RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 FARSBQ9NSD9 589 aaKnown RBP6.76□□□□□ -1.33
SCFD1-222ENST00000556768 TEX10Q9NXF1 929 aaPredicted RBP6.76□□□□□ -1.33
SCFD1-222ENST00000556768 BCAP29Q9UHQ4 241 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 MID2Q9UJV3 735 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 MAPRE3Q9UPY8 281 aa6.76□□□□□ -1.33
SCFD1-222ENST00000556768 DIDO1Q9BTC0 2240 aaKnown RBP6.75□□□□□ -1.33
SCFD1-222ENST00000556768 ATP6AP2A0A1C7CYW4 349 aa6.75□□□□□ -1.33
SCFD1-222ENST00000556768 WASHC1A8K0Z3 465 aa6.75□□□□□ -1.33
SCFD1-222ENST00000556768 HRKO00198 91 aa6.75□□□□□ -1.33
SCFD1-222ENST00000556768 MANBAO00462 879 aa6.75□□□□□ -1.33
SCFD1-222ENST00000556768 PPP6CO00743 305 aa6.75□□□□□ -1.33
SCFD1-222ENST00000556768 COPEO14579 308 aa6.75□□□□□ -1.33
SCFD1-222ENST00000556768 HCN1O60741 890 aa6.75□□□□□ -1.33
SCFD1-222ENST00000556768 ATP6AP2O75787 350 aa6.75□□□□□ -1.33
SCFD1-222ENST00000556768 BCAS2O75934 225 aaPredicted RBP6.75□□□□□ -1.33
SCFD1-222ENST00000556768 WISP2O76076 250 aa6.75□□□□□ -1.33
SCFD1-222ENST00000556768 SNX4O95219 450 aa6.75□□□□□ -1.33
SCFD1-222ENST00000556768 HOXD4P09016 255 aaPredicted RBP6.75□□□□□ -1.33
SCFD1-222ENST00000556768 CCL3P10147 92 aa6.75□□□□□ -1.33
SCFD1-222ENST00000556768 DRD2P14416 443 aa6.75□□□□□ -1.33
SCFD1-222ENST00000556768 GCAP28676 217 aa6.75□□□□□ -1.33
SCFD1-222ENST00000556768 MPIP34949 423 aa6.75□□□□□ -1.33
SCFD1-222ENST00000556768 FEN1P39748 380 aaKnown RBP6.75□□□□□ -1.33
SCFD1-222ENST00000556768 MAGEA5P43359 124 aa6.75□□□□□ -1.33
SCFD1-222ENST00000556768 GSTM5P46439 218 aa6.75□□□□□ -1.33
SCFD1-222ENST00000556768 MAN2A2P49641 1150 aa6.75□□□□□ -1.33
SCFD1-222ENST00000556768 SMCPP49901 116 aaPredicted RBP6.75□□□□□ -1.33
SCFD1-222ENST00000556768 IFFO1Q0D2I5 559 aa6.75□□□□□ -1.33
SCFD1-222ENST00000556768 EBPQ15125 230 aaKnown RBP6.75□□□□□ -1.33
SCFD1-222ENST00000556768 RPS6KA2Q15349 733 aa6.75□□□□□ -1.33
SCFD1-222ENST00000556768 SF3B4Q15427 424 aaKnown RBP eCLIP6.75□□□□□ -1.332e-7■■■□□ 18
SCFD1-222ENST00000556768 ZNF791Q3KP31 576 aaPredicted RBP6.75□□□□□ -1.33
SCFD1-222ENST00000556768 GXYLT1Q4G148 440 aa6.75□□□□□ -1.33
SCFD1-222ENST00000556768 TMEM201Q5SNT2 666 aa6.75□□□□□ -1.33
SCFD1-222ENST00000556768 WLSQ5T9L3 541 aa6.75□□□□□ -1.33
SCFD1-222ENST00000556768 LRRC25Q8N386 305 aaPredicted RBP6.75□□□□□ -1.33
SCFD1-222ENST00000556768 C1orf52Q8N6N3 182 aaKnown RBP6.75□□□□□ -1.33
SCFD1-222ENST00000556768 C17orf47Q8NEP4 570 aa6.75□□□□□ -1.33
SCFD1-222ENST00000556768 OR10Q1Q8NGQ4 319 aa6.75□□□□□ -1.33
SCFD1-222ENST00000556768 SDCCAG3Q96C92 435 aa6.75□□□□□ -1.33
SCFD1-222ENST00000556768 ZNF837Q96EG3 531 aaPredicted RBP6.75□□□□□ -1.33
SCFD1-222ENST00000556768 L3HYPDHQ96EM0 354 aa6.75□□□□□ -1.33
SCFD1-222ENST00000556768 DTNBP1Q96EV8 351 aa6.75□□□□□ -1.33
SCFD1-222ENST00000556768 TMEM237Q96Q45 408 aa6.75□□□□□ -1.33
SCFD1-222ENST00000556768 SMC6Q96SB8 1091 aa6.75□□□□□ -1.33
SCFD1-222ENST00000556768 SECISBP2Q96T21 854 aaKnown RBP6.75□□□□□ -1.33
SCFD1-222ENST00000556768 HBEGFQ99075 208 aa6.75□□□□□ -1.33
SCFD1-222ENST00000556768 DEPPQ9NTK1 212 aa6.75□□□□□ -1.33
SCFD1-222ENST00000556768 ALKBH4Q9NXW9 302 aa6.75□□□□□ -1.33
SCFD1-222ENST00000556768 SENP1Q9P0U3 644 aa6.75□□□□□ -1.33
SCFD1-222ENST00000556768 PRODH2Q9UF12 536 aa6.75□□□□□ -1.33
SCFD1-222ENST00000556768 UTS2RQ9UKP6 389 aa6.75□□□□□ -1.33
SCFD1-222ENST00000556768 PCDHA9Q9Y5H5 950 aa6.75□□□□□ -1.33
SCFD1-222ENST00000556768 NPFFR2Q9Y5X5 522 aa6.75□□□□□ -1.33
SCFD1-222ENST00000556768 DCHS2Q6V1P9 2916 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 TRGV5A0A0B4J1U4 118 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 SMIM23A6NLE4 172 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 ENO4A6NNW6 628 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 ACOX3O15254 700 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 PCDH7O60245 1069 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 CHEK2O96017 543 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 ATP1B1P05026 303 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 SBK3P0C264 359 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 GABRA1P14867 456 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 NAGAP17050 411 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 KRT4P19013 534 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 EPHA1P21709 976 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 CHRNB4P30926 498 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 SSTR4P31391 388 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 CRHR1P34998 444 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 PTGER4P35408 488 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 GCKP35557 465 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 KRT20P35900 424 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 PIGAP37287 484 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 SLCO1A2P46721 670 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 DNASE1L1P49184 302 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 NAGLUP54802 743 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 DCAF7P61962 342 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 PSPHP78330 225 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 GALNT1Q10472 559 aaPredicted RBP6.74□□□□□ -1.33
SCFD1-222ENST00000556768 FUT7Q11130 342 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 MAP4K2Q12851 820 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 TOMM20Q15388 145 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 NTRK2Q16620 822 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 HYAL4Q2M3T9 481 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 ERCC6LQ2NKX8 1250 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 UNC50Q53HI1 259 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 PRAMEF20Q5VT98 475 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 ZNF585AQ6P3V2 769 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 DGAT2L6Q6ZPD8 337 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 GDF7Q7Z4P5 450 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 TDRPQ86YL5 185 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 MCEMP1Q8IX19 187 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 FBXW8Q8N3Y1 598 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 TMEM251Q8N6I4 163 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 OR10G3Q8NGC4 313 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 RDH11Q8TC12 318 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 DOK4Q8TEW6 326 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 CHTF18Q8WVB6 975 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 TM4SF18Q96CE8 201 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms