RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 MRPS31Q92665 395 aaKnown RBP4.18□□□□□ -1.74
ATXN3-241ENST00000556374 YIPF6Q96EC8 236 aa4.18□□□□□ -1.74
ATXN3-241ENST00000556374 MED8Q96G25 268 aa4.18□□□□□ -1.74
ATXN3-241ENST00000556374 COL21A1Q96P44 957 aa4.18□□□□□ -1.74
ATXN3-241ENST00000556374 FRG2BQ96QU4 278 aa4.18□□□□□ -1.74
ATXN3-241ENST00000556374 PSD2Q9BQI7 771 aa4.18□□□□□ -1.74
ATXN3-241ENST00000556374 DUSP26Q9BV47 211 aa4.18□□□□□ -1.74
ATXN3-241ENST00000556374 GABARAPL3Q9BY60 117 aa4.18□□□□□ -1.74
ATXN3-241ENST00000556374 C6orf62Q9GZU0 229 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-241ENST00000556374 RACGAP1Q9H0H5 632 aa4.18□□□□□ -1.74
ATXN3-241ENST00000556374 LMAN2LQ9H0V9 348 aa4.18□□□□□ -1.74
ATXN3-241ENST00000556374 DCSTAMPQ9H295 470 aa4.18□□□□□ -1.74
ATXN3-241ENST00000556374 MMP27Q9H306 513 aa4.18□□□□□ -1.74
ATXN3-241ENST00000556374 DSN1Q9H410 356 aa4.18□□□□□ -1.74
ATXN3-241ENST00000556374 ZDHHC6Q9H6R6 413 aa4.18□□□□□ -1.74
ATXN3-241ENST00000556374 SP140LQ9H930 580 aa4.18□□□□□ -1.74
ATXN3-241ENST00000556374 SGK2Q9HBY8 427 aa4.18□□□□□ -1.74
ATXN3-241ENST00000556374 MOV10Q9HCE1 1003 aaKnown RBP4.18□□□□□ -1.74
ATXN3-241ENST00000556374 PCDH12Q9NPG4 1184 aa4.18□□□□□ -1.74
ATXN3-241ENST00000556374 ACOT13Q9NPJ3 140 aa4.18□□□□□ -1.74
ATXN3-241ENST00000556374 AASDHPPTQ9NRN7 309 aa4.18□□□□□ -1.74
ATXN3-241ENST00000556374 MRPL17Q9NRX2 175 aaKnown RBP4.18□□□□□ -1.74
ATXN3-241ENST00000556374 FARSBQ9NSD9 589 aaKnown RBP4.18□□□□□ -1.74
ATXN3-241ENST00000556374 EXD2Q9NVH0 621 aa4.18□□□□□ -1.74
ATXN3-241ENST00000556374 MARCH5Q9NX47 278 aa4.18□□□□□ -1.74
ATXN3-241ENST00000556374 SLC25A37Q9NYZ2 338 aa4.18□□□□□ -1.74
ATXN3-241ENST00000556374 CFL2Q9Y281 166 aa4.18□□□□□ -1.74
ATXN3-241ENST00000556374 CCL27Q9Y4X3 112 aa4.18□□□□□ -1.74
ATXN3-241ENST00000556374 PEX16Q9Y5Y5 336 aa4.18□□□□□ -1.74
ATXN3-241ENST00000556374 R4GN57 208 aa4.18□□□□□ -1.74
ATXN3-241ENST00000556374 ZFC3H1O60293 1989 aaKnown RBP4.18□□□□□ -1.74
ATXN3-241ENST00000556374 VWA8A3KMH1 1905 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 FRYQ5TBA9 3013 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 HELZ2Q9BYK8 2649 aaKnown RBP4.17□□□□□ -1.74
ATXN3-241ENST00000556374 KCNE1BA0A087WTH5 132 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 TRAV19A0A0A6YYK7 116 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 GNG14A0A1W2PPG7 69 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 OR2A25A4D2G3 310 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 C5orf58C9J3I9 102 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 TOR1BO14657 336 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 SCAMP2O15127 329 aaKnown RBP4.17□□□□□ -1.74
ATXN3-241ENST00000556374 GRM6O15303 877 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 XPNPEP2O43895 674 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 PCDH7O60245 1069 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 DPM1O60762 260 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 MITFO75030 526 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-241ENST00000556374 ATG13O75143 517 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 SERPINB7O75635 380 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 UPK1BO75841 260 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 PDE9AO76083 593 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 CCNB2O95067 398 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 CLDN7O95471 211 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 KRT75O95678 551 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 CXCL10P02778 98 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 GALTP07902 379 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 DBTP11182 482 aaKnown RBP4.17□□□□□ -1.74
ATXN3-241ENST00000556374 ATP1B2P14415 290 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-241ENST00000556374 ZNF30P17039 623 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 ALOX12P18054 663 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 POLR2EP19388 210 aaKnown RBP4.17□□□□□ -1.74
ATXN3-241ENST00000556374 EFNA1P20827 205 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-241ENST00000556374 PCMT1P22061 227 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 PRKACGP22612 351 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 GCSHP23434 173 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 RRM2P31350 389 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 OR1D2P34982 312 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 CTNNB1P35222 781 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 HNF1BP35680 557 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 GGT2P36268 569 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 GGT5P36269 586 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 POLR2IP36954 125 aaKnown RBP4.17□□□□□ -1.74
ATXN3-241ENST00000556374 NNMTP40261 264 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 PIK3CBP42338 1070 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 CDKN2CP42773 168 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 CRATP43155 626 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 GSSP48637 474 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 IDH2P48735 452 aaKnown RBP4.17□□□□□ -1.74
ATXN3-241ENST00000556374 ALDH9A1P49189 494 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 PRIM2P49643 509 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 PPP5CP53041 499 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 NCS1P62166 190 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 SLC35A2P78381 396 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 ZNF763Q0D2J5 394 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 PPP1R8Q12972 351 aaKnown RBP4.17□□□□□ -1.74
ATXN3-241ENST00000556374 NPRL3Q12980 569 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 MTAPQ13126 283 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 CHIT1Q13231 466 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 AQP6Q13520 282 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 DMC1Q14565 340 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 GPNMBQ14956 572 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 OXA1LQ15070 435 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 CTF1Q16619 201 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 CYP2A13Q16696 494 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 TIGD6Q17RP2 521 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.17□□□□□ -1.74
ATXN3-241ENST00000556374 HKDC1Q2TB90 917 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 PTCHD3Q3KNS1 767 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 ARMCX4Q5H9R4 360 aa4.17□□□□□ -1.74
ATXN3-241ENST00000556374 SYT6Q5T7P8 510 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-241ENST00000556374 UBE2UQ5VVX9 321 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms