RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 C12orf43Q96C57 262 aaKnown RBP10.79□□□□□ -0.68
RAB5C-208ENST00000551338 SLC35A4Q96G79 324 aa10.79□□□□□ -0.68
RAB5C-208ENST00000551338 SHDQ96IW2 340 aa10.79□□□□□ -0.68
RAB5C-208ENST00000551338 HSPA12BQ96MM6 686 aa10.79□□□□□ -0.68
RAB5C-208ENST00000551338 SIGLEC11Q96RL6 698 aa10.79□□□□□ -0.68
RAB5C-208ENST00000551338 NODALQ96S42 347 aa10.79□□□□□ -0.68
RAB5C-208ENST00000551338 DOK1Q99704 481 aa10.79□□□□□ -0.68
RAB5C-208ENST00000551338 ARHGDIGQ99819 225 aa10.79□□□□□ -0.68
RAB5C-208ENST00000551338 CCDC3Q9BQI4 270 aa10.79□□□□□ -0.68
RAB5C-208ENST00000551338 RHNO1Q9BSD3 238 aa10.79□□□□□ -0.68
RAB5C-208ENST00000551338 PINK1Q9BXM7 581 aa10.79□□□□□ -0.68
RAB5C-208ENST00000551338 NAA50Q9GZZ1 169 aaKnown RBP10.79□□□□□ -0.68
RAB5C-208ENST00000551338 LHPPQ9H008 270 aa10.79□□□□□ -0.68
RAB5C-208ENST00000551338 QRSL1Q9H0R6 528 aaKnown RBP10.79□□□□□ -0.68
RAB5C-208ENST00000551338 DUSP21Q9H596 190 aa10.79□□□□□ -0.68
RAB5C-208ENST00000551338 TBC1D17Q9HA65 648 aa10.79□□□□□ -0.68
RAB5C-208ENST00000551338 CXorf21Q9HAI6 301 aa10.79□□□□□ -0.68
RAB5C-208ENST00000551338 VCX3AQ9NNX9 186 aa10.79□□□□□ -0.68
RAB5C-208ENST00000551338 STARD5Q9NSY2 213 aa10.79□□□□□ -0.68
RAB5C-208ENST00000551338 ERVK-18Q9QC07 812 aa10.79□□□□□ -0.68
RAB5C-208ENST00000551338 SNX5Q9Y5X3 404 aa10.79□□□□□ -0.68
RAB5C-208ENST00000551338 CDH23Q9H251 3354 aa10.79□□□□□ -0.68
RAB5C-208ENST00000551338 SLC9B1P1A6NJY1 282 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 SYT5O00445 386 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 FAAHO00519 579 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 CASC3O15234 703 aaKnown RBP10.78□□□□□ -0.68
RAB5C-208ENST00000551338 FAM20BO75063 409 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 LDB3O75112 727 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 RDH16O75452 317 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 UBXN7O94888 489 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 MED26O95402 600 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 GASTP01350 101 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 MT-ND2P03891 347 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 ALPPP05187 535 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 IFI6P09912 130 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 PORP16435 677 aaPredicted RBP10.78□□□□□ -0.68
RAB5C-208ENST00000551338 GABRB1P18505 474 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 CAPZBP47756 277 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 GSSP48637 474 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 MASP1P48740 699 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 PDX1P52945 283 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 SH3BGRP55822 239 aaPredicted RBP10.78□□□□□ -0.68
RAB5C-208ENST00000551338 CHRNEQ04844 493 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 SMN1Q16637 294 aaKnown RBP10.78□□□□□ -0.68
RAB5C-208ENST00000551338 PROX2Q3B8N5 592 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 FGD3Q5JSP0 725 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 DCST1Q5T197 706 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 GPR107Q5VW38 600 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 CWF19L1Q69YN2 538 aaKnown RBP10.78□□□□□ -0.68
RAB5C-208ENST00000551338 KLHL17Q6TDP4 642 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 FRRS1Q6ZNA5 592 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 VRK2Q86Y07 508 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 OR6T1Q8NGN1 323 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 ZNF420Q8TAQ5 688 aaPredicted RBP10.78□□□□□ -0.68
RAB5C-208ENST00000551338 FAM81AQ8TBF8 368 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 ADAMTS15Q8TE58 950 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 DOK4Q8TEW6 326 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 CDS1Q92903 461 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 GTPBP3Q969Y2 492 aaKnown RBP10.78□□□□□ -0.68
RAB5C-208ENST00000551338 COL26A1Q96A83 441 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 CLDN23Q96B33 292 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 CNDP2Q96KP4 475 aaKnown RBP10.78□□□□□ -0.68
RAB5C-208ENST00000551338 PRRC1Q96M27 445 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 TRNT1Q96Q11 434 aaKnown RBP10.78□□□□□ -0.68
RAB5C-208ENST00000551338 NELL2Q99435 816 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 MAP3K3Q99759 626 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 SPATA5L1Q9BVQ7 753 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 MIR1-1HGQ9H1L0 117 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 LIN28AQ9H9Z2 209 aaKnown RBP10.78□□□□□ -0.68
RAB5C-208ENST00000551338 SLC24A3Q9HC58 644 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 ZNF226Q9NYT6 803 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 MAT2BQ9NZL9 334 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 CALML5Q9NZT1 146 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 PTGFRNQ9P2B2 879 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 C19orf53Q9UNZ5 99 aaPredicted RBP10.78□□□□□ -0.68
RAB5C-208ENST00000551338 LIPT1Q9Y234 373 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 TPRKBQ9Y3C4 175 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 CHST2Q9Y4C5 530 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 SPACA6W5XKT8 324 aa10.78□□□□□ -0.68
RAB5C-208ENST00000551338 A0A087WV62 115 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 ZAR1LA6NP61 321 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 K7ESF4 209 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 SGK494L7N484 410 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 AQP9O43315 295 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 GPR75O95800 540 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 ADAP00813 363 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 ATP1B1P05026 303 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 SPTBP11277 2137 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 POU2F1P14859 743 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 FOSL2P15408 326 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 ROR2Q01974 943 aaKnown RBP10.77□□□□□ -0.69
RAB5C-208ENST00000551338 TEKQ02763 1124 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 MGAT2Q10469 447 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 TUBA3CQ13748 450 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 DUSP5Q16690 384 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 PRICKLE4Q2TBC4 344 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 FAM214AQ32MH5 1076 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 TRMT12Q53H54 448 aaKnown RBP10.77□□□□□ -0.69
RAB5C-208ENST00000551338 ATAD3BQ5T9A4 648 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 PGBD2Q6P3X8 592 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms