RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 UCP1P25874 307 aa4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 NOP14P78316 857 aaKnown RBP4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 IL9RQ01113 521 aa4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 CCL14Q16627 93 aa4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 PCK2Q16822 640 aa4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 ZNF699Q32M78 642 aa4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 SNAI3Q3KNW1 292 aa4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 TAF3Q5VWG9 929 aa4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 SEL1L3Q68CR1 1132 aa4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 ATRAIDQ6UW56 229 aa4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 APOOLQ6UXV4 268 aa4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 STOX1Q6ZVD7 989 aa4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 GET4Q7L5D6 327 aaPredicted RBP4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 P4HA3Q7Z4N8 544 aa4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 ARL14Q8N4G2 192 aa4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 CERS5Q8N5B7 392 aa4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 BCORP1Q8N888 145 aa4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 CSNK1G2-AS1Q8NCQ2 148 aa4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 PINX1Q96BK5 328 aaKnown RBP4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 TRIM6Q9C030 488 aaPredicted RBP4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 RWDD1Q9H446 243 aaPredicted RBP4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 ECT2Q9H8V3 914 aa4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 PURGQ9UJV8 347 aaKnown RBP4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 ISY1Q9ULR0 285 aaKnown RBP4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 FZR1Q9UM11 496 aa4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 MGAT4BQ9UQ53 548 aa4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 AURKCQ9UQB9 309 aa4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 CFTRP13569 1480 aa4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 TOP2AP11388 1531 aaKnown RBP4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 ABCC8Q09428 1581 aa4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 FAM230AA0A1W2PPH8 454 aa4.34□□□□□ -1.71
CKS1BP1-201ENST00000555221 A0A1W2PPR1 153 aa4.34□□□□□ -1.71
CKS1BP1-201ENST00000555221 RPL37AP8A6NKH3 93 aa4.34□□□□□ -1.71
CKS1BP1-201ENST00000555221 MCF2LO15068 1137 aa4.34□□□□□ -1.71
CKS1BP1-201ENST00000555221 TOM1L1O75674 476 aa4.34□□□□□ -1.71
CKS1BP1-201ENST00000555221 PDE5AO76074 875 aa4.34□□□□□ -1.71
CKS1BP1-201ENST00000555221 SEMA4FO95754 770 aa4.34□□□□□ -1.71
CKS1BP1-201ENST00000555221 GOT2P00505 430 aaKnown RBP4.34□□□□□ -1.71
CKS1BP1-201ENST00000555221 OAS1P00973 400 aaKnown RBP4.34□□□□□ -1.71
CKS1BP1-201ENST00000555221 MT-ND1P03886 318 aa4.34□□□□□ -1.71
CKS1BP1-201ENST00000555221 SNRPCP09234 159 aaKnown RBP4.34□□□□□ -1.71
CKS1BP1-201ENST00000555221 IL4RP24394 825 aa4.34□□□□□ -1.71
CKS1BP1-201ENST00000555221 PTPN4P29074 926 aa4.34□□□□□ -1.71
CKS1BP1-201ENST00000555221 VCPP55072 806 aaKnown RBP4.34□□□□□ -1.71
CKS1BP1-201ENST00000555221 MTTPP55157 894 aa4.34□□□□□ -1.71
CKS1BP1-201ENST00000555221 TRA2BP62995 288 aaKnown RBP4.34□□□□□ -1.71
CKS1BP1-201ENST00000555221 NAAAQ02083 359 aa4.34□□□□□ -1.71
CKS1BP1-201ENST00000555221 SRYQ05066 204 aa4.34□□□□□ -1.71
CKS1BP1-201ENST00000555221 FUT7Q11130 342 aa4.34□□□□□ -1.71
CKS1BP1-201ENST00000555221 SCGB2A2Q13296 93 aa4.34□□□□□ -1.71
CKS1BP1-201ENST00000555221 TMEM44Q2T9K0 475 aa4.34□□□□□ -1.71
CKS1BP1-201ENST00000555221 HSP90AA5PQ58FG0 334 aa4.34□□□□□ -1.71
CKS1BP1-201ENST00000555221 ZNF506Q5JVG8 444 aa4.34□□□□□ -1.71
CKS1BP1-201ENST00000555221 ZNF772Q68DY9 489 aaPredicted RBP4.34□□□□□ -1.71
CKS1BP1-201ENST00000555221 ARSKQ6UWY0 536 aa4.34□□□□□ -1.71
CKS1BP1-201ENST00000555221 SLC47A2Q86VL8 602 aa4.34□□□□□ -1.71
CKS1BP1-201ENST00000555221 CENPSQ8N2Z9 138 aa4.34□□□□□ -1.71
CKS1BP1-201ENST00000555221 ZNF485Q8NCK3 441 aa4.34□□□□□ -1.71
CKS1BP1-201ENST00000555221 OR52B4Q8NGK2 314 aa4.34□□□□□ -1.71
CKS1BP1-201ENST00000555221 FLVCR1-AS1Q8TAF5 88 aa4.34□□□□□ -1.71
CKS1BP1-201ENST00000555221 DLX4Q92988 240 aaPredicted RBP4.34□□□□□ -1.71
CKS1BP1-201ENST00000555221 LHX4Q969G2 390 aa4.34□□□□□ -1.71
CKS1BP1-201ENST00000555221 FAM173AQ9BQD7 235 aa4.34□□□□□ -1.71
CKS1BP1-201ENST00000555221 APOOQ9BUR5 198 aa4.34□□□□□ -1.71
CKS1BP1-201ENST00000555221 EGLN1Q9GZT9 426 aa4.34□□□□□ -1.71
CKS1BP1-201ENST00000555221 ADNPQ9H2P0 1102 aa4.34□□□□□ -1.71
CKS1BP1-201ENST00000555221 RNF41Q9H4P4 317 aaPredicted RBP4.34□□□□□ -1.71
CKS1BP1-201ENST00000555221 ALG9Q9H6U8 611 aa4.34□□□□□ -1.71
CKS1BP1-201ENST00000555221 VAT1LQ9HCJ6 419 aa4.34□□□□□ -1.71
CKS1BP1-201ENST00000555221 ATP8B3O60423 1300 aa4.34□□□□□ -1.71
CKS1BP1-201ENST00000555221 NCAPD2Q15021 1401 aa4.34□□□□□ -1.71
CKS1BP1-201ENST00000555221 SNED1Q8TER0 1413 aa4.34□□□□□ -1.71
CKS1BP1-201ENST00000555221 ABCC4O15439 1325 aa4.33□□□□□ -1.72
CKS1BP1-201ENST00000555221 RGSL1A5PLK6 1076 aa4.33□□□□□ -1.72
CKS1BP1-201ENST00000555221 LRIT2A6NDA9 550 aa4.33□□□□□ -1.72
CKS1BP1-201ENST00000555221 ACOD1A6NK06 481 aa4.33□□□□□ -1.72
CKS1BP1-201ENST00000555221 NPIPA2E9PIF3 369 aa4.33□□□□□ -1.72
CKS1BP1-201ENST00000555221 F8WDY8 70 aa4.33□□□□□ -1.72
CKS1BP1-201ENST00000555221 H3BTX0 84 aa4.33□□□□□ -1.72
CKS1BP1-201ENST00000555221 PDXKO00764 312 aa4.33□□□□□ -1.72
CKS1BP1-201ENST00000555221 PI15O43692 258 aa4.33□□□□□ -1.72
CKS1BP1-201ENST00000555221 HOXD4P09016 255 aaPredicted RBP4.33□□□□□ -1.72
CKS1BP1-201ENST00000555221 CYP11B1P15538 503 aa4.33□□□□□ -1.72
CKS1BP1-201ENST00000555221 SAA4P35542 130 aa4.33□□□□□ -1.72
CKS1BP1-201ENST00000555221 CD226Q15762 336 aa4.33□□□□□ -1.72
CKS1BP1-201ENST00000555221 ZKSCAN8Q15776 578 aaPredicted RBP4.33□□□□□ -1.72
CKS1BP1-201ENST00000555221 LINC00242Q5T6M2 205 aa4.33□□□□□ -1.72
CKS1BP1-201ENST00000555221 RFWD3Q6PCD5 774 aa4.33□□□□□ -1.72
CKS1BP1-201ENST00000555221 MISPQ8IVT2 679 aa4.33□□□□□ -1.72
CKS1BP1-201ENST00000555221 ARFGAP2Q8N6H7 521 aa4.33□□□□□ -1.72
CKS1BP1-201ENST00000555221 ZNF491Q8N8L2 437 aa4.33□□□□□ -1.72
CKS1BP1-201ENST00000555221 OR4Q3Q8NH05 313 aa4.33□□□□□ -1.72
CKS1BP1-201ENST00000555221 GIPC3Q8TF64 312 aa4.33□□□□□ -1.72
CKS1BP1-201ENST00000555221 NTNG2Q96CW9 530 aa4.33□□□□□ -1.72
CKS1BP1-201ENST00000555221 C16orf45Q96MC5 204 aaPredicted RBP4.33□□□□□ -1.72
CKS1BP1-201ENST00000555221 SOSTQ9BQB4 213 aa4.33□□□□□ -1.72
CKS1BP1-201ENST00000555221 TTYH2Q9BSA4 534 aa4.33□□□□□ -1.72
CKS1BP1-201ENST00000555221 FICDQ9BVA6 458 aa4.33□□□□□ -1.72
CKS1BP1-201ENST00000555221 UBXN6Q9BZV1 441 aa4.33□□□□□ -1.72
CKS1BP1-201ENST00000555221 PNNQ9H307 717 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms