RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 DDX31Q9H8H2 851 aaKnown RBP7.73□□□□□ -1.17
TROAP-208ENST00000548817 PROK2Q9HC23 129 aa7.73□□□□□ -1.17
TROAP-208ENST00000548817 SMYD2Q9NRG4 433 aa7.73□□□□□ -1.17
TROAP-208ENST00000548817 ZNF701Q9NV72 531 aaPredicted RBP7.73□□□□□ -1.17
TROAP-208ENST00000548817 TEX10Q9NXF1 929 aaPredicted RBP7.73□□□□□ -1.17
TROAP-208ENST00000548817 JKAMPQ9P055 326 aa7.73□□□□□ -1.17
TROAP-208ENST00000548817 WHRNQ9P202 907 aa7.73□□□□□ -1.17
TROAP-208ENST00000548817 RNF14Q9UBS8 474 aa7.73□□□□□ -1.17
TROAP-208ENST00000548817 NDRG3Q9UGV2 375 aa7.73□□□□□ -1.17
TROAP-208ENST00000548817 CFL2Q9Y281 166 aa7.73□□□□□ -1.17
TROAP-208ENST00000548817 C15orf41Q9Y2V0 281 aa7.73□□□□□ -1.17
TROAP-208ENST00000548817 TSC22D4Q9Y3Q8 395 aa7.73□□□□□ -1.17
TROAP-208ENST00000548817 TNPO3Q9Y5L0 923 aaKnown RBP7.73□□□□□ -1.17
TROAP-208ENST00000548817 IKBKGQ9Y6K9 419 aa7.73□□□□□ -1.17
TROAP-208ENST00000548817 USF3Q68DE3 2245 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 RAI1Q7Z5J4 1906 aaPredicted RBP7.72□□□□□ -1.17
TROAP-208ENST00000548817 DOCK7Q96N67 2140 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 A0A087X1B8 175 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 A0A1W2PR48 441 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 TCRBV9S1A1TA0A576 114 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 CCDC189A1A4V9 331 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 FAM187AA6NFU0 413 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 FAM159BA6NKW6 160 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 A8MV72 311 aaPredicted RBP7.72□□□□□ -1.17
TROAP-208ENST00000548817 H0YIV9 168 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 KCNAB3O43448 404 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 UGDHO60701 494 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 EEDO75530 441 aaKnown RBP7.72□□□□□ -1.17
TROAP-208ENST00000548817 PRKRAO75569 313 aaKnown RBP7.72□□□□□ -1.17
TROAP-208ENST00000548817 AIFM1O95831 613 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 PORP16435 677 aaPredicted RBP7.72□□□□□ -1.17
TROAP-208ENST00000548817 NAGAP17050 411 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 SSTR4P31391 388 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 STX2P32856 288 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 BSGP35613 385 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 CASP3P42574 277 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 XKP51811 444 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 ZNF136P52737 540 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 WNT3P56703 355 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 ETF1P62495 437 aaKnown RBP7.72□□□□□ -1.17
TROAP-208ENST00000548817 TNK1Q13470 666 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 NAB1Q13506 487 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 GTF2H2Q13888 395 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 CAPRIN1Q14444 709 aaKnown RBP7.72□□□□□ -1.17
TROAP-208ENST00000548817 ETFDHQ16134 617 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 PFKFB4Q16877 469 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 KBTBD12Q3ZCT8 623 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 EIPR1Q53HC9 387 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 NHSL2Q5HYW2 709 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 WIPI1Q5MNZ9 446 aaPredicted RBP7.72□□□□□ -1.17
TROAP-208ENST00000548817 TIGD3Q6B0B8 471 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 SLC30A6Q6NXT4 461 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 GTF2H2CQ6P1K8 395 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 BHLHB9Q6PI77 547 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 ANGPTL8Q6UXH0 198 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 CHMP1BQ7LBR1 199 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 NUP54Q7Z3B4 507 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 CMC1Q7Z7K0 106 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 CCDC25Q86WR0 208 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 CREG2Q8IUH2 290 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 PRR22Q8IZ63 422 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 MNS1Q8NEH6 495 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 OR14L1PQ8NHC6 308 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 ZPLD1Q8TCW7 415 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 TMEM41AQ96HV5 264 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 ZFP3Q96NJ6 502 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 TM9SF2Q99805 663 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 ERP44Q9BS26 406 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 RBM24Q9BX46 236 aaKnown RBP7.72□□□□□ -1.17
TROAP-208ENST00000548817 UGT2B28Q9BY64 529 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 PLA2G12AQ9BZM1 189 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 IPPKQ9H8X2 491 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 CXorf21Q9HAI6 301 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 YAE1D1Q9NRH1 226 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 PSD3Q9NYI0 1048 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 KLRF1Q9NZS2 232 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 BCAP29Q9UHQ4 241 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 PSME2Q9UL46 239 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 ASB4Q9Y574 426 aa7.72□□□□□ -1.17
TROAP-208ENST00000548817 A0A0A6YYD5 115 aa7.71□□□□□ -1.18
TROAP-208ENST00000548817 MBD3L3A6NE82 208 aaPredicted RBP7.71□□□□□ -1.18
TROAP-208ENST00000548817 GOLGA6L10A6NI86 522 aa7.71□□□□□ -1.18
TROAP-208ENST00000548817 WASHC1A8K0Z3 465 aa7.71□□□□□ -1.18
TROAP-208ENST00000548817 H0Y3Z8 333 aa7.71□□□□□ -1.18
TROAP-208ENST00000548817 FOXE1O00358 373 aaPredicted RBP7.71□□□□□ -1.18
TROAP-208ENST00000548817 PGRMC2O15173 223 aa7.71□□□□□ -1.18
TROAP-208ENST00000548817 TMPRSS11DO60235 418 aa7.71□□□□□ -1.18
TROAP-208ENST00000548817 PPM1BO75688 479 aa7.71□□□□□ -1.18
TROAP-208ENST00000548817 CBR3O75828 277 aa7.71□□□□□ -1.18
TROAP-208ENST00000548817 CLDN9O95484 217 aa7.71□□□□□ -1.18
TROAP-208ENST00000548817 TUBBP07437 444 aa7.71□□□□□ -1.18
TROAP-208ENST00000548817 ABCD3P28288 659 aa7.71□□□□□ -1.18
TROAP-208ENST00000548817 PCYT1AP49585 367 aa7.71□□□□□ -1.18
TROAP-208ENST00000548817 NEK2P51955 445 aa7.71□□□□□ -1.18
TROAP-208ENST00000548817 CCNG1P51959 295 aa7.71□□□□□ -1.18
TROAP-208ENST00000548817 ALDH18A1P54886 795 aaKnown RBP7.71□□□□□ -1.18
TROAP-208ENST00000548817 CAV1Q03135 178 aa7.71□□□□□ -1.18
TROAP-208ENST00000548817 SRYQ05066 204 aa7.71□□□□□ -1.18
TROAP-208ENST00000548817 FUT7Q11130 342 aa7.71□□□□□ -1.18
TROAP-208ENST00000548817 IFT88Q13099 833 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms