RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 CPSF4LA6NMK7 179 aaKnown RBP16.68■□□□□ 0.26
XRCC3-218ENST00000557439 TFECO14948 347 aaPredicted RBP16.68■□□□□ 0.26
XRCC3-218ENST00000557439 RPA4Q13156 261 aa16.68■□□□□ 0.26
XRCC3-218ENST00000557439 LTB4RQ15722 352 aa16.68■□□□□ 0.26
XRCC3-218ENST00000557439 SHISA5Q8N114 240 aa16.68■□□□□ 0.26
XRCC3-218ENST00000557439 SIMC1Q8NDZ2 872 aa16.68■□□□□ 0.26
XRCC3-218ENST00000557439 SPHK1Q9NYA1 384 aa16.68■□□□□ 0.26
XRCC3-218ENST00000557439 STUB1Q9UNE7 303 aa16.68■□□□□ 0.26
XRCC3-218ENST00000557439 MYO9BQ13459 2157 aa16.68■□□□□ 0.26
XRCC3-218ENST00000557439 A0A087WUU8 490 aa16.68■□□□□ 0.26
XRCC3-218ENST00000557439 A0A1W2PP55 124 aa16.68■□□□□ 0.26
XRCC3-218ENST00000557439 MAN2B1O00754 1011 aa16.68■□□□□ 0.26
XRCC3-218ENST00000557439 ETV6P41212 452 aa16.68■□□□□ 0.26
XRCC3-218ENST00000557439 MAN2A2P49641 1150 aa16.68■□□□□ 0.26
XRCC3-218ENST00000557439 RPS25P62851 125 aaKnown RBP16.68■□□□□ 0.26
XRCC3-218ENST00000557439 PRDX1Q06830 199 aaKnown RBP16.68■□□□□ 0.26
XRCC3-218ENST00000557439 HYAL2Q12891 473 aa16.68■□□□□ 0.26
XRCC3-218ENST00000557439 HNRNPA0Q13151 305 aaKnown RBP16.68■□□□□ 0.26
XRCC3-218ENST00000557439 ARHGAP19Q14CB8 494 aa16.68■□□□□ 0.26
XRCC3-218ENST00000557439 IRF4Q15306 451 aa16.68■□□□□ 0.26
XRCC3-218ENST00000557439 PRICKLE2Q7Z3G6 844 aa16.68■□□□□ 0.26
XRCC3-218ENST00000557439 TMEM145Q8NBT3 493 aa16.68■□□□□ 0.26
XRCC3-218ENST00000557439 KAT2AQ92830 837 aa16.68■□□□□ 0.26
XRCC3-218ENST00000557439 BADQ92934 168 aa16.68■□□□□ 0.26
XRCC3-218ENST00000557439 CAMK1GQ96NX5 476 aa16.68■□□□□ 0.26
XRCC3-218ENST00000557439 QRFPRQ96P65 431 aa16.68■□□□□ 0.26
XRCC3-218ENST00000557439 HOXD1Q9GZZ0 328 aa16.68■□□□□ 0.26
XRCC3-218ENST00000557439 CERS4Q9HA82 394 aa16.68■□□□□ 0.26
XRCC3-218ENST00000557439 ABCB9Q9NP78 766 aa16.68■□□□□ 0.26
XRCC3-218ENST00000557439 SLC6A20Q9NP91 592 aa16.68■□□□□ 0.26
XRCC3-218ENST00000557439 TXNL4BQ9NX01 149 aaKnown RBP16.68■□□□□ 0.26
XRCC3-218ENST00000557439 NDUFB11Q9NX14 153 aa16.68■□□□□ 0.26
XRCC3-218ENST00000557439 KLHL3Q9UH77 587 aa16.68■□□□□ 0.26
XRCC3-218ENST00000557439 A0A1W2PRQ8 180 aa16.67■□□□□ 0.26
XRCC3-218ENST00000557439 ZNF670-ZNF695F2Z2N8 137 aa16.67■□□□□ 0.26
XRCC3-218ENST00000557439 TBX19O60806 448 aa16.67■□□□□ 0.26
XRCC3-218ENST00000557439 SLITRK5O94991 958 aa16.67■□□□□ 0.26
XRCC3-218ENST00000557439 NFATC1O95644 943 aa16.67■□□□□ 0.26
XRCC3-218ENST00000557439 HNRNPA1P09651 372 aaKnown RBP eCLIP16.67■□□□□ 0.26
XRCC3-218ENST00000557439 SOX18P35713 384 aa16.67■□□□□ 0.26
XRCC3-218ENST00000557439 MEDAGQ5VYS4 303 aa16.67■□□□□ 0.26
XRCC3-218ENST00000557439 ARSGQ96EG1 525 aa16.67■□□□□ 0.26
XRCC3-218ENST00000557439 CHFRQ96EP1 664 aa16.67■□□□□ 0.26
XRCC3-218ENST00000557439 FAM46AQ96IP4 442 aaKnown RBP16.67■□□□□ 0.26
XRCC3-218ENST00000557439 NELL2Q99435 816 aa16.67■□□□□ 0.26
XRCC3-218ENST00000557439 POLMQ9NP87 494 aaPredicted RBP16.67■□□□□ 0.26
XRCC3-218ENST00000557439 ACSS1Q9NUB1 689 aaPredicted RBP16.67■□□□□ 0.26
XRCC3-218ENST00000557439 SEC14L4Q9UDX3 406 aa16.67■□□□□ 0.26
XRCC3-218ENST00000557439 HYKKA2RU49 373 aa16.67■□□□□ 0.26
XRCC3-218ENST00000557439 C1QTNF3-AMACRE9PGA6 284 aa16.67■□□□□ 0.26
XRCC3-218ENST00000557439 CCNKO75909 580 aa16.67■□□□□ 0.26
XRCC3-218ENST00000557439 SNX4O95219 450 aa16.67■□□□□ 0.26
XRCC3-218ENST00000557439 AIFM1O95831 613 aa16.67■□□□□ 0.26
XRCC3-218ENST00000557439 MSL3P1P0C860 447 aa16.67■□□□□ 0.26
XRCC3-218ENST00000557439 PPP2R1BP30154 601 aa16.67■□□□□ 0.26
XRCC3-218ENST00000557439 MC3RP41968 323 aa16.67■□□□□ 0.26
XRCC3-218ENST00000557439 RFX2P48378 723 aa16.67■□□□□ 0.26
XRCC3-218ENST00000557439 RORCP51449 518 aa16.67■□□□□ 0.26
XRCC3-218ENST00000557439 CLDN2P57739 230 aa16.67■□□□□ 0.26
XRCC3-218ENST00000557439 DEFA1P59665 94 aa16.67■□□□□ 0.26
XRCC3-218ENST00000557439 DEFA3P59666 94 aa16.67■□□□□ 0.26
XRCC3-218ENST00000557439 COPZ1P61923 177 aa16.67■□□□□ 0.26
XRCC3-218ENST00000557439 CHRNEQ04844 493 aa16.67■□□□□ 0.26
XRCC3-218ENST00000557439 INSL4Q14641 139 aa16.67■□□□□ 0.26
XRCC3-218ENST00000557439 AGBL4Q5VU57 503 aa16.67■□□□□ 0.26
XRCC3-218ENST00000557439 RSBN1Q5VWQ0 802 aaPredicted RBP16.67■□□□□ 0.26
XRCC3-218ENST00000557439 TMPRSS11AQ6ZMR5 421 aa16.67■□□□□ 0.26
XRCC3-218ENST00000557439 GET4Q7L5D6 327 aaPredicted RBP16.67■□□□□ 0.26
XRCC3-218ENST00000557439 KRT73Q86Y46 540 aa16.67■□□□□ 0.26
XRCC3-218ENST00000557439 GATAD2AQ86YP4 633 aa16.67■□□□□ 0.26
XRCC3-218ENST00000557439 ACOT4Q8N9L9 421 aa16.67■□□□□ 0.26
XRCC3-218ENST00000557439 PROKR2Q8NFJ6 384 aa16.67■□□□□ 0.26
XRCC3-218ENST00000557439 OR9A2Q8NGT5 310 aa16.67■□□□□ 0.26
XRCC3-218ENST00000557439 SLC6A17Q9H1V8 727 aa16.67■□□□□ 0.26
XRCC3-218ENST00000557439 MMP28Q9H239 520 aa16.67■□□□□ 0.26
XRCC3-218ENST00000557439 SSR3Q9UNL2 185 aa16.67■□□□□ 0.26
XRCC3-218ENST00000557439 A0A075B6Q4 140 aa16.66■□□□□ 0.26
XRCC3-218ENST00000557439 LINC01553A4QN01 128 aa16.66■□□□□ 0.26
XRCC3-218ENST00000557439 LGI1O95970 557 aa16.66■□□□□ 0.26
XRCC3-218ENST00000557439 MAT2AP31153 395 aaKnown RBP16.66■□□□□ 0.26
XRCC3-218ENST00000557439 SDC2P34741 201 aa16.66■□□□□ 0.26
XRCC3-218ENST00000557439 AVPR1BP47901 424 aa16.66■□□□□ 0.26
XRCC3-218ENST00000557439 OR2B6P58173 313 aa16.66■□□□□ 0.26
XRCC3-218ENST00000557439 ALDH6A1Q02252 535 aaKnown RBP16.66■□□□□ 0.26
XRCC3-218ENST00000557439 KRT33BQ14525 404 aa16.66■□□□□ 0.26
XRCC3-218ENST00000557439 LARS2Q15031 903 aaKnown RBP16.66■□□□□ 0.26
XRCC3-218ENST00000557439 TOR1AIP1Q5JTV8 583 aa16.66■□□□□ 0.26
XRCC3-218ENST00000557439 B3GLCTQ6Y288 498 aa16.66■□□□□ 0.26
XRCC3-218ENST00000557439 LHFPL3Q86UP9 236 aa16.66■□□□□ 0.26
XRCC3-218ENST00000557439 CAMKK1Q8N5S9 505 aa16.66■□□□□ 0.26
XRCC3-218ENST00000557439 PIK3R3Q92569 461 aa16.66■□□□□ 0.26
XRCC3-218ENST00000557439 FGF13Q92913 245 aa16.66■□□□□ 0.26
XRCC3-218ENST00000557439 ARMC5Q96C12 935 aa16.66■□□□□ 0.26
XRCC3-218ENST00000557439 ASB16Q96NS5 453 aa16.66■□□□□ 0.26
XRCC3-218ENST00000557439 DCLRE1CQ96SD1 692 aaKnown RBP16.66■□□□□ 0.26
XRCC3-218ENST00000557439 WDR26Q9H7D7 661 aa16.66■□□□□ 0.26
XRCC3-218ENST00000557439 CRNNQ9UBG3 495 aaPredicted RBP16.66■□□□□ 0.26
XRCC3-218ENST00000557439 SLC9A8Q9Y2E8 581 aa16.66■□□□□ 0.26
XRCC3-218ENST00000557439 DYRK3O43781 588 aa16.66■□□□□ 0.26
XRCC3-218ENST00000557439 APOA1P02647 267 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms