RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 ELP4Q96EB1 424 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 C10orf90Q96M02 699 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 NECTIN4Q96NY8 510 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 OR7D2Q96RA2 312 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 RPP25Q9BUL9 199 aaKnown RBP7.61□□□□□ -1.19
SMAD3-212ENST00000559937 RSPO3Q9BXY4 272 aaPredicted RBP7.61□□□□□ -1.19
SMAD3-212ENST00000559937 ACTRT3Q9BYD9 372 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 MROQ9BYG7 248 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 PRRG3Q9BZD7 231 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 POLR2J2Q9GZM3 115 aaKnown RBP7.61□□□□□ -1.19
SMAD3-212ENST00000559937 NXF2Q9GZY0 626 aaKnown RBP7.61□□□□□ -1.19
SMAD3-212ENST00000559937 SLC38A1Q9H2H9 487 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 SRMSQ9H3Y6 488 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 EVA1AQ9H8M9 152 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 SIAEQ9HAT2 523 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 GPR83Q9NYM4 423 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 CLEC1BQ9P126 229 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 RHCGQ9UBD6 479 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 TBC1D29Q9UFV1 150 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 FBXW2Q9UKT8 454 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 RPL36Q9Y3U8 105 aaKnown RBP7.61□□□□□ -1.19
SMAD3-212ENST00000559937 ENTPD2Q9Y5L3 495 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 CORINQ9Y5Q5 1042 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 HS3ST3A1Q9Y663 406 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 PMF1-BGLAPU3KQ54 211 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 SCN3AQ9NY46 2000 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 TMEM131Q92545 1883 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 hCG_2014768A0A024R1R8 64 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 POM121BA6NF01 834 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 SAGE2PA6NJ88 616 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 CCRL2O00421 344 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 DLL1O00548 723 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 EPPINO95925 133 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 EGFP01133 1207 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 PTHP01270 115 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 TP53P04637 393 aaPredicted RBP7.6□□□□□ -1.19
SMAD3-212ENST00000559937 ALOX5P09917 674 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 BMP4P12644 408 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 POU2F1P14859 743 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 GADD45AP24522 165 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 ALDH4A1P30038 563 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 MAT2AP31153 395 aaKnown RBP7.6□□□□□ -1.19
SMAD3-212ENST00000559937 TLX1P31314 330 aaPredicted RBP7.6□□□□□ -1.19
SMAD3-212ENST00000559937 CSTF2P33240 577 aaKnown RBP eCLIP7.6□□□□□ -1.19
SMAD3-212ENST00000559937 ACTR1BP42025 376 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 RGS6P49758 472 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 SMSP52788 366 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 PPP5CP53041 499 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 ACTR1AP61163 376 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 BTN3A2P78410 334 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 CDK5Q00535 292 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 DUSP2Q05923 314 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 TARDBPQ13148 414 aaKnown RBP eCLIP7.6□□□□□ -1.194e-8■■■■■ 28.5
SMAD3-212ENST00000559937 TRAM2Q15035 370 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 INAQ16352 499 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 SYT16Q17RD7 645 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 TMEM44Q2T9K0 475 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 ZNF404Q494X3 552 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 GPAT3Q53EU6 434 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 PRRT3Q5FWE3 981 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 EOGTQ5NDL2 527 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 MANEAQ5SRI9 462 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 C18orf63Q68DL7 685 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 CDC73Q6P1J9 531 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 PODNL1Q6PEZ8 512 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 FIGLAQ6QHK4 219 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 ENPP7Q6UWV6 458 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 USP53Q70EK8 1073 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 SZRD1Q7Z422 152 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 LACC1Q8IV20 430 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 CCDC116Q8IYX3 515 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 LRRC25Q8N386 305 aaPredicted RBP7.6□□□□□ -1.19
SMAD3-212ENST00000559937 CAMKVQ8NCB2 501 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 MORN4Q8NDC4 146 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 OR4K5Q8NGD3 323 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 MCFD2Q8NI22 146 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 SLC7A13Q8TCU3 470 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 RPL3LQ92901 407 aaKnown RBP7.6□□□□□ -1.19
SMAD3-212ENST00000559937 UCN3Q969E3 161 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 ABTB1Q969K4 478 aaPredicted RBP7.6□□□□□ -1.19
SMAD3-212ENST00000559937 GIMAP5Q96F15 307 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 MSANTD3Q96H12 275 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 TMEM80Q96HE8 168 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 BMFQ96LC9 184 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 MS4A4EQ96PG1 132 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 OR2A14Q96R47 310 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 MGLLQ99685 303 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 DSN1Q9H410 356 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 ZNF576Q9H609 170 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 CACYBPQ9HB71 228 aaKnown RBP7.6□□□□□ -1.19
SMAD3-212ENST00000559937 LYRM4Q9HD34 91 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 ISYNA1Q9NPH2 558 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 MAN2C1Q9NTJ4 1040 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 MRPS18AQ9NVS2 196 aaKnown RBP7.6□□□□□ -1.19
SMAD3-212ENST00000559937 KLHL28Q9NXS3 571 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 SELENONQ9NZV5 590 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 PTGFRNQ9P2B2 879 aa7.6□□□□□ -1.19
SMAD3-212ENST00000559937 ZNF624Q9P2J8 865 aaPredicted RBP7.6□□□□□ -1.19
SMAD3-212ENST00000559937 SLC13A4Q9UKG4 626 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms