RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-223ENST00000556142 C2orf72A6NCS6 295 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 TRIM64A6NGJ6 449 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 C5orf58C9J3I9 102 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 TM4SF5O14894 197 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 DUX1O43812 170 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 HYAL3O43820 417 aaPredicted RBP8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 SLC28A2O43868 658 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 PLOD3O60568 738 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 SEMA7AO75326 666 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 NME6O75414 186 aaPredicted RBP8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 SMNDC1O75940 238 aaKnown RBP eCLIP8.86□□□□□ -0.991e-6■□□□□ 10.8
HNRNPC-223ENST00000556142 DNAJB5O75953 348 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 PDE9AO76083 593 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 ZIC2O95409 532 aaPredicted RBP8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 FESP07332 822 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 CT62P0C5K7 136 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 MSL3P1P0C860 447 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 ETS2P15036 469 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 S1PR1P21453 382 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 FUT4P22083 530 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 KCNAB1Q14722 419 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 CYP27C1Q4G0S4 372 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 TRMT12Q53H54 448 aaKnown RBP8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 KDM4DQ6B0I6 523 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 NIPAL1Q6NVV3 410 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 COMTD1Q86VU5 262 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 PLXDC1Q8IUK5 500 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 FAM181AQ8N9Y4 354 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 OR6C4Q8NGE1 309 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 OR4D11Q8NGI4 311 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 OR4C6Q8NH72 309 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 BBS10Q8TAM1 723 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 SPPL2AQ8TCT8 520 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 GEMIN6Q8WXD5 167 aaKnown RBP8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 PIGKQ92643 395 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 COL26A1Q96A83 441 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 CCDC74AQ96AQ1 378 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 OTUB1Q96FW1 271 aaPredicted RBP8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 AHCYL2Q96HN2 611 aaKnown RBP8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 FBXL20Q96IG2 436 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 TREX2Q9BQ50 279 aaPredicted RBP8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 WFDC6Q9BQY6 131 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 DUSP23Q9BVJ7 150 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 SLC38A1Q9H2H9 487 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 GIN1Q9NXP7 522 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 MAT2BQ9NZL9 334 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 TRPC4Q9UBN4 977 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 KCND3Q9UK17 655 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 PCDHGB3Q9Y5G1 929 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 ENPP4Q9Y6X5 453 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 U3KQV3 271 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 CEP295Q9C0D2 2601 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 ASPMQ8IZT6 3477 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 A0A0G2JPF8 293 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 BLACEA4D250 179 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 DPPA5A6NC42 116 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 HNRNPCL2B2RXH8 293 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 HNRNPCL3B7ZW38 293 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 H0YIG0 161 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 J3KTA2 159 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 FFAR1O14842 300 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 PCDHGA12O60330 932 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 CTNSO60931 367 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 SLITRK5O94991 958 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 CLIC3O95833 236 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 SLC35E2P0CK97 266 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 HNRNPCL4P0DMR1 293 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 NR2F1P10589 423 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 ACP2P11117 423 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 RRM2P31350 389 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 ANXA11P50995 505 aaKnown RBP8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 GTF2A1P52655 376 aaPredicted RBP8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 CRISP3P54108 245 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 HSD11B2P80365 405 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 MAT1AQ00266 395 aaKnown RBP8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 KCNC4Q03721 635 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 MAP4K2Q12851 820 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 DUSP8Q13202 625 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 LAPTM4AQ15012 233 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 SF3A2Q15428 464 aaKnown RBP8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 ZIK1Q3SY52 487 aaPredicted RBP8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 AMZ1Q400G9 498 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 PERM1Q5SV97 790 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 AP1ARQ63HQ0 302 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 FAHD1Q6P587 224 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 ZNF574Q6ZN55 896 aaPredicted RBP8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 TMPRSS9Q7Z410 1059 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 LACC1Q8IV20 430 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 SLC44A2Q8IWA5 706 aaPredicted RBP8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 Q8N9G6 341 aaPredicted RBP8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 TTC29Q8NA56 475 aaPredicted RBP8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 KDF1Q8NAX2 398 aaPredicted RBP8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 SLC16A11Q8NCK7 471 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 ZNF354BQ96LW1 612 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 MS4A4EQ96PG1 132 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 TRNT1Q96Q11 434 aaKnown RBP8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 BTBD2Q9BX70 525 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 TOR3AQ9H497 397 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 REEP1Q9H902 201 aa8.86□□□□□ -0.99
HNRNPC-223ENST00000556142 PNPLA3Q9NST1 481 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms