RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 AP3D1O14617 1153 aa11.01□□□□□ -0.65
SHMT2-212ENST00000554467 CCNKO75909 580 aa11.01□□□□□ -0.65
SHMT2-212ENST00000554467 ANGPTL1O95841 491 aa11.01□□□□□ -0.65
SHMT2-212ENST00000554467 DLGAP3O95886 979 aa11.01□□□□□ -0.65
SHMT2-212ENST00000554467 HOXC4P09017 264 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-212ENST00000554467 IL9P15248 144 aa11.01□□□□□ -0.65
SHMT2-212ENST00000554467 CD6P30203 668 aa11.01□□□□□ -0.65
SHMT2-212ENST00000554467 IFNA8P32881 189 aa11.01□□□□□ -0.65
SHMT2-212ENST00000554467 SPIBQ01892 262 aa11.01□□□□□ -0.65
SHMT2-212ENST00000554467 RSBN1Q5VWQ0 802 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-212ENST00000554467 RBM45Q8IUH3 476 aaKnown RBP11.01□□□□□ -0.65
SHMT2-212ENST00000554467 POC5Q8NA72 575 aa11.01□□□□□ -0.65
SHMT2-212ENST00000554467 MFSD9Q8NBP5 474 aa11.01□□□□□ -0.65
SHMT2-212ENST00000554467 TTLQ8NG68 377 aa11.01□□□□□ -0.65
SHMT2-212ENST00000554467 CHAC2Q8WUX2 184 aa11.01□□□□□ -0.65
SHMT2-212ENST00000554467 NEURL3Q96EH8 262 aa11.01□□□□□ -0.65
SHMT2-212ENST00000554467 DSN1Q9H410 356 aa11.01□□□□□ -0.65
SHMT2-212ENST00000554467 HRASLS2Q9NWW9 162 aa11.01□□□□□ -0.65
SHMT2-212ENST00000554467 WSB2Q9NYS7 404 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-212ENST00000554467 A0A0X1KG70 313 aa11.01□□□□□ -0.65
SHMT2-212ENST00000554467 STK25O00506 426 aa11.01□□□□□ -0.65
SHMT2-212ENST00000554467 TBX1O43435 398 aa11.01□□□□□ -0.65
SHMT2-212ENST00000554467 ARAFP10398 606 aa11.01□□□□□ -0.65
SHMT2-212ENST00000554467 DNAJA1P31689 397 aaKnown RBP11.01□□□□□ -0.65
SHMT2-212ENST00000554467 ARHGDIAP52565 204 aa11.01□□□□□ -0.65
SHMT2-212ENST00000554467 ITGA1P56199 1179 aa11.01□□□□□ -0.65
SHMT2-212ENST00000554467 EMX1Q04741 257 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-212ENST00000554467 FADDQ13158 208 aa11.01□□□□□ -0.65
SHMT2-212ENST00000554467 LASP1Q14847 261 aaKnown RBP11.01□□□□□ -0.65
SHMT2-212ENST00000554467 FAM214AQ32MH5 1076 aa11.01□□□□□ -0.65
SHMT2-212ENST00000554467 SAXO2Q658L1 398 aa11.01□□□□□ -0.65
SHMT2-212ENST00000554467 FCRL6Q6DN72 434 aa11.01□□□□□ -0.65
SHMT2-212ENST00000554467 ABI3BPQ7Z7G0 1075 aa11.01□□□□□ -0.65
SHMT2-212ENST00000554467 FAR1Q8WVX9 515 aa11.01□□□□□ -0.65
SHMT2-212ENST00000554467 QRSL1Q9H0R6 528 aaKnown RBP11.01□□□□□ -0.65
SHMT2-212ENST00000554467 RABL2AQ9UBK7 228 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-212ENST00000554467 CAB39Q9Y376 341 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-212ENST00000554467 M0R3G1 203 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 SLC28A2O43868 658 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 NDUFS2O75306 463 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 HPRP00739 348 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 GTF2E2P29084 291 aaKnown RBP11□□□□□ -0.65
SHMT2-212ENST00000554467 RABIFP47224 123 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 SIM1P81133 766 aaPredicted RBP11□□□□□ -0.65
SHMT2-212ENST00000554467 SRSF5Q13243 272 aaKnown RBP11□□□□□ -0.65
SHMT2-212ENST00000554467 CDK10Q15131 360 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 TMEM35AQ53FP2 167 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 FIGLAQ6QHK4 219 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 LINC00299Q6ZSB3 139 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 PJA1Q8NG27 643 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 OR9A2Q8NGT5 310 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 RSC1A1Q92681 617 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 OR51I1Q9H343 314 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 ERVK-18Q9QC07 812 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 KCNE3Q9Y6H6 103 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 SPTY2D1-AS1A0A0U1RR47 76 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 TNFRSF10CO14798 259 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 MFN2O95140 757 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 ITIH1P19827 911 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 FPR1P21462 350 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 AHRP35869 848 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 GNG2P59768 71 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 YPEL5P62699 121 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 IFI44LQ53G44 452 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 RBM48Q5RL73 367 aaKnown RBP11□□□□□ -0.65
SHMT2-212ENST00000554467 GPR153Q6NV75 609 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 GDPD3Q7L5L3 318 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 ASPGQ86U10 573 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 TBC1D19Q8N5T2 526 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 ESX1Q8N693 406 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 ZNF540Q8NDQ6 660 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 OR9Q2Q8NGE9 314 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 SUN3Q8TAQ9 357 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 PHF10Q8WUB8 498 aaKnown RBP11□□□□□ -0.65
SHMT2-212ENST00000554467 RPL3LQ92901 407 aaKnown RBP11□□□□□ -0.65
SHMT2-212ENST00000554467 SPATA9Q9BWV2 254 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 PITHD1Q9GZP4 211 aaPredicted RBP11□□□□□ -0.65
SHMT2-212ENST00000554467 IRF2BPLQ9H1B7 796 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 TMEM38AQ9H6F2 299 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 CTPS2Q9NRF8 586 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 KRT84Q9NSB2 600 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 USE1Q9NZ43 259 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 PCOLCE2Q9UKZ9 415 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 ANGPT4Q9Y264 503 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 WDFY3Q8IZQ1 3526 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 A8MV72 311 aaPredicted RBP11□□□□□ -0.65
SHMT2-212ENST00000554467 TNFRSF11BO00300 401 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 SLC1A7O00341 560 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 NDUFS1P28331 727 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 MC3RP41968 323 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 MAZP56270 477 aaKnown RBP11□□□□□ -0.65
SHMT2-212ENST00000554467 GPLD1P80108 840 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 ZNF630Q2M218 657 aaPredicted RBP11□□□□□ -0.65
SHMT2-212ENST00000554467 EXOC3L2Q2M3D2 409 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 REEP3Q6NUK4 255 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 COMTD1Q86VU5 262 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 GATAD2AQ86YP4 633 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 OR5T3Q8NGG3 340 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 COL21A1Q96P44 957 aa11□□□□□ -0.65
SHMT2-212ENST00000554467 ZNF300Q96RE9 604 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms