427 aa13.58□□□□□ -0.24
RABGGTA-212ENST00000559974 SUZ12Q15022 739 aaKnown RBP13.58□□□□□ -0.24
RABGGTA-212ENST00000559974 SYT16Q17RD7 645 aa13.58□□□□□ -0.24
RABGGTA-212ENST00000559974 PODNL1Q6PEZ8 512 aa13.58□□□□□ -0.24
RABGGTA-212ENST00000559974 HMGN2P46Q86SG4 172 aa13.58□□□□□ -0.24
RABGGTA-212ENST00000559974 TRIM48Q8IWZ4 208 aa13.58□□□□□ -0.24
RABGGTA-212ENST00000559974 MAML2Q8IZL2 1156 aaPredicted RBP13.58□□□□□ -0.24
RABGGTA-212ENST00000559974 TSTD1Q8NFU3 115 aa13.58□□□□□ -0.24
RABGGTA-212ENST00000559974 OR6T1Q8NGN1 323 aa13.58□□□□□ -0.24
RABGGTA-212ENST00000559974 RPL3LQ92901 407 aaKnown RBP13.58□□□□□ -0.24
RABGGTA-212ENST00000559974 VMP1Q96GC9 406 aa13.58□□□□□ -0.24
RABGGTA-212ENST00000559974 SH3YL1Q96HL8 342 aaPredicted RBP13.58□□□□□ -0.24
RABGGTA-212ENST00000559974 C10orf90Q96M02 699 aa13.58□□□□□ -0.24
RABGGTA-212ENST00000559974 PRRC1Q96M27 445 aa13.58□□□□□ -0.24
RABGGTA-212ENST00000559974 POLR2J3Q9H1A7 115 aaKnown RBP13.58□□□□□ -0.24
RABGGTA-212ENST00000559974 EQTNQ9NQ60 294 aa13.58□□□□□ -0.24
RABGGTA-212ENST00000559974 PHF11Q9UIL8 331 aa13.58□□□□□ -0.24
RABGGTA-212ENST00000559974 CORINQ9Y5Q5 1042 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms