RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 FBXO45P0C2W1 286 aa11.4□□□□□ -0.58
SMAD3-205ENST00000558428 LAMP1P11279 417 aa11.4□□□□□ -0.58
SMAD3-205ENST00000558428 FRKP42685 505 aaPredicted RBP11.4□□□□□ -0.58
SMAD3-205ENST00000558428 GPR85P60893 370 aa11.4□□□□□ -0.58
SMAD3-205ENST00000558428 DCAF7P61962 342 aa11.4□□□□□ -0.58
SMAD3-205ENST00000558428 ZNF155Q12901 538 aaPredicted RBP11.4□□□□□ -0.58
SMAD3-205ENST00000558428 ZNF791Q3KP31 576 aaPredicted RBP11.4□□□□□ -0.58
SMAD3-205ENST00000558428 SLC9B1Q4ZJI4 515 aa11.4□□□□□ -0.58
SMAD3-205ENST00000558428 OGFOD2Q6N063 350 aa11.4□□□□□ -0.58
SMAD3-205ENST00000558428 LYPD8Q6UX82 237 aa11.4□□□□□ -0.58
SMAD3-205ENST00000558428 TMEM64Q6YI46 380 aa11.4□□□□□ -0.58
SMAD3-205ENST00000558428 FAM47EQ6ZV65 393 aa11.4□□□□□ -0.58
SMAD3-205ENST00000558428 MAVSQ7Z434 540 aa11.4□□□□□ -0.58
SMAD3-205ENST00000558428 SPATA19Q7Z5L4 167 aa11.4□□□□□ -0.58
SMAD3-205ENST00000558428 SULF2Q8IWU5 870 aa11.4□□□□□ -0.58
SMAD3-205ENST00000558428 RIMKLAQ8IXN7 391 aa11.4□□□□□ -0.58
SMAD3-205ENST00000558428 DND1Q8IYX4 353 aaKnown RBP11.4□□□□□ -0.58
SMAD3-205ENST00000558428 PRR22Q8IZ63 422 aa11.4□□□□□ -0.58
SMAD3-205ENST00000558428 GOLM1Q8NBJ4 401 aa11.4□□□□□ -0.58
SMAD3-205ENST00000558428 FAM13CQ8NE31 585 aa11.4□□□□□ -0.58
SMAD3-205ENST00000558428 DNAJB8Q8NHS0 232 aa11.4□□□□□ -0.58
SMAD3-205ENST00000558428 NUDT8Q8WV74 236 aa11.4□□□□□ -0.58
SMAD3-205ENST00000558428 ELP4Q96EB1 424 aa11.4□□□□□ -0.58
SMAD3-205ENST00000558428 LCORQ96JN0 433 aaPredicted RBP11.4□□□□□ -0.58
SMAD3-205ENST00000558428 SGCZQ96LD1 299 aa11.4□□□□□ -0.58
SMAD3-205ENST00000558428 MAGEB18Q96M61 343 aa11.4□□□□□ -0.58
SMAD3-205ENST00000558428 DPY30Q9C005 99 aa11.4□□□□□ -0.58
SMAD3-205ENST00000558428 FOLH1BQ9HBA9 442 aa11.4□□□□□ -0.58
SMAD3-205ENST00000558428 OLAHQ9NV23 265 aa11.4□□□□□ -0.58
SMAD3-205ENST00000558428 TAS2R9Q9NYW1 312 aa11.4□□□□□ -0.58
SMAD3-205ENST00000558428 C19orf53Q9UNZ5 99 aaPredicted RBP11.4□□□□□ -0.58
SMAD3-205ENST00000558428 MAPRE3Q9UPY8 281 aa11.4□□□□□ -0.58
SMAD3-205ENST00000558428 NPFFR2Q9Y5X5 522 aa11.4□□□□□ -0.58
SMAD3-205ENST00000558428 USH1CQ9Y6N9 552 aa11.4□□□□□ -0.58
SMAD3-205ENST00000558428 MYO18BQ8IUG5 2567 aa11.39□□□□□ -0.59
SMAD3-205ENST00000558428 A0A1W2PRB8 838 aa11.39□□□□□ -0.59
SMAD3-205ENST00000558428 ASPDHA6ND91 283 aa11.39□□□□□ -0.59
SMAD3-205ENST00000558428 CAPN14A8MX76 684 aa11.39□□□□□ -0.59
SMAD3-205ENST00000558428 KLRC4-KLRK1H3BQV0 150 aa11.39□□□□□ -0.59
SMAD3-205ENST00000558428 UPK1AO00322 258 aa11.39□□□□□ -0.59
SMAD3-205ENST00000558428 ACOX3O15254 700 aa11.39□□□□□ -0.59
SMAD3-205ENST00000558428 PEX1O43933 1283 aa11.39□□□□□ -0.59
SMAD3-205ENST00000558428 DIAPH2O60879 1101 aa11.39□□□□□ -0.59
SMAD3-205ENST00000558428 NME6O75414 186 aaPredicted RBP11.39□□□□□ -0.59
SMAD3-205ENST00000558428 ERN1O75460 977 aaKnown RBP11.39□□□□□ -0.59
SMAD3-205ENST00000558428 WISP1O95388 367 aa11.39□□□□□ -0.59
SMAD3-205ENST00000558428 P04436 131 aa11.39□□□□□ -0.59
SMAD3-205ENST00000558428 ALDOCP09972 364 aaKnown RBP11.39□□□□□ -0.59
SMAD3-205ENST00000558428 CCL3P10147 92 aa11.39□□□□□ -0.59
SMAD3-205ENST00000558428 ABCD3P28288 659 aa11.39□□□□□ -0.59
SMAD3-205ENST00000558428 PPICP45877 212 aa11.39□□□□□ -0.59
SMAD3-205ENST00000558428 TMED10P49755 219 aaKnown RBP11.39□□□□□ -0.59
SMAD3-205ENST00000558428 MEOX1P50221 254 aa11.39□□□□□ -0.59
SMAD3-205ENST00000558428 CDK9P50750 372 aaKnown RBP11.39□□□□□ -0.59
SMAD3-205ENST00000558428 C21orf58P58505 322 aa11.39□□□□□ -0.59
SMAD3-205ENST00000558428 SRSF11Q05519 484 aaKnown RBP11.39□□□□□ -0.59
SMAD3-205ENST00000558428 PGS1Q32NB8 556 aa11.39□□□□□ -0.59
SMAD3-205ENST00000558428 SZRD1Q7Z422 152 aa11.39□□□□□ -0.59
SMAD3-205ENST00000558428 OR2L13Q8N349 312 aa11.39□□□□□ -0.59
SMAD3-205ENST00000558428 CPSF7Q8N684 471 aaKnown RBP11.39□□□□□ -0.59
SMAD3-205ENST00000558428 NATD1Q8N6N6 113 aa11.39□□□□□ -0.59
SMAD3-205ENST00000558428 GALNT11Q8NCW6 608 aa11.39□□□□□ -0.59
SMAD3-205ENST00000558428 OR5M3Q8NGP4 307 aa11.39□□□□□ -0.59
SMAD3-205ENST00000558428 NR4A3Q92570 626 aa11.39□□□□□ -0.59
SMAD3-205ENST00000558428 COQ8BQ96D53 544 aa11.39□□□□□ -0.59
SMAD3-205ENST00000558428 HSPBAP1Q96EW2 488 aa11.39□□□□□ -0.59
SMAD3-205ENST00000558428 MAELQ96JY0 434 aaKnown RBP11.39□□□□□ -0.59
SMAD3-205ENST00000558428 VSTM2LQ96N03 204 aa11.39□□□□□ -0.59
SMAD3-205ENST00000558428 FRMD6Q96NE9 622 aa11.39□□□□□ -0.59
SMAD3-205ENST00000558428 BTBD9Q96Q07 612 aa11.39□□□□□ -0.59
SMAD3-205ENST00000558428 BARD1Q99728 777 aaKnown RBP11.39□□□□□ -0.59
SMAD3-205ENST00000558428 DUSP26Q9BV47 211 aa11.39□□□□□ -0.59
SMAD3-205ENST00000558428 BHLHE41Q9C0J9 482 aaPredicted RBP11.39□□□□□ -0.59
SMAD3-205ENST00000558428 MED4Q9NPJ6 270 aa11.39□□□□□ -0.59
SMAD3-205ENST00000558428 SACM1LQ9NTJ5 587 aa11.39□□□□□ -0.59
SMAD3-205ENST00000558428 AIG1Q9NVV5 245 aa11.39□□□□□ -0.59
SMAD3-205ENST00000558428 GPR55Q9Y2T6 319 aaPredicted RBP11.39□□□□□ -0.59
SMAD3-205ENST00000558428 POLEQ07864 2286 aa11.38□□□□□ -0.59
SMAD3-205ENST00000558428 GTF3C1Q12789 2109 aa11.38□□□□□ -0.59
SMAD3-205ENST00000558428 DNAJC13O75165 2243 aa11.38□□□□□ -0.59
SMAD3-205ENST00000558428 FRG2CA6NGY1 282 aa11.38□□□□□ -0.59
SMAD3-205ENST00000558428 TCP11X1B4DZS4 312 aa11.38□□□□□ -0.59
SMAD3-205ENST00000558428 G3V3Y1 287 aa11.38□□□□□ -0.59
SMAD3-205ENST00000558428 ZNF195O14628 629 aa11.38□□□□□ -0.59
SMAD3-205ENST00000558428 TP53I11O14683 189 aa11.38□□□□□ -0.59
SMAD3-205ENST00000558428 ATP8B1O43520 1251 aa11.38□□□□□ -0.59
SMAD3-205ENST00000558428 C6orf47O95873 294 aa11.38□□□□□ -0.59
SMAD3-205ENST00000558428 IFI6P09912 130 aa11.38□□□□□ -0.59
SMAD3-205ENST00000558428 CNR1P21554 472 aa11.38□□□□□ -0.59
SMAD3-205ENST00000558428 DRD5P21918 477 aa11.38□□□□□ -0.59
SMAD3-205ENST00000558428 GNLYP22749 145 aa11.38□□□□□ -0.59
SMAD3-205ENST00000558428 RFC3P40938 356 aa11.38□□□□□ -0.59
SMAD3-205ENST00000558428 CLNS1AP54105 237 aaKnown RBP11.38□□□□□ -0.59
SMAD3-205ENST00000558428 PRKAG1P54619 331 aa11.38□□□□□ -0.59
SMAD3-205ENST00000558428 NME5P56597 212 aa11.38□□□□□ -0.59
SMAD3-205ENST00000558428 CORO7P57737 925 aa11.38□□□□□ -0.59
SMAD3-205ENST00000558428 FBXW4P57775 412 aa11.38□□□□□ -0.59
SMAD3-205ENST00000558428 ALDH6A1Q02252 535 aaKnown RBP11.38□□□□□ -0.59
SMAD3-205ENST00000558428 PLCXD2Q0VAA5 305 aa11.38□□□□□ -0.59
SMAD3-205ENST00000558428 MLC1Q15049 377 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms