RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 RAPSNQ13702 412 aa13.24□□□□□ -0.29
CHD8-208ENST00000555301 TLR1Q15399 786 aa13.24□□□□□ -0.29
CHD8-208ENST00000555301 ZNHIT3Q15649 155 aaPredicted RBP13.24□□□□□ -0.29
CHD8-208ENST00000555301 COQ5Q5HYK3 327 aa13.24□□□□□ -0.29
CHD8-208ENST00000555301 ACER2Q5QJU3 275 aa13.24□□□□□ -0.29
CHD8-208ENST00000555301 TCTN3Q6NUS6 607 aa13.24□□□□□ -0.29
CHD8-208ENST00000555301 SLC2A7Q6PXP3 512 aa13.24□□□□□ -0.29
CHD8-208ENST00000555301 ZNF621Q6ZSS3 439 aa13.24□□□□□ -0.29
CHD8-208ENST00000555301 CDRT4Q8N9R6 151 aa13.24□□□□□ -0.29
CHD8-208ENST00000555301 RP9Q8TA86 221 aaKnown RBP13.24□□□□□ -0.29
CHD8-208ENST00000555301 THAP3Q8WTV1 239 aaPredicted RBP13.24□□□□□ -0.29
CHD8-208ENST00000555301 TM9SF4Q92544 642 aa13.24□□□□□ -0.29
CHD8-208ENST00000555301 ADIPOR1Q96A54 375 aa13.24□□□□□ -0.29
CHD8-208ENST00000555301 VSTM2LQ96N03 204 aa13.24□□□□□ -0.29
CHD8-208ENST00000555301 LMF1Q96S06 567 aa13.24□□□□□ -0.29
CHD8-208ENST00000555301 SMAD5Q99717 465 aaKnown RBP13.24□□□□□ -0.29
CHD8-208ENST00000555301 INPP5KQ9BT40 448 aa13.24□□□□□ -0.29
CHD8-208ENST00000555301 ITPAQ9BY32 194 aa13.24□□□□□ -0.29
CHD8-208ENST00000555301 ADNPQ9H2P0 1102 aa13.24□□□□□ -0.29
CHD8-208ENST00000555301 EPS8L2Q9H6S3 715 aa13.24□□□□□ -0.29
CHD8-208ENST00000555301 FOLH1BQ9HBA9 442 aa13.24□□□□□ -0.29
CHD8-208ENST00000555301 STMN3Q9NZ72 180 aa13.24□□□□□ -0.29
CHD8-208ENST00000555301 TUBD1Q9UJT1 453 aa13.24□□□□□ -0.29
CHD8-208ENST00000555301 ERVK-11Q9UQG0 969 aa13.24□□□□□ -0.29
CHD8-208ENST00000555301 YARS2Q9Y2Z4 477 aaKnown RBP13.24□□□□□ -0.29
CHD8-208ENST00000555301 CFAP47Q6ZTR5 3102 aa13.23□□□□□ -0.29
CHD8-208ENST00000555301 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.23□□□□□ -0.29
CHD8-208ENST00000555301 A0A096LPI6 279 aa13.23□□□□□ -0.29
CHD8-208ENST00000555301 ASPDHA6ND91 283 aa13.23□□□□□ -0.29
CHD8-208ENST00000555301 TMEM200CA6NKL6 621 aa13.23□□□□□ -0.29
CHD8-208ENST00000555301 ERN1O75460 977 aaKnown RBP13.23□□□□□ -0.29
CHD8-208ENST00000555301 ITGA10O75578 1167 aa13.23□□□□□ -0.29
CHD8-208ENST00000555301 SOX30O94993 753 aa13.23□□□□□ -0.29
CHD8-208ENST00000555301 KCNH1O95259 989 aa13.23□□□□□ -0.29
CHD8-208ENST00000555301 HMGN2P05204 90 aaKnown RBP13.23□□□□□ -0.29
CHD8-208ENST00000555301 KRT16P08779 473 aa13.23□□□□□ -0.29
CHD8-208ENST00000555301 DRD5P21918 477 aa13.23□□□□□ -0.29
CHD8-208ENST00000555301 PPICP45877 212 aa13.23□□□□□ -0.29
CHD8-208ENST00000555301 NRG3P56975 720 aa13.23□□□□□ -0.29
CHD8-208ENST00000555301 ZNF155Q12901 538 aaPredicted RBP13.23□□□□□ -0.29
CHD8-208ENST00000555301 KCNAB2Q13303 367 aa13.23□□□□□ -0.29
CHD8-208ENST00000555301 MFAP5Q13361 173 aa13.23□□□□□ -0.29
CHD8-208ENST00000555301 TP53BP2Q13625 1128 aa13.23□□□□□ -0.29
CHD8-208ENST00000555301 CYLC2Q14093 348 aaPredicted RBP13.23□□□□□ -0.29
CHD8-208ENST00000555301 LINC00303Q3SY05 128 aa13.23□□□□□ -0.29
CHD8-208ENST00000555301 MMEL1Q495T6 779 aa13.23□□□□□ -0.29
CHD8-208ENST00000555301 B3GNTL1Q67FW5 361 aaPredicted RBP13.23□□□□□ -0.29
CHD8-208ENST00000555301 FCRLBQ6BAA4 426 aa13.23□□□□□ -0.29
CHD8-208ENST00000555301 MFSD12Q6NUT3 480 aa13.23□□□□□ -0.29
CHD8-208ENST00000555301 HPS6Q86YV9 775 aa13.23□□□□□ -0.29
CHD8-208ENST00000555301 TAGAPQ8N103 731 aa13.23□□□□□ -0.29
CHD8-208ENST00000555301 SLC15A4Q8N697 577 aa13.23□□□□□ -0.29
CHD8-208ENST00000555301 ZNF441Q8N8Z8 693 aa13.23□□□□□ -0.29
CHD8-208ENST00000555301 OR5AK3PQ8NH89 298 aa13.23□□□□□ -0.29
CHD8-208ENST00000555301 SLC22A8Q8TCC7 542 aa13.23□□□□□ -0.29
CHD8-208ENST00000555301 TTC9Q92623 222 aa13.23□□□□□ -0.29
CHD8-208ENST00000555301 CMTM5Q96DZ9 223 aa13.23□□□□□ -0.29
CHD8-208ENST00000555301 GIMAP5Q96F15 307 aa13.23□□□□□ -0.29
CHD8-208ENST00000555301 LCORQ96JN0 433 aaPredicted RBP13.23□□□□□ -0.29
CHD8-208ENST00000555301 BTBD9Q96Q07 612 aa13.23□□□□□ -0.29
CHD8-208ENST00000555301 PHF12Q96QT6 1004 aa13.23□□□□□ -0.29
CHD8-208ENST00000555301 SLC35A5Q9BS91 424 aa13.23□□□□□ -0.29
CHD8-208ENST00000555301 TRIM4Q9C037 500 aa13.23□□□□□ -0.29
CHD8-208ENST00000555301 FAF1Q9UNN5 650 aaPredicted RBP13.23□□□□□ -0.29
CHD8-208ENST00000555301 DTX4Q9Y2E6 619 aa13.23□□□□□ -0.29
CHD8-208ENST00000555301 GPR55Q9Y2T6 319 aaPredicted RBP13.23□□□□□ -0.29
CHD8-208ENST00000555301 LOC100653049A0A140TA62 436 aa13.22□□□□□ -0.29
CHD8-208ENST00000555301 FRG2CA6NGY1 282 aa13.22□□□□□ -0.29
CHD8-208ENST00000555301 ERVH48-1M5A8F1 160 aa13.22□□□□□ -0.29
CHD8-208ENST00000555301 WWP2O00308 870 aa13.22□□□□□ -0.29
CHD8-208ENST00000555301 ACOX3O15254 700 aa13.22□□□□□ -0.29
CHD8-208ENST00000555301 OR2J2O76002 312 aa13.22□□□□□ -0.29
CHD8-208ENST00000555301 KRT34O76011 436 aa13.22□□□□□ -0.29
CHD8-208ENST00000555301 KRT75O95678 551 aa13.22□□□□□ -0.29
CHD8-208ENST00000555301 GSNP06396 782 aa13.22□□□□□ -0.29
CHD8-208ENST00000555301 SFTPCP11686 197 aa13.22□□□□□ -0.29
CHD8-208ENST00000555301 CD1EP15812 388 aa13.22□□□□□ -0.29
CHD8-208ENST00000555301 CHI3L1P36222 383 aaPredicted RBP13.22□□□□□ -0.29
CHD8-208ENST00000555301 CDKN2CP42773 168 aa13.22□□□□□ -0.29
CHD8-208ENST00000555301 NR0B1P51843 470 aaKnown RBP13.22□□□□□ -0.29
CHD8-208ENST00000555301 GAB1Q13480 694 aa13.22□□□□□ -0.29
CHD8-208ENST00000555301 LASP1Q14847 261 aaKnown RBP13.22□□□□□ -0.29
CHD8-208ENST00000555301 PIGGQ5H8A4 983 aa13.22□□□□□ -0.29
CHD8-208ENST00000555301 PAGE3Q5JUK9 113 aa13.22□□□□□ -0.29
CHD8-208ENST00000555301 LRIF1Q5T3J3 769 aa13.22□□□□□ -0.29
CHD8-208ENST00000555301 IGFL2Q6UWQ7 119 aa13.22□□□□□ -0.29
CHD8-208ENST00000555301 DNAJC14Q6Y2X3 702 aaPredicted RBP13.22□□□□□ -0.29
CHD8-208ENST00000555301 LINC00696Q6ZRV3 163 aa13.22□□□□□ -0.29
CHD8-208ENST00000555301 C6orf120Q7Z4R8 191 aa13.22□□□□□ -0.29
CHD8-208ENST00000555301 SNX32Q86XE0 403 aa13.22□□□□□ -0.29
CHD8-208ENST00000555301 DPP10Q8N608 796 aa13.22□□□□□ -0.29
CHD8-208ENST00000555301 NEURL3Q96EH8 262 aa13.22□□□□□ -0.29
CHD8-208ENST00000555301 HSPBAP1Q96EW2 488 aa13.22□□□□□ -0.29
CHD8-208ENST00000555301 ABHD17AQ96GS6 310 aa13.22□□□□□ -0.29
CHD8-208ENST00000555301 RASL10BQ96S79 203 aa13.22□□□□□ -0.29
CHD8-208ENST00000555301 NPAS2Q99743 824 aa13.22□□□□□ -0.29
CHD8-208ENST00000555301 LMF2Q9BU23 707 aaKnown RBP13.22□□□□□ -0.29
CHD8-208ENST00000555301 ACTRT3Q9BYD9 372 aa13.22□□□□□ -0.29
CHD8-208ENST00000555301 PAIP1Q9H074 479 aaKnown RBP13.22□□□□□ -0.29
CHD8-208ENST00000555301 RNF32Q9H0A6 362 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms