RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 WIPI1Q5MNZ9 446 aaPredicted RBP11.72□□□□□ -0.53
PTCH1-218ENST00000548945 DCST1Q5T197 706 aa11.72□□□□□ -0.53
PTCH1-218ENST00000548945 MROH9Q5TGP6 573 aa11.72□□□□□ -0.53
PTCH1-218ENST00000548945 EEF1A1P5Q5VTE0 462 aa11.72□□□□□ -0.53
PTCH1-218ENST00000548945 ADGRE4PQ86SQ3 457 aa11.72□□□□□ -0.53
PTCH1-218ENST00000548945 BIVMQ86UB2 503 aa11.72□□□□□ -0.53
PTCH1-218ENST00000548945 FAM83FQ8NEG4 500 aaPredicted RBP11.72□□□□□ -0.53
PTCH1-218ENST00000548945 DTNBP1Q96EV8 351 aa11.72□□□□□ -0.53
PTCH1-218ENST00000548945 DACH2Q96NX9 599 aa11.72□□□□□ -0.53
PTCH1-218ENST00000548945 TM9SF2Q99805 663 aa11.72□□□□□ -0.53
PTCH1-218ENST00000548945 SFXN3Q9BWM7 321 aa11.72□□□□□ -0.53
PTCH1-218ENST00000548945 NOL11Q9H8H0 719 aaKnown RBP11.72□□□□□ -0.53
PTCH1-218ENST00000548945 METTL7AQ9H8H3 244 aa11.72□□□□□ -0.53
PTCH1-218ENST00000548945 CPSF2Q9P2I0 782 aaKnown RBP11.72□□□□□ -0.53
PTCH1-218ENST00000548945 ZNF639Q9UID6 485 aa11.72□□□□□ -0.53
PTCH1-218ENST00000548945 CES1P1Q9UKY3 287 aa11.72□□□□□ -0.53
PTCH1-218ENST00000548945 EXO1Q9UQ84 846 aaKnown RBP11.72□□□□□ -0.53
PTCH1-218ENST00000548945 UQCRHLA0A096LP55 91 aa11.71□□□□□ -0.53
PTCH1-218ENST00000548945 C1orf226A1L170 272 aa11.71□□□□□ -0.53
PTCH1-218ENST00000548945 CLCA1A8K7I4 914 aa11.71□□□□□ -0.53
PTCH1-218ENST00000548945 STX16-NPEPL1H3BU86 382 aa11.71□□□□□ -0.53
PTCH1-218ENST00000548945 STX16O14662 325 aa11.71□□□□□ -0.53
PTCH1-218ENST00000548945 GNB5O14775 395 aa11.71□□□□□ -0.53
PTCH1-218ENST00000548945 SNPHO15079 494 aa11.71□□□□□ -0.53
PTCH1-218ENST00000548945 ERN1O75460 977 aaKnown RBP11.71□□□□□ -0.53
PTCH1-218ENST00000548945 CBR3O75828 277 aa11.71□□□□□ -0.53
PTCH1-218ENST00000548945 SIX3O95343 332 aaPredicted RBP11.71□□□□□ -0.53
PTCH1-218ENST00000548945 ALDOAP04075 364 aaKnown RBP11.71□□□□□ -0.53
PTCH1-218ENST00000548945 KLK1P06870 262 aa11.71□□□□□ -0.53
PTCH1-218ENST00000548945 TMIGD3P0DMS9 266 aaPredicted RBP11.71□□□□□ -0.53
PTCH1-218ENST00000548945 NT5EP21589 574 aa11.71□□□□□ -0.53
PTCH1-218ENST00000548945 TYK2P29597 1187 aa11.71□□□□□ -0.53
PTCH1-218ENST00000548945 SERPINB8P50452 374 aa11.71□□□□□ -0.53
PTCH1-218ENST00000548945 CCNG1P51959 295 aa11.71□□□□□ -0.53
PTCH1-218ENST00000548945 MAPK12P53778 367 aa11.71□□□□□ -0.53
PTCH1-218ENST00000548945 DCAF7P61962 342 aa11.71□□□□□ -0.53
PTCH1-218ENST00000548945 C2orf54Q08AI8 447 aa11.71□□□□□ -0.53
PTCH1-218ENST00000548945 IFT88Q13099 833 aa11.71□□□□□ -0.53
PTCH1-218ENST00000548945 PRICKLE4Q2TBC4 344 aa11.71□□□□□ -0.53
PTCH1-218ENST00000548945 GGTA1PQ4G0N0 100 aa11.71□□□□□ -0.53
PTCH1-218ENST00000548945 TECRLQ5HYJ1 363 aa11.71□□□□□ -0.53
PTCH1-218ENST00000548945 TEX35Q5T0J7 233 aa11.71□□□□□ -0.53
PTCH1-218ENST00000548945 CCNYL2Q5T2Q4 361 aa11.71□□□□□ -0.53
PTCH1-218ENST00000548945 SLC48A1Q6P1K1 146 aa11.71□□□□□ -0.53
PTCH1-218ENST00000548945 ENPP6Q6UWR7 440 aa11.71□□□□□ -0.53
PTCH1-218ENST00000548945 ZDHHC24Q6UX98 284 aa11.71□□□□□ -0.53
PTCH1-218ENST00000548945 ANGPTL8Q6UXH0 198 aa11.71□□□□□ -0.53
PTCH1-218ENST00000548945 PRR22Q8IZ63 422 aa11.71□□□□□ -0.53
PTCH1-218ENST00000548945 METTL4Q8N3J2 472 aa11.71□□□□□ -0.53
PTCH1-218ENST00000548945 C9orf106Q8NAJ2 232 aa11.71□□□□□ -0.53
PTCH1-218ENST00000548945 LRRN4CLQ8ND94 238 aa11.71□□□□□ -0.53
PTCH1-218ENST00000548945 OR52B6Q8NGF0 335 aa11.71□□□□□ -0.53
PTCH1-218ENST00000548945 SMPDL3BQ92485 455 aa11.71□□□□□ -0.53
PTCH1-218ENST00000548945 HGDQ93099 445 aa11.71□□□□□ -0.53
PTCH1-218ENST00000548945 ATP6V1E2Q96A05 226 aa11.71□□□□□ -0.53
PTCH1-218ENST00000548945 ISL2Q96A47 359 aa11.71□□□□□ -0.53
PTCH1-218ENST00000548945 LCORQ96JN0 433 aaPredicted RBP11.71□□□□□ -0.53
PTCH1-218ENST00000548945 LRRC1Q9BTT6 524 aa11.71□□□□□ -0.53
PTCH1-218ENST00000548945 OSBPL11Q9BXB4 747 aa11.71□□□□□ -0.53
PTCH1-218ENST00000548945 MRPL1Q9BYD6 325 aaKnown RBP11.71□□□□□ -0.53
PTCH1-218ENST00000548945 OR2B2Q9GZK3 357 aa11.71□□□□□ -0.53
PTCH1-218ENST00000548945 ACBD3Q9H3P7 528 aa11.71□□□□□ -0.53
PTCH1-218ENST00000548945 PSME2Q9UL46 239 aa11.71□□□□□ -0.53
PTCH1-218ENST00000548945 DTX4Q9Y2E6 619 aa11.71□□□□□ -0.53
PTCH1-218ENST00000548945 PCDHA9Q9Y5H5 950 aa11.71□□□□□ -0.53
PTCH1-218ENST00000548945 ROS1P08922 2347 aa11.7□□□□□ -0.54
PTCH1-218ENST00000548945 TO15178 435 aa11.7□□□□□ -0.54
PTCH1-218ENST00000548945 ICOSLGO75144 302 aa11.7□□□□□ -0.54
PTCH1-218ENST00000548945 RCBTB2O95199 551 aa11.7□□□□□ -0.54
PTCH1-218ENST00000548945 HRGP04196 525 aa11.7□□□□□ -0.54
PTCH1-218ENST00000548945 RBP1P09455 135 aa11.7□□□□□ -0.54
PTCH1-218ENST00000548945 DRD2P14416 443 aa11.7□□□□□ -0.54
PTCH1-218ENST00000548945 CSNK2A2P19784 350 aaPredicted RBP11.7□□□□□ -0.54
PTCH1-218ENST00000548945 DRD5P21918 477 aa11.7□□□□□ -0.54
PTCH1-218ENST00000548945 CHMP24386 653 aa11.7□□□□□ -0.54
PTCH1-218ENST00000548945 HOXC12P31275 282 aa11.7□□□□□ -0.54
PTCH1-218ENST00000548945 ARL1P40616 181 aaPredicted RBP11.7□□□□□ -0.54
PTCH1-218ENST00000548945 PTGDSP41222 190 aa11.7□□□□□ -0.54
PTCH1-218ENST00000548945 PPICP45877 212 aa11.7□□□□□ -0.54
PTCH1-218ENST00000548945 PCYT1AP49585 367 aa11.7□□□□□ -0.54
PTCH1-218ENST00000548945 PSPHP78330 225 aa11.7□□□□□ -0.54
PTCH1-218ENST00000548945 MGAT2Q10469 447 aa11.7□□□□□ -0.54
PTCH1-218ENST00000548945 TRAF3Q13114 568 aa11.7□□□□□ -0.54
PTCH1-218ENST00000548945 TTC19Q6DKK2 380 aaPredicted RBP11.7□□□□□ -0.54
PTCH1-218ENST00000548945 COMMD6Q7Z4G1 85 aa11.7□□□□□ -0.54
PTCH1-218ENST00000548945 YRDCQ86U90 279 aaKnown RBP11.7□□□□□ -0.54
PTCH1-218ENST00000548945 MMGT1Q8N4V1 131 aa11.7□□□□□ -0.54
PTCH1-218ENST00000548945 PTGR2Q8N8N7 351 aaPredicted RBP11.7□□□□□ -0.54
PTCH1-218ENST00000548945 LINC01560Q8TB33 94 aa11.7□□□□□ -0.54
PTCH1-218ENST00000548945 WNT2BQ93097 391 aa11.7□□□□□ -0.54
PTCH1-218ENST00000548945 CTHRC1Q96CG8 243 aa11.7□□□□□ -0.54
PTCH1-218ENST00000548945 OMA1Q96E52 524 aa11.7□□□□□ -0.54
PTCH1-218ENST00000548945 CDK15Q96Q40 435 aa11.7□□□□□ -0.54
PTCH1-218ENST00000548945 TUBA1CQ9BQE3 449 aa11.7□□□□□ -0.54
PTCH1-218ENST00000548945 YIPF4Q9BSR8 244 aa11.7□□□□□ -0.54
PTCH1-218ENST00000548945 RBM24Q9BX46 236 aaKnown RBP11.7□□□□□ -0.54
PTCH1-218ENST00000548945 PIGMQ9H3S5 423 aa11.7□□□□□ -0.54
PTCH1-218ENST00000548945 GSX1Q9H4S2 264 aaPredicted RBP11.7□□□□□ -0.54
PTCH1-218ENST00000548945 BRF2Q9HAW0 419 aa11.7□□□□□ -0.54
PTCH1-218ENST00000548945 NEUROD4Q9HD90 331 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms