RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 FRKP42685 505 aaPredicted RBP11.38□□□□□ -0.59
SYNE2-214ENST00000554928 DNASE1L1P49184 302 aa11.38□□□□□ -0.59
SYNE2-214ENST00000554928 KCNK10P57789 538 aa11.38□□□□□ -0.59
SYNE2-214ENST00000554928 EIF2S3LQ2VIR3 472 aaKnown RBP11.38□□□□□ -0.59
SYNE2-214ENST00000554928 CT45A2Q5DJT8 189 aa11.38□□□□□ -0.59
SYNE2-214ENST00000554928 PRAMEF20Q5VT98 475 aa11.38□□□□□ -0.59
SYNE2-214ENST00000554928 ATG16L1Q676U5 607 aa11.38□□□□□ -0.59
SYNE2-214ENST00000554928 OPN5Q6U736 354 aa11.38□□□□□ -0.59
SYNE2-214ENST00000554928 SIAH3Q8IW03 269 aa11.38□□□□□ -0.59
SYNE2-214ENST00000554928 TMEM178AQ8NBL3 297 aa11.38□□□□□ -0.59
SYNE2-214ENST00000554928 GALNT11Q8NCW6 608 aa11.38□□□□□ -0.59
SYNE2-214ENST00000554928 OR4N2Q8NGD1 307 aa11.38□□□□□ -0.59
SYNE2-214ENST00000554928 RAB3IL1Q8TBN0 382 aa11.38□□□□□ -0.59
SYNE2-214ENST00000554928 SLC22A8Q8TCC7 542 aa11.38□□□□□ -0.59
SYNE2-214ENST00000554928 NR4A3Q92570 626 aa11.38□□□□□ -0.59
SYNE2-214ENST00000554928 SPACA9Q96E40 222 aaPredicted RBP11.38□□□□□ -0.59
SYNE2-214ENST00000554928 ELP4Q96EB1 424 aa11.38□□□□□ -0.59
SYNE2-214ENST00000554928 ZNF764Q96H86 408 aaPredicted RBP11.38□□□□□ -0.59
SYNE2-214ENST00000554928 VSTM2LQ96N03 204 aa11.38□□□□□ -0.59
SYNE2-214ENST00000554928 FOLH1BQ9HBA9 442 aa11.38□□□□□ -0.59
SYNE2-214ENST00000554928 ASIC5Q9NY37 505 aa11.38□□□□□ -0.59
SYNE2-214ENST00000554928 CNOT11Q9UKZ1 510 aaKnown RBP11.38□□□□□ -0.59
SYNE2-214ENST00000554928 VPS4AQ9UN37 437 aa11.38□□□□□ -0.59
SYNE2-214ENST00000554928 HRH3Q9Y5N1 445 aa11.38□□□□□ -0.59
SYNE2-214ENST00000554928 NPIPA5E9PKD4 350 aa11.37□□□□□ -0.59
SYNE2-214ENST00000554928 ANKRD28O15084 1053 aa11.37□□□□□ -0.59
SYNE2-214ENST00000554928 HDAC3O15379 428 aa11.37□□□□□ -0.59
SYNE2-214ENST00000554928 PSMG1O95456 288 aa11.37□□□□□ -0.59
SYNE2-214ENST00000554928 PRPS2P11908 318 aa11.37□□□□□ -0.59
SYNE2-214ENST00000554928 LBPP18428 481 aa11.37□□□□□ -0.59
SYNE2-214ENST00000554928 ABCD3P28288 659 aa11.37□□□□□ -0.59
SYNE2-214ENST00000554928 MAPK1P28482 360 aa11.37□□□□□ -0.59
SYNE2-214ENST00000554928 ASMTP46597 345 aa11.37□□□□□ -0.59
SYNE2-214ENST00000554928 NME5P56597 212 aa11.37□□□□□ -0.59
SYNE2-214ENST00000554928 HSF1Q00613 529 aa11.37□□□□□ -0.59
SYNE2-214ENST00000554928 INAQ16352 499 aa11.37□□□□□ -0.59
SYNE2-214ENST00000554928 HLA-DQA1Q5Y7H0 255 aa11.37□□□□□ -0.59
SYNE2-214ENST00000554928 TMEM198Q66K66 360 aa11.37□□□□□ -0.59
SYNE2-214ENST00000554928 RTL4Q6ZR62 310 aa11.37□□□□□ -0.59
SYNE2-214ENST00000554928 TRIM42Q8IWZ5 723 aa11.37□□□□□ -0.59
SYNE2-214ENST00000554928 GPALPP1Q8IXQ4 340 aa11.37□□□□□ -0.59
SYNE2-214ENST00000554928 SAMD14Q8IZD0 417 aaPredicted RBP11.37□□□□□ -0.59
SYNE2-214ENST00000554928 OR2L13Q8N349 312 aa11.37□□□□□ -0.59
SYNE2-214ENST00000554928 HORMAD2Q8N7B1 307 aa11.37□□□□□ -0.59
SYNE2-214ENST00000554928 GOLGA6L1Q8N7Z2 621 aa11.37□□□□□ -0.59
SYNE2-214ENST00000554928 FAM13CQ8NE31 585 aa11.37□□□□□ -0.59
SYNE2-214ENST00000554928 OR2M7Q8NG81 312 aa11.37□□□□□ -0.59
SYNE2-214ENST00000554928 PAQR8Q8TEZ7 354 aa11.37□□□□□ -0.59
SYNE2-214ENST00000554928 TP53INP1Q96A56 240 aa11.37□□□□□ -0.59
SYNE2-214ENST00000554928 TMEM125Q96AQ2 219 aa11.37□□□□□ -0.59
SYNE2-214ENST00000554928 LCORQ96JN0 433 aaPredicted RBP11.37□□□□□ -0.59
SYNE2-214ENST00000554928 MARK4Q96L34 752 aa11.37□□□□□ -0.59
SYNE2-214ENST00000554928 TEX37Q96LM6 180 aa11.37□□□□□ -0.59
SYNE2-214ENST00000554928 OR52B2Q96RD2 323 aa11.37□□□□□ -0.59
SYNE2-214ENST00000554928 TIMMDC1Q9NPL8 285 aa11.37□□□□□ -0.59
SYNE2-214ENST00000554928 SIRT3Q9NTG7 399 aaPredicted RBP11.37□□□□□ -0.59
SYNE2-214ENST00000554928 TUBA8Q9NY65 449 aaPredicted RBP11.37□□□□□ -0.59
SYNE2-214ENST00000554928 NPIPA1Q9UND3 350 aa11.37□□□□□ -0.59
SYNE2-214ENST00000554928 C19orf53Q9UNZ5 99 aaPredicted RBP11.37□□□□□ -0.59
SYNE2-214ENST00000554928 EIF3LQ9Y262 564 aaKnown RBP11.37□□□□□ -0.59
SYNE2-214ENST00000554928 GPR55Q9Y2T6 319 aaPredicted RBP11.37□□□□□ -0.59
SYNE2-214ENST00000554928 KLF13Q9Y2Y9 288 aaPredicted RBP11.37□□□□□ -0.59
SYNE2-214ENST00000554928 NPFFR2Q9Y5X5 522 aa11.37□□□□□ -0.59
SYNE2-214ENST00000554928 CHCHD2Q9Y6H1 151 aaPredicted RBP11.37□□□□□ -0.59
SYNE2-214ENST00000554928 UBR5O95071 2799 aaPredicted RBP11.37□□□□□ -0.59
SYNE2-214ENST00000554928 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.36□□□□□ -0.59
SYNE2-214ENST00000554928 ANKUB1A6NFN9 424 aa11.36□□□□□ -0.59
SYNE2-214ENST00000554928 PLOD2O00469 737 aa11.36□□□□□ -0.59
SYNE2-214ENST00000554928 CDK2AP1O14519 115 aa11.36□□□□□ -0.59
SYNE2-214ENST00000554928 SNUPNO95149 360 aaKnown RBP11.36□□□□□ -0.59
SYNE2-214ENST00000554928 RNF224P0DH78 156 aa11.36□□□□□ -0.59
SYNE2-214ENST00000554928 IL12AP29459 219 aa11.36□□□□□ -0.59
SYNE2-214ENST00000554928 HPCAL1P37235 193 aa11.36□□□□□ -0.59
SYNE2-214ENST00000554928 PPICP45877 212 aa11.36□□□□□ -0.59
SYNE2-214ENST00000554928 WNT3P56703 355 aa11.36□□□□□ -0.59
SYNE2-214ENST00000554928 CLDN8P56748 225 aa11.36□□□□□ -0.59
SYNE2-214ENST00000554928 PHC1P78364 1004 aa11.36□□□□□ -0.59
SYNE2-214ENST00000554928 PSG6Q00889 435 aa11.36□□□□□ -0.59
SYNE2-214ENST00000554928 KCNC4Q03721 635 aa11.36□□□□□ -0.59
SYNE2-214ENST00000554928 FOXO1Q12778 655 aa11.36□□□□□ -0.59
SYNE2-214ENST00000554928 ZNF155Q12901 538 aaPredicted RBP11.36□□□□□ -0.59
SYNE2-214ENST00000554928 NTRK2Q16620 822 aa11.36□□□□□ -0.59
SYNE2-214ENST00000554928 OR4F3Q6IEY1 312 aa11.36□□□□□ -0.59
SYNE2-214ENST00000554928 FAM47EQ6ZV65 393 aa11.36□□□□□ -0.59
SYNE2-214ENST00000554928 FGD2Q7Z6J4 655 aa11.36□□□□□ -0.59
SYNE2-214ENST00000554928 ATCAYQ86WG3 371 aa11.36□□□□□ -0.59
SYNE2-214ENST00000554928 CHERPQ8IWX8 916 aaKnown RBP11.36□□□□□ -0.59
SYNE2-214ENST00000554928 CLECL1Q8IZS7 167 aa11.36□□□□□ -0.59
SYNE2-214ENST00000554928 TAGAPQ8N103 731 aa11.36□□□□□ -0.59
SYNE2-214ENST00000554928 SLC15A4Q8N697 577 aa11.36□□□□□ -0.59
SYNE2-214ENST00000554928 ST6GALNAC3Q8NDV1 305 aa11.36□□□□□ -0.59
SYNE2-214ENST00000554928 FBXO30Q8TB52 745 aa11.36□□□□□ -0.59
SYNE2-214ENST00000554928 LRRC8CQ8TDW0 803 aa11.36□□□□□ -0.59
SYNE2-214ENST00000554928 CKAP2Q8WWK9 683 aa11.36□□□□□ -0.59
SYNE2-214ENST00000554928 HGDQ93099 445 aa11.36□□□□□ -0.59
SYNE2-214ENST00000554928 COQ8BQ96D53 544 aa11.36□□□□□ -0.59
SYNE2-214ENST00000554928 MTERF3Q96E29 417 aa11.36□□□□□ -0.59
SYNE2-214ENST00000554928 OMA1Q96E52 524 aa11.36□□□□□ -0.59
SYNE2-214ENST00000554928 GIMAP5Q96F15 307 aa11.36□□□□□ -0.59
SYNE2-214ENST00000554928 OTUB1Q96FW1 271 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms