RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 BCAP29Q9UHQ4 241 aa18.02■□□□□ 0.48
PRKCH-219ENST00000555906 DMGDHQ9UI17 866 aaKnown RBP18.02■□□□□ 0.48
PRKCH-219ENST00000555906 PSME2Q9UL46 239 aa18.02■□□□□ 0.48
PRKCH-219ENST00000555906 CAMK2AQ9UQM7 478 aa18.02■□□□□ 0.48
PRKCH-219ENST00000555906 PLLPQ9Y342 182 aa18.02■□□□□ 0.48
PRKCH-219ENST00000555906 SLC6A5Q9Y345 797 aa18.02■□□□□ 0.48
PRKCH-219ENST00000555906 A0A087WUV0 522 aaPredicted RBP18.01■□□□□ 0.47
PRKCH-219ENST00000555906 MBD3L4A6NDZ8 208 aaPredicted RBP18.01■□□□□ 0.47
PRKCH-219ENST00000555906 MBD3L3A6NE82 208 aaPredicted RBP18.01■□□□□ 0.47
PRKCH-219ENST00000555906 MBD3L5A6NJ08 208 aaPredicted RBP18.01■□□□□ 0.47
PRKCH-219ENST00000555906 CD8B2A6NJW9 211 aa18.01■□□□□ 0.47
PRKCH-219ENST00000555906 POC1B-GALNT4F8VUJ3 575 aa18.01■□□□□ 0.47
PRKCH-219ENST00000555906 PPP6CO00743 305 aa18.01■□□□□ 0.47
PRKCH-219ENST00000555906 SNPHO15079 494 aa18.01■□□□□ 0.47
PRKCH-219ENST00000555906 CBX7O95931 251 aa18.01■□□□□ 0.47
PRKCH-219ENST00000555906 HSD3B1P14060 373 aa18.01■□□□□ 0.47
PRKCH-219ENST00000555906 BMP7P18075 431 aa18.01■□□□□ 0.47
PRKCH-219ENST00000555906 HSD3B2P26439 372 aa18.01■□□□□ 0.47
PRKCH-219ENST00000555906 SOX18P35713 384 aa18.01■□□□□ 0.47
PRKCH-219ENST00000555906 FEN1P39748 380 aaKnown RBP18.01■□□□□ 0.47
PRKCH-219ENST00000555906 ZNF136P52737 540 aa18.01■□□□□ 0.47
PRKCH-219ENST00000555906 CDH13P55290 713 aa18.01■□□□□ 0.47
PRKCH-219ENST00000555906 DCAF7P61962 342 aa18.01■□□□□ 0.47
PRKCH-219ENST00000555906 SNTA1Q13424 505 aa18.01■□□□□ 0.47
PRKCH-219ENST00000555906 EXOSC7Q15024 291 aaKnown RBP18.01■□□□□ 0.47
PRKCH-219ENST00000555906 TOMM20Q15388 145 aa18.01■□□□□ 0.47
PRKCH-219ENST00000555906 EIPR1Q53HC9 387 aa18.01■□□□□ 0.47
PRKCH-219ENST00000555906 DCST1Q5T197 706 aa18.01■□□□□ 0.47
PRKCH-219ENST00000555906 SLC30A6Q6NXT4 461 aa18.01■□□□□ 0.47
PRKCH-219ENST00000555906 POMZP3Q6PJE2 187 aa18.01■□□□□ 0.47
PRKCH-219ENST00000555906 NUP54Q7Z3B4 507 aa18.01■□□□□ 0.47
PRKCH-219ENST00000555906 TMEM151AQ8N4L1 468 aa18.01■□□□□ 0.47
PRKCH-219ENST00000555906 C1orf52Q8N6N3 182 aaKnown RBP18.01■□□□□ 0.47
PRKCH-219ENST00000555906 NOA1Q8NC60 698 aaKnown RBP18.01■□□□□ 0.47
PRKCH-219ENST00000555906 OR1J4Q8NGS1 313 aa18.01■□□□□ 0.47
PRKCH-219ENST00000555906 MBD3L2Q8NHZ7 208 aaPredicted RBP18.01■□□□□ 0.47
PRKCH-219ENST00000555906 GPATCH1Q9BRR8 931 aaKnown RBP18.01■□□□□ 0.47
PRKCH-219ENST00000555906 POLDIP3Q9BY77 421 aaKnown RBP18.01■□□□□ 0.47
PRKCH-219ENST00000555906 PRODH2Q9UF12 536 aa18.01■□□□□ 0.47
PRKCH-219ENST00000555906 ZNF225Q9UK10 706 aa18.01■□□□□ 0.47
PRKCH-219ENST00000555906 FAM221AA4D161 298 aa18■□□□□ 0.47
PRKCH-219ENST00000555906 GNB5O14775 395 aa18■□□□□ 0.47
PRKCH-219ENST00000555906 SNRPAP09012 282 aaKnown RBP18■□□□□ 0.47
PRKCH-219ENST00000555906 TSPAN8P19075 237 aa18■□□□□ 0.47
PRKCH-219ENST00000555906 PTGDSP41222 190 aa18■□□□□ 0.47
PRKCH-219ENST00000555906 CLCQ05315 142 aa18■□□□□ 0.47
PRKCH-219ENST00000555906 DUSP2Q05923 314 aa18■□□□□ 0.47
PRKCH-219ENST00000555906 CSTF3Q12996 717 aaKnown RBP18■□□□□ 0.47
PRKCH-219ENST00000555906 RASA2Q15283 850 aa18■□□□□ 0.47
PRKCH-219ENST00000555906 WIPI1Q5MNZ9 446 aaPredicted RBP18■□□□□ 0.47
PRKCH-219ENST00000555906 ANGPTL8Q6UXH0 198 aa18■□□□□ 0.47
PRKCH-219ENST00000555906 FAM83FQ8NEG4 500 aaPredicted RBP18■□□□□ 0.47
PRKCH-219ENST00000555906 OR52R1Q8NGF1 315 aa18■□□□□ 0.47
PRKCH-219ENST00000555906 ZNF675Q8TD23 568 aa18■□□□□ 0.47
PRKCH-219ENST00000555906 FAM222BQ8WU58 562 aa18■□□□□ 0.47
PRKCH-219ENST00000555906 IFT81Q8WYA0 676 aa18■□□□□ 0.47
PRKCH-219ENST00000555906 ABTB1Q969K4 478 aaPredicted RBP18■□□□□ 0.47
PRKCH-219ENST00000555906 CNRIP1Q96F85 164 aaPredicted RBP18■□□□□ 0.47
PRKCH-219ENST00000555906 WDYHV1Q96HA8 205 aa18■□□□□ 0.47
PRKCH-219ENST00000555906 ZNF681Q96N22 645 aa18■□□□□ 0.47
PRKCH-219ENST00000555906 NODALQ96S42 347 aa18■□□□□ 0.47
PRKCH-219ENST00000555906 HBEGFQ99075 208 aa18■□□□□ 0.47
PRKCH-219ENST00000555906 CXXC4Q9H2H0 198 aa18■□□□□ 0.47
PRKCH-219ENST00000555906 CLEC4MQ9H2X3 399 aaPredicted RBP18■□□□□ 0.47
PRKCH-219ENST00000555906 RASSF1Q9NS23 344 aa18■□□□□ 0.47
PRKCH-219ENST00000555906 KLRF1Q9NZS2 232 aa18■□□□□ 0.47
PRKCH-219ENST00000555906 VPS29Q9UBQ0 182 aa18■□□□□ 0.47
PRKCH-219ENST00000555906 MCM8Q9UJA3 840 aa18■□□□□ 0.47
PRKCH-219ENST00000555906 ZNF780BQ9Y6R6 833 aa18■□□□□ 0.47
PRKCH-219ENST00000555906 FRG2CA6NGY1 282 aa17.99■□□□□ 0.47
PRKCH-219ENST00000555906 TO15178 435 aa17.99■□□□□ 0.47
PRKCH-219ENST00000555906 OR4F21O95013 312 aa17.99■□□□□ 0.47
PRKCH-219ENST00000555906 ACTL6AO96019 429 aa17.99■□□□□ 0.47
PRKCH-219ENST00000555906 KRT6AP02538 564 aa17.99■□□□□ 0.47
PRKCH-219ENST00000555906 KRT6BP04259 564 aa17.99■□□□□ 0.47
PRKCH-219ENST00000555906 GCKP35557 465 aa17.99■□□□□ 0.47
PRKCH-219ENST00000555906 HSD17B3P37058 310 aa17.99■□□□□ 0.47
PRKCH-219ENST00000555906 KRT6CP48668 564 aa17.99■□□□□ 0.47
PRKCH-219ENST00000555906 ALDH9A1P49189 494 aa17.99■□□□□ 0.47
PRKCH-219ENST00000555906 IST1P53990 364 aa17.99■□□□□ 0.47
PRKCH-219ENST00000555906 SNTB1Q13884 538 aaKnown RBP17.99■□□□□ 0.47
PRKCH-219ENST00000555906 LTB4RQ15722 352 aa17.99■□□□□ 0.47
PRKCH-219ENST00000555906 LCA5Q86VQ0 697 aa17.99■□□□□ 0.47
PRKCH-219ENST00000555906 ADCY4Q8NFM4 1077 aa17.99■□□□□ 0.47
PRKCH-219ENST00000555906 ERP27Q96DN0 273 aa17.99■□□□□ 0.47
PRKCH-219ENST00000555906 RMND5BQ96G75 393 aaPredicted RBP17.99■□□□□ 0.47
PRKCH-219ENST00000555906 TRIB1Q96RU8 372 aa17.99■□□□□ 0.47
PRKCH-219ENST00000555906 ZNF382Q96SR6 550 aa17.99■□□□□ 0.47
PRKCH-219ENST00000555906 FOXC2Q99958 501 aa17.99■□□□□ 0.47
PRKCH-219ENST00000555906 CALHM2Q9HA72 323 aa17.99■□□□□ 0.47
PRKCH-219ENST00000555906 GALNT9Q9HCQ5 603 aa17.99■□□□□ 0.47
PRKCH-219ENST00000555906 UTS2RQ9UKP6 389 aa17.99■□□□□ 0.47
PRKCH-219ENST00000555906 MAP1AP78559 2803 aaPredicted RBP17.98■□□□□ 0.47
PRKCH-219ENST00000555906 EXOC1LA0A1B0GW35 172 aa17.98■□□□□ 0.47
PRKCH-219ENST00000555906 PRAMEF25A6NGN4 478 aa17.98■□□□□ 0.47
PRKCH-219ENST00000555906 A6NNC1 897 aa17.98■□□□□ 0.47
PRKCH-219ENST00000555906 MANBAO00462 879 aa17.98■□□□□ 0.47
PRKCH-219ENST00000555906 UGT2B11O75310 529 aa17.98■□□□□ 0.47
PRKCH-219ENST00000555906 ABHD2P08910 425 aa17.98■□□□□ 0.47
PRKCH-219ENST00000555906 PCSK2P16519 638 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms