RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 DDHD1Q8NEL9 900 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 OR9K2Q8NGE7 335 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 OR56A3Q8NH54 315 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 OR4C6Q8NH72 309 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 OR10J5Q8NHC4 309 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 CYB5D2Q8WUJ1 264 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 RFT1Q96AA3 541 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 AP2M1Q96CW1 435 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 STAMBPL1Q96FJ0 436 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 MED8Q96G25 268 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 PRR11Q96HE9 360 aaPredicted RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 PPP1R2P1Q96PQ5 205 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 CSPG4P5Q96PW8 444 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 ROPN1BQ9BZX4 212 aaPredicted RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 GRIP2Q9C0E4 1043 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 C6orf106Q9H6K1 298 aaPredicted RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 CATSPERBQ9H7T0 1116 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 CNOT10Q9H9A5 744 aaKnown RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 AKIRIN1Q9H9L7 192 aaPredicted RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 APOBEC3GQ9HC16 384 aaKnown RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 RAB18Q9NP72 206 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 ABCC13Q9NSE7 274 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 PLCXD1Q9NUJ7 323 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 POT1Q9NUX5 634 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 PARPBPQ9NWS1 579 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 MRPL22Q9NWU5 206 aaKnown RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 NLGN3Q9NZ94 848 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 MARCH4Q9P2E8 410 aaPredicted RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 RNF14Q9UBS8 474 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 CTNNAL1Q9UBT7 734 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 BCAP29Q9UHQ4 241 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 NAGKQ9UJ70 344 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 CDYLQ9Y232 598 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 HS3ST3A1Q9Y663 406 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 U3KQA8 63 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 ZFHX4Q86UP3 3567 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 VPS13AQ96RL7 3174 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 IGSF10Q6WRI0 2623 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 CNOT1A5YKK6 2376 aaKnown RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 FAM90A20PA6NIJ5 464 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 CLCA1A8K7I4 914 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 K7ENP7 123 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 ITGB1BP1O14713 200 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 TRIM24O15164 1050 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 UBOX5O94941 541 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 RPP14O95059 124 aaKnown RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 PRSS23O95084 383 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 ALDOAP04075 364 aaKnown RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 SHBGP04278 402 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 CTXN2P0C2S0 81 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 GIMD1P0DJR0 217 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 ETS2P15036 469 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 TCP1P17987 556 aaKnown RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 XRCC1P18887 633 aaPredicted RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 TNNI1P19237 187 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 ACVR2AP27037 513 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 CD38P28907 300 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 IL12BP29460 328 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 SHMT2P34897 504 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 BSGP35613 385 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 ARRB1P49407 418 aaPredicted RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 SNU13P55769 128 aaKnown RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 RGS8P57771 180 aaPredicted RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 RAB4BP61018 213 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 UFM1P61960 85 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 PPP2CBP62714 309 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 PPP2CAP67775 309 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 MXRA7P84157 204 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 ATP11AP98196 1134 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 SRSF1Q07955 248 aaKnown RBP eCLIP2.55□□□□□ -2
PRPF39-206ENST00000554429 ACSM1Q08AH1 577 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 PDZK1IP1Q13113 114 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 CTBP1Q13363 440 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 SLC29A2Q14542 456 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 HEPACAMQ14CZ8 416 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 NR0B2Q15466 257 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 KHDC1Q4VXA5 237 aaKnown RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 COQ5Q5HYK3 327 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 CDKAL1Q5VV42 579 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 IRAK1BP1Q5VVH5 260 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 MBLAC2Q68D91 279 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 SLC9A4Q6AI14 798 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 RGS7BPQ6MZT1 257 aaPredicted RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 LRFN4Q6PJG9 635 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 LCLAT1Q6UWP7 414 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 TMEM182Q6ZP80 229 aaPredicted RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 PRICKLE2Q7Z3G6 844 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 LUZP2Q86TE4 346 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 ACOT1Q86TX2 421 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 ARHGEF19Q8IW93 802 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 DCUN1D3Q8IWE4 304 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 SPACA3Q8IXA5 215 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 RBFAQ8N0V3 343 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 NAGSQ8N159 534 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 LRRC17Q8N6Y2 441 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 NAT16Q8N8M0 369 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 HJURPQ8NCD3 748 aaPredicted RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 KIAA0895Q8NCT3 520 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 BHLHE22Q8NFJ8 381 aaPredicted RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 STXBP6Q8NFX7 210 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms