RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 RHCEP18577 417 aa8.33□□□□□ -1.08
TDP1-210ENST00000554976 NELFEP18615 380 aaKnown RBP8.33□□□□□ -1.08
TDP1-210ENST00000554976 RYKP34925 604 aa8.33□□□□□ -1.08
TDP1-210ENST00000554976 EFNA3P52797 238 aa8.33□□□□□ -1.08
TDP1-210ENST00000554976 OR1D5P58170 312 aa8.33□□□□□ -1.08
TDP1-210ENST00000554976 ARHGAP11BQ3KRB8 267 aa8.33□□□□□ -1.08
TDP1-210ENST00000554976 SPDYE7PQ495Y7 208 aa8.33□□□□□ -1.08
TDP1-210ENST00000554976 TRMT12Q53H54 448 aaKnown RBP8.33□□□□□ -1.08
TDP1-210ENST00000554976 GARNL3Q5VVW2 1013 aa8.33□□□□□ -1.08
TDP1-210ENST00000554976 LYSMD4Q5XG99 296 aa8.33□□□□□ -1.08
TDP1-210ENST00000554976 TCTN3Q6NUS6 607 aa8.33□□□□□ -1.08
TDP1-210ENST00000554976 ARMC6Q6NXE6 501 aa8.33□□□□□ -1.08
TDP1-210ENST00000554976 WDR74Q6RFH5 385 aaPredicted RBP8.33□□□□□ -1.08
TDP1-210ENST00000554976 ISLR2Q6UXK2 745 aa8.33□□□□□ -1.08
TDP1-210ENST00000554976 TMPRSS9Q7Z410 1059 aa8.33□□□□□ -1.08
TDP1-210ENST00000554976 OR4N5Q8IXE1 308 aa8.33□□□□□ -1.08
TDP1-210ENST00000554976 SAP25Q8TEE9 199 aa8.33□□□□□ -1.08
TDP1-210ENST00000554976 SLC41A2Q96JW4 573 aa8.33□□□□□ -1.08
TDP1-210ENST00000554976 TRNT1Q96Q11 434 aaKnown RBP8.33□□□□□ -1.08
TDP1-210ENST00000554976 SAP130Q9H0E3 1048 aa8.33□□□□□ -1.08
TDP1-210ENST00000554976 PRM3Q9NNZ6 103 aa8.33□□□□□ -1.08
TDP1-210ENST00000554976 EXD2Q9NVH0 621 aa8.33□□□□□ -1.08
TDP1-210ENST00000554976 NLGN3Q9NZ94 848 aa8.33□□□□□ -1.08
TDP1-210ENST00000554976 A4GNTQ9UNA3 340 aa8.33□□□□□ -1.08
TDP1-210ENST00000554976 PLCL2Q9UPR0 1127 aa8.33□□□□□ -1.08
TDP1-210ENST00000554976 PCDHGB3Q9Y5G1 929 aa8.33□□□□□ -1.08
TDP1-210ENST00000554976 A0A1B0GTQ1 180 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 BLACEA4D250 179 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 CHST10O43529 356 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 LGI1O95970 557 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 EIF2S1P05198 315 aaKnown RBP8.32□□□□□ -1.08
TDP1-210ENST00000554976 GUSBP08236 651 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 PABPC4LP0CB38 370 aaKnown RBP8.32□□□□□ -1.08
TDP1-210ENST00000554976 CBLP22681 906 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 PRR5P85299 388 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 PLAURQ03405 335 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 KCNC4Q03721 635 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 IL18R1Q13478 541 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 LASP1Q14847 261 aaKnown RBP8.32□□□□□ -1.08
TDP1-210ENST00000554976 MICAQ29983 383 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 ZIK1Q3SY52 487 aaPredicted RBP8.32□□□□□ -1.08
TDP1-210ENST00000554976 THOC7Q6I9Y2 204 aaKnown RBP8.32□□□□□ -1.08
TDP1-210ENST00000554976 BHLHB9Q6PI77 547 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 FRRS1Q6ZNA5 592 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 D2HGDHQ8N465 521 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 ZSCAN1Q8NBB4 408 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 PIK3C3Q8NEB9 887 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 CYGBQ8WWM9 190 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 ZNF566Q969W8 418 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 OTUB1Q96FW1 271 aaPredicted RBP8.32□□□□□ -1.08
TDP1-210ENST00000554976 CLK4Q9HAZ1 481 aaKnown RBP8.32□□□□□ -1.08
TDP1-210ENST00000554976 INIPQ9NRY2 104 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 MAN2C1Q9NTJ4 1040 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 RLIMQ9NVW2 624 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 PCDHGA8Q9Y5G5 932 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 EXPH5Q8NEV8 1989 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 LOC100130705A0A1B0GUX0 176 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 ADAMDEC1O15204 470 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 NME6O75414 186 aaPredicted RBP8.32□□□□□ -1.08
TDP1-210ENST00000554976 PDE9AO76083 593 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 BMP10O95393 424 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 CBX7O95931 251 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 GPC1P35052 558 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 POLR2IP36954 125 aaKnown RBP8.32□□□□□ -1.08
TDP1-210ENST00000554976 TUBA4AP68366 448 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 EXOC3L2Q2M3D2 409 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 RFX4Q33E94 735 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 TYW3Q6IPR3 259 aaKnown RBP8.32□□□□□ -1.08
TDP1-210ENST00000554976 RBM45Q8IUH3 476 aaKnown RBP8.32□□□□□ -1.08
TDP1-210ENST00000554976 ST13P4Q8IZP2 240 aaPredicted RBP8.32□□□□□ -1.08
TDP1-210ENST00000554976 TGM7Q96PF1 710 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 YTHDF1Q9BYJ9 559 aaKnown RBP8.32□□□□□ -1.08
TDP1-210ENST00000554976 SPRTNQ9H040 489 aaPredicted RBP8.32□□□□□ -1.08
TDP1-210ENST00000554976 REEP1Q9H902 201 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 C3orf14Q9HBI5 128 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 GIMAP4Q9NUV9 329 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 TBCCD1Q9NVR7 557 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 PDP1Q9P0J1 537 aaPredicted RBP8.32□□□□□ -1.08
TDP1-210ENST00000554976 PSME2Q9UL46 239 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 RAB23Q9ULC3 237 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 MYRFQ9Y2G1 1151 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 SAMHD1Q9Y3Z3 626 aaKnown RBP8.32□□□□□ -1.08
TDP1-210ENST00000554976 SPAG17Q6Q759 2223 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 HTR3EA5X5Y0 456 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 H0YIG0 161 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 GNGT2O14610 69 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 ZBTB11O95625 1053 aaPredicted RBP8.32□□□□□ -1.08
TDP1-210ENST00000554976 ALBP02768 609 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 TP53P04637 393 aaPredicted RBP8.32□□□□□ -1.08
TDP1-210ENST00000554976 SLC35E2P0CK97 266 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 IGFBP5P24593 272 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 PDX1P52945 283 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 HPCAP84074 193 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 MAP4K2Q12851 820 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 TMEM53Q6P2H8 277 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 DHRS4L2Q6PKH6 230 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 SLC16A11Q8NCK7 471 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 YIPF4Q9BSR8 244 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 LMF2Q9BU23 707 aaKnown RBP8.32□□□□□ -1.08
TDP1-210ENST00000554976 PINK1Q9BXM7 581 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms