RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, human

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-223	ENST00000557076	PSIP1	O75475	530 aa	Known RBP	4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	MYO1D	O94832	1006 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	SLC16A8	O95907	504 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	GAST	P01350	101 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	CRH	P06850	196 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	CCL3	P10147	92 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	CPN1	P15169	458 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	ALOX12	P18054	663 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	CHM	P24386	653 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	ATP5D	P30049	168 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	UGT2B10	P36537	528 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	PIGA	P37287	484 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	CD79B	P40259	229 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	CDKN2B	P42772	138 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	BDKRB1	P46663	353 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	SLC6A12	P48065	614 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	PNLIPRP1	P54315	467 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	RPS4X	P62701	263 aa	Known RBP	4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	DYNLT1	P63172	113 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	DEFA6	Q01524	100 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	LOXL1	Q08397	574 aa	Predicted RBP	4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	TP53BP2	Q13625	1128 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	RCAN2	Q14206	197 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	GBX1	Q14549	363 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	RPS6KA1	Q15418	735 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	TMEM249	Q2WGJ8	235 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	ZNF791	Q3KP31	576 aa	Predicted RBP	4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	FAM174B	Q3ZCQ3	159 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	C19orf54	Q5BKX5	351 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	PIGG	Q5H8A4	983 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	CYB5R2	Q6BCY4	276 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	ADAM5	Q6NVV9	412 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	ALKBH5	Q6P6C2	394 aa	Known RBP	4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	MFSD7	Q6UXD7	560 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	MICALCL	Q6ZW33	695 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	ASPG	Q86U10	573 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	RFLNB	Q8N5W9	214 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	PPM1N	Q8N819	430 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	ZNF610	Q8N9Z0	462 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	C9orf106	Q8NAJ2	232 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	ZNF740	Q8NDX6	193 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	OR4L1	Q8NH43	312 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	ZFP28	Q8NHY6	868 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	LKAAEAR1	Q8TD35	194 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	PAQR8	Q8TEZ7	354 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	ZNF480	Q8WV37	535 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	ZFAND2B	Q8WV99	257 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	SLC44A1	Q8WWI5	657 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	ASB10	Q8WXI3	467 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	UCN3	Q969E3	161 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	ABTB1	Q969K4	478 aa	Predicted RBP	4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	NCLN	Q969V3	563 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	PANX3	Q96QZ0	392 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	PKP4	Q99569	1192 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	FERMT1	Q9BQL6	677 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	SLC39A3	Q9BRY0	314 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	RHNO1	Q9BSD3	238 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	TMEM204	Q9BSN7	226 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	SLCO5A1	Q9H2Y9	848 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	PROK2	Q9HC23	129 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	PNO1	Q9NRX1	252 aa	Known RBP	4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	FAM114A2	Q9NRY5	505 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	KLHL28	Q9NXS3	571 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	CHMP5	Q9NZZ3	219 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	CNIH4	Q9P003	139 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	ARMCX1	Q9P291	453 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	CTTNBP2NL	Q9P2B4	639 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	MCM8	Q9UJA3	840 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	LAMP3	Q9UQV4	416 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	PCDHA13	Q9Y5I0	950 aa		4.26	□□□□□ -1.73
SCFD1-223	ENST00000557076	NIN	Q8N4C6	2090 aa		4.25	□□□□□ -1.73
SCFD1-223	ENST00000557076	VWF	P04275	2813 aa		4.25	□□□□□ -1.73
SCFD1-223	ENST00000557076		A0A087X0T9	212 aa		4.25	□□□□□ -1.73
SCFD1-223	ENST00000557076		A0A096LNT2	108 aa		4.25	□□□□□ -1.73
SCFD1-223	ENST00000557076	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		4.25	□□□□□ -1.73
SCFD1-223	ENST00000557076	SYNDIG1L	A6NDD5	238 aa		4.25	□□□□□ -1.73
SCFD1-223	ENST00000557076	ZNF860	A6NHJ4	632 aa		4.25	□□□□□ -1.73
SCFD1-223	ENST00000557076	LRRC3C	A6NJW4	275 aa		4.25	□□□□□ -1.73
SCFD1-223	ENST00000557076	GFY	I3L273	518 aa		4.25	□□□□□ -1.73
SCFD1-223	ENST00000557076	PSMD12	O00232	456 aa	Predicted RBP	4.25	□□□□□ -1.73
SCFD1-223	ENST00000557076	TCF21	O43680	179 aa		4.25	□□□□□ -1.73
SCFD1-223	ENST00000557076	OR10H2	O60403	315 aa		4.25	□□□□□ -1.73
SCFD1-223	ENST00000557076	ZNF354A	O60765	605 aa	Predicted RBP	4.25	□□□□□ -1.73
SCFD1-223	ENST00000557076	PRAMEF4	O60810	478 aa		4.25	□□□□□ -1.73
SCFD1-223	ENST00000557076	TNFSF13	O75888	250 aa		4.25	□□□□□ -1.73
SCFD1-223	ENST00000557076	SPDEF	O95238	335 aa		4.25	□□□□□ -1.73
SCFD1-223	ENST00000557076	ACSL3	O95573	720 aa		4.25	□□□□□ -1.73
SCFD1-223	ENST00000557076	GOT2	P00505	430 aa	Known RBP	4.25	□□□□□ -1.73
SCFD1-223	ENST00000557076	S100B	P04271	92 aa	Predicted RBP	4.25	□□□□□ -1.73
SCFD1-223	ENST00000557076	HPN	P05981	417 aa		4.25	□□□□□ -1.73
SCFD1-223	ENST00000557076	H2AFZ	P0C0S5	128 aa		4.25	□□□□□ -1.73
SCFD1-223	ENST00000557076	SLC35G6	P0C7Q6	338 aa		4.25	□□□□□ -1.73
SCFD1-223	ENST00000557076	DANCR	P0C864	163 aa		4.25	□□□□□ -1.73
SCFD1-223	ENST00000557076	FAM228B	P0C875	321 aa		4.25	□□□□□ -1.73
SCFD1-223	ENST00000557076	SMIM10L1	P0DMW3	83 aa		4.25	□□□□□ -1.73
SCFD1-223	ENST00000557076	RNH1	P13489	461 aa	Known RBP	4.25	□□□□□ -1.73
SCFD1-223	ENST00000557076	PECAM1	P16284	738 aa	Predicted RBP	4.25	□□□□□ -1.73
SCFD1-223	ENST00000557076	RPS3	P23396	243 aa	Known RBP eCLIP	4.25	□□□□□ -1.73
SCFD1-223	ENST00000557076	PSMB4	P28070	264 aa		4.25	□□□□□ -1.73
SCFD1-223	ENST00000557076	RBL1	P28749	1068 aa		4.25	□□□□□ -1.73

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