RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 CNIH4Q9P003 139 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 C15orf41Q9Y2V0 281 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 SLC6A5Q9Y345 797 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 MAD1L1Q9Y6D9 718 aa6.63□□□□□ -1.35
ATXN3-219ENST00000553488 KRTAP4-8A0A0G2JLE6 195 aa6.62□□□□□ -1.35
ATXN3-219ENST00000553488 CRLF1O75462 422 aa6.62□□□□□ -1.35
ATXN3-219ENST00000553488 BANF1O75531 89 aa6.62□□□□□ -1.35
ATXN3-219ENST00000553488 WDR47O94967 919 aa6.62□□□□□ -1.35
ATXN3-219ENST00000553488 KRT14P02533 472 aa6.62□□□□□ -1.35
ATXN3-219ENST00000553488 TMIGD3P0DMS9 266 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-219ENST00000553488 BMP7P18075 431 aa6.62□□□□□ -1.35
ATXN3-219ENST00000553488 PGAM1P18669 254 aa6.62□□□□□ -1.35
ATXN3-219ENST00000553488 GNAZP19086 355 aa6.62□□□□□ -1.35
ATXN3-219ENST00000553488 CD22P20273 847 aa6.62□□□□□ -1.35
ATXN3-219ENST00000553488 LOXP28300 417 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-219ENST00000553488 CCKARP32238 428 aa6.62□□□□□ -1.35
ATXN3-219ENST00000553488 GDF5P43026 501 aa6.62□□□□□ -1.35
ATXN3-219ENST00000553488 KCNC1P48547 511 aa6.62□□□□□ -1.35
ATXN3-219ENST00000553488 ZNF75DP51815 510 aa6.62□□□□□ -1.35
ATXN3-219ENST00000553488 RCN2Q14257 317 aa6.62□□□□□ -1.35
ATXN3-219ENST00000553488 RPS6KA2Q15349 733 aa6.62□□□□□ -1.35
ATXN3-219ENST00000553488 KRTAP19-4Q3LI73 84 aa6.62□□□□□ -1.35
ATXN3-219ENST00000553488 FAM45BPQ6NSW5 357 aa6.62□□□□□ -1.35
ATXN3-219ENST00000553488 PHC2Q8IXK0 858 aa6.62□□□□□ -1.35
ATXN3-219ENST00000553488 TXLNBQ8N3L3 684 aa6.62□□□□□ -1.35
ATXN3-219ENST00000553488 BBOF1Q8ND07 529 aa6.62□□□□□ -1.35
ATXN3-219ENST00000553488 FAM45AQ8TCE6 357 aa6.62□□□□□ -1.35
ATXN3-219ENST00000553488 PIGTQ969N2 578 aa6.62□□□□□ -1.35
ATXN3-219ENST00000553488 RHBDF1Q96CC6 855 aa6.62□□□□□ -1.35
ATXN3-219ENST00000553488 WDR34Q96EX3 536 aa6.62□□□□□ -1.35
ATXN3-219ENST00000553488 PERPQ96FX8 193 aa6.62□□□□□ -1.35
ATXN3-219ENST00000553488 RCC1LQ96I51 464 aaKnown RBP6.62□□□□□ -1.35
ATXN3-219ENST00000553488 MARK4Q96L34 752 aa6.62□□□□□ -1.35
ATXN3-219ENST00000553488 JSRP1Q96MG2 331 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-219ENST00000553488 KCNC2Q96PR1 638 aa6.62□□□□□ -1.35
ATXN3-219ENST00000553488 F2RL3Q96RI0 385 aa6.62□□□□□ -1.35
ATXN3-219ENST00000553488 GAL3ST4Q96RP7 486 aa6.62□□□□□ -1.35
ATXN3-219ENST00000553488 TRIB1Q96RU8 372 aa6.62□□□□□ -1.35
ATXN3-219ENST00000553488 TMEM79Q9BSE2 394 aa6.62□□□□□ -1.35
ATXN3-219ENST00000553488 SFXN3Q9BWM7 321 aa6.62□□□□□ -1.35
ATXN3-219ENST00000553488 MS4A8Q9BY19 250 aa6.62□□□□□ -1.35
ATXN3-219ENST00000553488 PITHD1Q9GZP4 211 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-219ENST00000553488 WWTR1Q9GZV5 400 aa6.62□□□□□ -1.35
ATXN3-219ENST00000553488 EHD1Q9H4M9 534 aa6.62□□□□□ -1.35
ATXN3-219ENST00000553488 PIF1Q9H611 641 aa6.62□□□□□ -1.35
ATXN3-219ENST00000553488 COPS7BQ9H9Q2 264 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-219ENST00000553488 CALHM2Q9HA72 323 aa6.62□□□□□ -1.35
ATXN3-219ENST00000553488 C6orf203Q9P0P8 240 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-219ENST00000553488 ZNF490Q9ULM2 529 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-219ENST00000553488 CAMK2AQ9UQM7 478 aa6.62□□□□□ -1.35
ATXN3-219ENST00000553488 SF3B6Q9Y3B4 125 aaKnown RBP6.62□□□□□ -1.35
ATXN3-219ENST00000553488 OARD1Q9Y530 152 aa6.62□□□□□ -1.35
ATXN3-219ENST00000553488 CADP27708 2225 aa6.62□□□□□ -1.35
ATXN3-219ENST00000553488 PCNX3Q9H6A9 2034 aa6.62□□□□□ -1.35
ATXN3-219ENST00000553488 YLPM1P49750 1951 aaKnown RBP6.62□□□□□ -1.35
ATXN3-219ENST00000553488 RTCAO00442 366 aaKnown RBP6.61□□□□□ -1.35
ATXN3-219ENST00000553488 CTIFO43310 598 aaKnown RBP6.61□□□□□ -1.35
ATXN3-219ENST00000553488 ERN1O75460 977 aaKnown RBP6.61□□□□□ -1.35
ATXN3-219ENST00000553488 COX7A2P14406 83 aa6.61□□□□□ -1.35
ATXN3-219ENST00000553488 EPORP19235 508 aa6.61□□□□□ -1.35
ATXN3-219ENST00000553488 TNNI3P19429 210 aa6.61□□□□□ -1.35
ATXN3-219ENST00000553488 ATP5A1P25705 553 aaKnown RBP6.61□□□□□ -1.35
ATXN3-219ENST00000553488 PTPN6P29350 595 aa6.61□□□□□ -1.35
ATXN3-219ENST00000553488 SERPINB3P29508 390 aa6.61□□□□□ -1.35
ATXN3-219ENST00000553488 HNMTP50135 292 aa6.61□□□□□ -1.35
ATXN3-219ENST00000553488 NAGLUP54802 743 aa6.61□□□□□ -1.35
ATXN3-219ENST00000553488 SLC37A1P57057 533 aa6.61□□□□□ -1.35
ATXN3-219ENST00000553488 FBXW4P57775 412 aa6.61□□□□□ -1.35
ATXN3-219ENST00000553488 PLIN5Q00G26 463 aa6.61□□□□□ -1.35
ATXN3-219ENST00000553488 E2F2Q14209 437 aa6.61□□□□□ -1.35
ATXN3-219ENST00000553488 CAPRIN1Q14444 709 aaKnown RBP6.61□□□□□ -1.35
ATXN3-219ENST00000553488 ZNF460Q14592 562 aa6.61□□□□□ -1.35
ATXN3-219ENST00000553488 SF3B4Q15427 424 aaKnown RBP eCLIP6.61□□□□□ -1.35
ATXN3-219ENST00000553488 EIPR1Q53HC9 387 aa6.61□□□□□ -1.35
ATXN3-219ENST00000553488 TEDDM1Q5T9Z0 273 aa6.61□□□□□ -1.35
ATXN3-219ENST00000553488 PLXDC2Q6UX71 529 aa6.61□□□□□ -1.35
ATXN3-219ENST00000553488 LUZP2Q86TE4 346 aa6.61□□□□□ -1.35
ATXN3-219ENST00000553488 OR4N5Q8IXE1 308 aa6.61□□□□□ -1.35
ATXN3-219ENST00000553488 KRT78Q8N1N4 520 aa6.61□□□□□ -1.35
ATXN3-219ENST00000553488 ACOT4Q8N9L9 421 aa6.61□□□□□ -1.35
ATXN3-219ENST00000553488 ZPLD1Q8TCW7 415 aa6.61□□□□□ -1.35
ATXN3-219ENST00000553488 ANKRD49Q8WVL7 239 aa6.61□□□□□ -1.35
ATXN3-219ENST00000553488 MAIP1Q8WWC4 291 aa6.61□□□□□ -1.35
ATXN3-219ENST00000553488 SLC44A1Q8WWI5 657 aa6.61□□□□□ -1.35
ATXN3-219ENST00000553488 ANKRD7Q92527 254 aa6.61□□□□□ -1.35
ATXN3-219ENST00000553488 DIO2Q92813 273 aa6.61□□□□□ -1.35
ATXN3-219ENST00000553488 PPWD1Q96BP3 646 aaKnown RBP6.61□□□□□ -1.35
ATXN3-219ENST00000553488 CERS2Q96G23 380 aa6.61□□□□□ -1.35
ATXN3-219ENST00000553488 TMEM41AQ96HV5 264 aa6.61□□□□□ -1.35
ATXN3-219ENST00000553488 ART5Q96L15 291 aa6.61□□□□□ -1.35
ATXN3-219ENST00000553488 RILPQ96NA2 401 aa6.61□□□□□ -1.35
ATXN3-219ENST00000553488 ZFP3Q96NJ6 502 aa6.61□□□□□ -1.35
ATXN3-219ENST00000553488 DGAT2Q96PD7 388 aa6.61□□□□□ -1.35
ATXN3-219ENST00000553488 CCL19Q99731 98 aa6.61□□□□□ -1.35
ATXN3-219ENST00000553488 TUBA1CQ9BQE3 449 aa6.61□□□□□ -1.35
ATXN3-219ENST00000553488 ANGPTL4Q9BY76 406 aa6.61□□□□□ -1.35
ATXN3-219ENST00000553488 TNFRSF12AQ9NP84 129 aa6.61□□□□□ -1.35
ATXN3-219ENST00000553488 GPRC5BQ9NZH0 403 aa6.61□□□□□ -1.35
ATXN3-219ENST00000553488 CLCF1Q9UBD9 225 aa6.61□□□□□ -1.35
ATXN3-219ENST00000553488 CORO1CQ9ULV4 474 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms