RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 SERPINA11Q86U17 422 aa3.84□□□□□ -1.79
USP44-208ENST00000552440 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.84□□□□□ -1.79
USP44-208ENST00000552440 NUDCD3Q8IVD9 361 aa3.84□□□□□ -1.79
USP44-208ENST00000552440 MUC20Q8N307 709 aaPredicted RBP3.84□□□□□ -1.79
USP44-208ENST00000552440 ALLCQ8N6M5 410 aa3.84□□□□□ -1.79
USP44-208ENST00000552440 FBXL13Q8NEE6 735 aa3.84□□□□□ -1.79
USP44-208ENST00000552440 OR51L1Q8NGJ5 315 aa3.84□□□□□ -1.79
USP44-208ENST00000552440 MAP4K1Q92918 833 aa3.84□□□□□ -1.79
USP44-208ENST00000552440 HIST1H2ACQ93077 130 aa3.84□□□□□ -1.79
USP44-208ENST00000552440 OTULINQ96BN8 352 aa3.84□□□□□ -1.79
USP44-208ENST00000552440 LGALS12Q96DT0 336 aa3.84□□□□□ -1.79
USP44-208ENST00000552440 ZNF274Q96GC6 653 aaPredicted RBP3.84□□□□□ -1.79
USP44-208ENST00000552440 SH3YL1Q96HL8 342 aaPredicted RBP3.84□□□□□ -1.79
USP44-208ENST00000552440 SGK494Q96LW2 274 aa3.84□□□□□ -1.79
USP44-208ENST00000552440 AIFM2Q9BRQ8 373 aa3.84□□□□□ -1.79
USP44-208ENST00000552440 POTEKPQ9BYX7 375 aa3.84□□□□□ -1.79
USP44-208ENST00000552440 SEMA4CQ9C0C4 833 aa3.84□□□□□ -1.79
USP44-208ENST00000552440 MARCH7Q9H992 704 aa3.84□□□□□ -1.79
USP44-208ENST00000552440 NT5MQ9NPB1 228 aa3.84□□□□□ -1.79
USP44-208ENST00000552440 CLEC5AQ9NY25 188 aa3.84□□□□□ -1.79
USP44-208ENST00000552440 ASIC5Q9NY37 505 aa3.84□□□□□ -1.79
USP44-208ENST00000552440 NLGN3Q9NZ94 848 aa3.84□□□□□ -1.79
USP44-208ENST00000552440 PSMC3IPQ9P2W1 217 aaPredicted RBP3.84□□□□□ -1.79
USP44-208ENST00000552440 WDR83OSQ9Y284 106 aa3.84□□□□□ -1.79
USP44-208ENST00000552440 EXOGQ9Y2C4 368 aaKnown RBP3.84□□□□□ -1.79
USP44-208ENST00000552440 POLA1P09884 1462 aaPredicted RBP3.84□□□□□ -1.79
USP44-208ENST00000552440 PPIAL4CA0A0B4J2A2 164 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 TRBV11-1A0A0K0K1C0 115 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 HHLA1C9JL84 531 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 F8W810 466 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 BTN3A3O00478 584 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 RNF8O76064 485 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 CCNB2O95067 398 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 MT-CO3P00414 261 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 EGFP01133 1207 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 MT-ND2P03891 347 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 PNMA6AP0CW24 399 aaPredicted RBP3.84□□□□□ -1.8
USP44-208ENST00000552440 PPIAL4GP0DN37 164 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 ETS2P15036 469 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 CYP11B1P15538 503 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 ACADSP16219 412 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 IL12BP29460 328 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 PPIAP62937 165 aaKnown RBP3.84□□□□□ -1.8
USP44-208ENST00000552440 EEF1A2Q05639 463 aaKnown RBP3.84□□□□□ -1.8
USP44-208ENST00000552440 PMS2P3Q13401 168 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 PKP1Q13835 747 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 NONOQ15233 471 aaKnown RBP eCLIP3.84□□□□□ -1.8
USP44-208ENST00000552440 C18orf21Q32NC0 220 aaPredicted RBP3.84□□□□□ -1.8
USP44-208ENST00000552440 CDKL4Q5MAI5 379 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 NDUFAF5Q5TEU4 345 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 LIPJQ5W064 366 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 NADSYN1Q6IA69 706 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 TMEM71Q6P5X7 295 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 ZNF841Q6ZN19 808 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 PARGQ86W56 976 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 SLC38A6Q8IZM9 456 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 C17orf78Q8N4C9 275 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 THAP8Q8NA92 274 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 TMEM104Q8NE00 496 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 OR10H4Q8NGA5 316 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 OR51G2Q8NGK0 314 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 OR52I2Q8NH67 350 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 FANK1Q8TC84 345 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 GRAMD2BQ96HH9 432 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 ZNF514Q96K75 400 aaPredicted RBP3.84□□□□□ -1.8
USP44-208ENST00000552440 CCDC17Q96LX7 622 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 Q96MF0 132 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 GLT1D1Q96MS3 346 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 CMKLR1Q99788 373 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 NDUFAF3Q9BU61 184 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 FUNDC2Q9BWH2 189 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 TSSK1BQ9BXA7 367 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 CIPCQ9C0C6 399 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 KCNN2Q9H2S1 579 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 FOXP1Q9H334 677 aaPredicted RBP3.84□□□□□ -1.8
USP44-208ENST00000552440 DHX33Q9H6R0 707 aaKnown RBP3.84□□□□□ -1.8
USP44-208ENST00000552440 Q9H8V8 135 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 CCNB1IP1Q9NPC3 277 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 CYSLTR2Q9NS75 346 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 IL37Q9NZH6 218 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 RCC2Q9P258 522 aaKnown RBP3.84□□□□□ -1.8
USP44-208ENST00000552440 LHX3Q9UBR4 397 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 EPHA6Q9UF33 1036 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 TESQ9UGI8 421 aaKnown RBP3.84□□□□□ -1.8
USP44-208ENST00000552440 PSMD13Q9UNM6 376 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 ABCG2Q9UNQ0 655 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 CFL2Q9Y281 166 aa3.84□□□□□ -1.8
USP44-208ENST00000552440 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.84□□□□□ -1.8
USP44-208ENST00000552440 DNMBPQ6XZF7 1577 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 SPATA31D1Q6ZQQ2 1576 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 DIP2BQ9P265 1576 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 ATP10DQ9P241 1426 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 TOP2BQ02880 1626 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 TRAV18A0A075B6X5 111 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 FPGTO14772 594 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 COCHO43405 550 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 EPOP01588 193 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 HLA-DRAP01903 254 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 SERPIND1P05546 499 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 FCER2P06734 321 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms