RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 MID1IP1Q9NPA3 183 aa12.66□□□□□ -0.38
PCNX4-209ENST00000555569 KCNJ16Q9NPI9 418 aa12.66□□□□□ -0.38
PCNX4-209ENST00000555569 ALKBH4Q9NXW9 302 aa12.66□□□□□ -0.38
PCNX4-209ENST00000555569 PRODH2Q9UF12 536 aa12.66□□□□□ -0.38
PCNX4-209ENST00000555569 PLLPQ9Y342 182 aa12.66□□□□□ -0.38
PCNX4-209ENST00000555569 CSMD1Q96PZ7 3565 aa12.65□□□□□ -0.38
PCNX4-209ENST00000555569 SERTM1A2A2V5 107 aa12.65□□□□□ -0.38
PCNX4-209ENST00000555569 FOXO6A8MYZ6 492 aa12.65□□□□□ -0.38
PCNX4-209ENST00000555569 G3V2L1 256 aa12.65□□□□□ -0.38
PCNX4-209ENST00000555569 ACOX3O15254 700 aa12.65□□□□□ -0.38
PCNX4-209ENST00000555569 CDH16O75309 829 aa12.65□□□□□ -0.38
PCNX4-209ENST00000555569 PPM1BO75688 479 aa12.65□□□□□ -0.38
PCNX4-209ENST00000555569 TOXO94900 526 aa12.65□□□□□ -0.38
PCNX4-209ENST00000555569 PROCP04070 461 aa12.65□□□□□ -0.38
PCNX4-209ENST00000555569 ABCB1P08183 1280 aaPredicted RBP12.65□□□□□ -0.38
PCNX4-209ENST00000555569 NAGAP17050 411 aa12.65□□□□□ -0.38
PCNX4-209ENST00000555569 TIA1P31483 386 aaKnown RBP eCLIP12.65□□□□□ -0.38
PCNX4-209ENST00000555569 CASP3P42574 277 aa12.65□□□□□ -0.38
PCNX4-209ENST00000555569 SLCO1A2P46721 670 aa12.65□□□□□ -0.38
PCNX4-209ENST00000555569 NAA20P61599 178 aa12.65□□□□□ -0.38
PCNX4-209ENST00000555569 DCAF7P61962 342 aa12.65□□□□□ -0.38
PCNX4-209ENST00000555569 TFF3Q07654 80 aa12.65□□□□□ -0.38
PCNX4-209ENST00000555569 HEPACAMQ14CZ8 416 aa12.65□□□□□ -0.38
PCNX4-209ENST00000555569 TRMT12Q53H54 448 aaKnown RBP12.65□□□□□ -0.38
PCNX4-209ENST00000555569 SH2D5Q6ZV89 423 aa12.65□□□□□ -0.38
PCNX4-209ENST00000555569 PACS2Q86VP3 889 aa12.65□□□□□ -0.38
PCNX4-209ENST00000555569 TDRPQ86YL5 185 aa12.65□□□□□ -0.38
PCNX4-209ENST00000555569 CCDC116Q8IYX3 515 aa12.65□□□□□ -0.38
PCNX4-209ENST00000555569 SAMD14Q8IZD0 417 aaPredicted RBP12.65□□□□□ -0.38
PCNX4-209ENST00000555569 SIMC1Q8NDZ2 872 aa12.65□□□□□ -0.38
PCNX4-209ENST00000555569 ZNF675Q8TD23 568 aa12.65□□□□□ -0.38
PCNX4-209ENST00000555569 EXOSC8Q96B26 276 aaKnown RBP12.65□□□□□ -0.38
PCNX4-209ENST00000555569 OMA1Q96E52 524 aa12.65□□□□□ -0.38
PCNX4-209ENST00000555569 HSPBAP1Q96EW2 488 aa12.65□□□□□ -0.38
PCNX4-209ENST00000555569 C14orf79Q96F83 325 aa12.65□□□□□ -0.38
PCNX4-209ENST00000555569 EBPLQ9BY08 206 aa12.65□□□□□ -0.38
PCNX4-209ENST00000555569 METTL7AQ9H8H3 244 aa12.65□□□□□ -0.38
PCNX4-209ENST00000555569 PPCSQ9HAB8 311 aa12.65□□□□□ -0.38
PCNX4-209ENST00000555569 GIMAP4Q9NUV9 329 aa12.65□□□□□ -0.38
PCNX4-209ENST00000555569 PCDHGB3Q9Y5G1 929 aa12.65□□□□□ -0.38
PCNX4-209ENST00000555569 POLQO75417 2590 aa12.65□□□□□ -0.39
PCNX4-209ENST00000555569 MED12Q93074 2177 aa12.64□□□□□ -0.39
PCNX4-209ENST00000555569 C15orf38-AP3S2A0A0A6YYH1 394 aa12.64□□□□□ -0.39
PCNX4-209ENST00000555569 SMIM23A6NLE4 172 aa12.64□□□□□ -0.39
PCNX4-209ENST00000555569 H3BQF6 201 aa12.64□□□□□ -0.39
PCNX4-209ENST00000555569 UBFD1O14562 309 aaKnown RBP12.64□□□□□ -0.39
PCNX4-209ENST00000555569 PLIN3O60664 434 aa12.64□□□□□ -0.39
PCNX4-209ENST00000555569 TRAPPC6AO75865 159 aa12.64□□□□□ -0.39
PCNX4-209ENST00000555569 BCAS2O75934 225 aaPredicted RBP12.64□□□□□ -0.39
PCNX4-209ENST00000555569 CRHR1P34998 444 aa12.64□□□□□ -0.39
PCNX4-209ENST00000555569 PPICP45877 212 aa12.64□□□□□ -0.39
PCNX4-209ENST00000555569 ZFP36L2P47974 494 aaKnown RBP12.64□□□□□ -0.39
PCNX4-209ENST00000555569 CCT5P48643 541 aa12.64□□□□□ -0.39
PCNX4-209ENST00000555569 EMDP50402 254 aa12.64□□□□□ -0.39
PCNX4-209ENST00000555569 CDK9P50750 372 aaKnown RBP12.64□□□□□ -0.39
PCNX4-209ENST00000555569 FOXA1P55317 472 aa12.64□□□□□ -0.39
PCNX4-209ENST00000555569 MRPS35P82673 323 aaKnown RBP12.64□□□□□ -0.39
PCNX4-209ENST00000555569 PLCXD2Q0VAA5 305 aa12.64□□□□□ -0.39
PCNX4-209ENST00000555569 CCDC153Q494R4 210 aa12.64□□□□□ -0.39
PCNX4-209ENST00000555569 ZNF628Q5EBL2 1059 aa12.64□□□□□ -0.39
PCNX4-209ENST00000555569 SPDYAQ5MJ70 313 aa12.64□□□□□ -0.39
PCNX4-209ENST00000555569 FNDC7Q5VTL7 733 aa12.64□□□□□ -0.39
PCNX4-209ENST00000555569 TMEM81Q6P7N7 255 aa12.64□□□□□ -0.39
PCNX4-209ENST00000555569 GALNT18Q6P9A2 607 aa12.64□□□□□ -0.39
PCNX4-209ENST00000555569 FRMD7Q6ZUT3 714 aa12.64□□□□□ -0.39
PCNX4-209ENST00000555569 NUP54Q7Z3B4 507 aa12.64□□□□□ -0.39
PCNX4-209ENST00000555569 HGDQ93099 445 aa12.64□□□□□ -0.39
PCNX4-209ENST00000555569 NTNG2Q96CW9 530 aa12.64□□□□□ -0.39
PCNX4-209ENST00000555569 C11orf24Q96F05 449 aaPredicted RBP12.64□□□□□ -0.39
PCNX4-209ENST00000555569 TMEM41AQ96HV5 264 aa12.64□□□□□ -0.39
PCNX4-209ENST00000555569 GNRHR2Q96P88 292 aa12.64□□□□□ -0.39
PCNX4-209ENST00000555569 UBQLN3Q9H347 655 aa12.64□□□□□ -0.39
PCNX4-209ENST00000555569 SLC35C2Q9NQQ7 365 aa12.64□□□□□ -0.39
PCNX4-209ENST00000555569 NPDC1Q9NQX5 325 aaPredicted RBP12.64□□□□□ -0.39
PCNX4-209ENST00000555569 SIRT5Q9NXA8 310 aa12.64□□□□□ -0.39
PCNX4-209ENST00000555569 GRID1Q9ULK0 1009 aa12.64□□□□□ -0.39
PCNX4-209ENST00000555569 C15orf41Q9Y2V0 281 aa12.64□□□□□ -0.39
PCNX4-209ENST00000555569 PDZD2O15018 2839 aa12.64□□□□□ -0.39
PCNX4-209ENST00000555569 CCDC168Q8NDH2 2452 aa12.64□□□□□ -0.39
PCNX4-209ENST00000555569 A0A0G2JNJ9 132 aa12.63□□□□□ -0.39
PCNX4-209ENST00000555569 FRG2CA6NGY1 282 aa12.63□□□□□ -0.39
PCNX4-209ENST00000555569 FAM47E-STBD1D6RA91 191 aa12.63□□□□□ -0.39
PCNX4-209ENST00000555569 GNB5O14775 395 aa12.63□□□□□ -0.39
PCNX4-209ENST00000555569 TO15178 435 aa12.63□□□□□ -0.39
PCNX4-209ENST00000555569 CRCPO75575 148 aa12.63□□□□□ -0.39
PCNX4-209ENST00000555569 HPNP05981 417 aa12.63□□□□□ -0.39
PCNX4-209ENST00000555569 ANXA4P09525 319 aaPredicted RBP12.63□□□□□ -0.39
PCNX4-209ENST00000555569 IGFBP2P18065 325 aa12.63□□□□□ -0.39
PCNX4-209ENST00000555569 DRD5P21918 477 aa12.63□□□□□ -0.39
PCNX4-209ENST00000555569 MSX1P28360 303 aa12.63□□□□□ -0.39
PCNX4-209ENST00000555569 ADH7P40394 386 aa12.63□□□□□ -0.39
PCNX4-209ENST00000555569 GSTM5P46439 218 aa12.63□□□□□ -0.39
PCNX4-209ENST00000555569 NAGLUP54802 743 aa12.63□□□□□ -0.39
PCNX4-209ENST00000555569 DNAJB13P59910 316 aa12.63□□□□□ -0.39
PCNX4-209ENST00000555569 IMPG1Q17R60 797 aa12.63□□□□□ -0.39
PCNX4-209ENST00000555569 ERCC6LQ2NKX8 1250 aa12.63□□□□□ -0.39
PCNX4-209ENST00000555569 CFAP157Q5JU67 520 aa12.63□□□□□ -0.39
PCNX4-209ENST00000555569 LCE2DQ5TA82 110 aaPredicted RBP12.63□□□□□ -0.39
PCNX4-209ENST00000555569 RIPPLY2Q5TAB7 128 aa12.63□□□□□ -0.39
PCNX4-209ENST00000555569 TIGD3Q6B0B8 471 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms