RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 TMCC3Q9ULS5 477 aa10.47□□□□□ -0.73
LINC00661-204ENST00000549354 HCN4Q9Y3Q4 1203 aa10.47□□□□□ -0.73
LINC00661-204ENST00000549354 SPIN1Q9Y657 262 aaPredicted RBP10.47□□□□□ -0.73
LINC00661-204ENST00000549354 MTCH2Q9Y6C9 303 aa10.47□□□□□ -0.73
LINC00661-204ENST00000549354 PRR19A6NJB7 356 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 OR52A4PA6NMU1 304 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 MEN1O00255 615 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 TSPAN19P0C672 248 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 ERGP11308 486 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 CTHP32929 405 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 PNLIPRP1P54315 467 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 VEZF1Q14119 521 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 FGL2Q14314 439 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 SEC23BQ15437 767 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 SPHARQ15513 63 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 Q5BKY6 102 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 PDZK1Q5T2W1 519 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 CASP12Q6UXS9 341 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 SLCO4C1Q6ZQN7 724 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 FAM83HQ6ZRV2 1179 aaPredicted RBP10.46□□□□□ -0.73
LINC00661-204ENST00000549354 USP30Q70CQ3 517 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 CCDC190Q86UF4 302 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 PDZD3Q86UT5 571 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 ATCAYQ86WG3 371 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 CCDC116Q8IYX3 515 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 HORMAD2Q8N7B1 307 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 ASB15Q8WXK1 588 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 ZG16BQ96DA0 208 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 FZD3Q9NPG1 666 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 RPRD1BQ9NQG5 326 aaKnown RBP10.46□□□□□ -0.73
LINC00661-204ENST00000549354 WSB2Q9NYS7 404 aaPredicted RBP10.46□□□□□ -0.73
LINC00661-204ENST00000549354 A0A1W2PQF6 199 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 A0A1W2PQL4 384 aaPredicted RBP10.46□□□□□ -0.73
LINC00661-204ENST00000549354 C1orf226A1L170 272 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 FABP12A6NFH5 140 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 TLR4O00206 839 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 NARSO43776 548 aaKnown RBP10.46□□□□□ -0.73
LINC00661-204ENST00000549354 MAPK12P53778 367 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 CRISP1P54107 249 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 LIM2P55344 173 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 GPAT3Q53EU6 434 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 METRNLQ641Q3 311 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 PLAG1Q6DJT9 500 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 KIAA1211LQ6NV74 962 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 IL20RBQ6UXL0 311 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 UBQLNLQ8IYU4 475 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 FRMD1Q8N878 549 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 IL17RCQ8NAC3 791 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 MTERF3Q96E29 417 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 ST6GAL2Q96JF0 529 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 LGR4Q9BXB1 951 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 MVB12BQ9H7P6 319 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 CXorf36Q9H7Y0 433 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 CLDND1Q9NY35 253 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 SCML1Q9UN30 329 aa10.46□□□□□ -0.73
LINC00661-204ENST00000549354 ZC3H12DA2A288 527 aaKnown RBP10.46□□□□□ -0.74
LINC00661-204ENST00000549354 ZNF860A6NHJ4 632 aa10.46□□□□□ -0.74
LINC00661-204ENST00000549354 CPSF4LA6NMK7 179 aaKnown RBP10.46□□□□□ -0.74
LINC00661-204ENST00000549354 PRMT3O60678 531 aa10.46□□□□□ -0.74
LINC00661-204ENST00000549354 IFNW1P05000 195 aa10.46□□□□□ -0.74
LINC00661-204ENST00000549354 HBQ1P09105 142 aa10.46□□□□□ -0.74
LINC00661-204ENST00000549354 NPPBP16860 134 aa10.46□□□□□ -0.74
LINC00661-204ENST00000549354 FUT1P19526 365 aa10.46□□□□□ -0.74
LINC00661-204ENST00000549354 TIE1P35590 1138 aa10.46□□□□□ -0.74
LINC00661-204ENST00000549354 RPS21P63220 83 aaKnown RBP10.46□□□□□ -0.74
LINC00661-204ENST00000549354 OLR1P78380 273 aa10.46□□□□□ -0.74
LINC00661-204ENST00000549354 ZNF79Q15937 498 aa10.46□□□□□ -0.74
LINC00661-204ENST00000549354 SNAPC1Q16533 368 aa10.46□□□□□ -0.74
LINC00661-204ENST00000549354 MPEG1Q2M385 716 aa10.46□□□□□ -0.74
LINC00661-204ENST00000549354 CCDC58Q4VC31 144 aa10.46□□□□□ -0.74
LINC00661-204ENST00000549354 SETD7Q8WTS6 366 aaKnown RBP10.46□□□□□ -0.74
LINC00661-204ENST00000549354 CHAC2Q8WUX2 184 aa10.46□□□□□ -0.74
LINC00661-204ENST00000549354 TMEM19Q96HH6 336 aa10.46□□□□□ -0.74
LINC00661-204ENST00000549354 RACGAP1Q9H0H5 632 aa10.46□□□□□ -0.74
LINC00661-204ENST00000549354 POLR2J3Q9H1A7 115 aaKnown RBP10.46□□□□□ -0.74
LINC00661-204ENST00000549354 PRO3102Q9H379 93 aa10.46□□□□□ -0.74
LINC00661-204ENST00000549354 MBNL1Q9NR56 388 aaKnown RBP10.46□□□□□ -0.74
LINC00661-204ENST00000549354 TEX10Q9NXF1 929 aaPredicted RBP10.46□□□□□ -0.74
LINC00661-204ENST00000549354 ATP6V1HQ9UI12 483 aa10.46□□□□□ -0.74
LINC00661-204ENST00000549354 PADI2Q9Y2J8 665 aa10.46□□□□□ -0.74
LINC00661-204ENST00000549354 PLEKHM1Q9Y4G2 1056 aa10.46□□□□□ -0.74
LINC00661-204ENST00000549354 A0A1W2PP55 124 aa10.45□□□□□ -0.74
LINC00661-204ENST00000549354 CCDC182A6NF36 153 aa10.45□□□□□ -0.74
LINC00661-204ENST00000549354 DVL2O14641 736 aa10.45□□□□□ -0.74
LINC00661-204ENST00000549354 HRO43593 1189 aa10.45□□□□□ -0.74
LINC00661-204ENST00000549354 CSO75390 466 aaKnown RBP10.45□□□□□ -0.74
LINC00661-204ENST00000549354 PAK4O96013 591 aaPredicted RBP10.45□□□□□ -0.74
LINC00661-204ENST00000549354 PSKH1P11801 424 aa10.45□□□□□ -0.74
LINC00661-204ENST00000549354 SDC2P34741 201 aa10.45□□□□□ -0.74
LINC00661-204ENST00000549354 CD79BP40259 229 aa10.45□□□□□ -0.74
LINC00661-204ENST00000549354 MSANTD1Q6ZTZ1 278 aa10.45□□□□□ -0.74
LINC00661-204ENST00000549354 ASB18Q6ZVZ8 466 aa10.45□□□□□ -0.74
LINC00661-204ENST00000549354 RRM2BQ7LG56 351 aa10.45□□□□□ -0.74
LINC00661-204ENST00000549354 IQCHQ86VS3 1027 aa10.45□□□□□ -0.74
LINC00661-204ENST00000549354 AMZ2Q86W34 360 aa10.45□□□□□ -0.74
LINC00661-204ENST00000549354 PIP5K1AQ99755 562 aa10.45□□□□□ -0.74
LINC00661-204ENST00000549354 NLNQ9BYT8 704 aa10.45□□□□□ -0.74
LINC00661-204ENST00000549354 MKRN2Q9H000 416 aaKnown RBP10.45□□□□□ -0.74
LINC00661-204ENST00000549354 C11orf54Q9H0W9 315 aaPredicted RBP10.45□□□□□ -0.74
LINC00661-204ENST00000549354 EGLN3Q9H6Z9 239 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms