RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 SCMH1Q96GD3 660 aa3.89□□□□□ -1.79
CBX5-203ENST00000547872 COX14Q96I36 57 aa3.89□□□□□ -1.79
CBX5-203ENST00000547872 C3orf30Q96M34 536 aa3.89□□□□□ -1.79
CBX5-203ENST00000547872 C12orf66Q96MD2 445 aa3.89□□□□□ -1.79
CBX5-203ENST00000547872 ZNF396Q96N95 335 aaPredicted RBP3.89□□□□□ -1.79
CBX5-203ENST00000547872 CSF3RQ99062 836 aa3.89□□□□□ -1.79
CBX5-203ENST00000547872 C11orf70Q9BRQ4 267 aa3.89□□□□□ -1.79
CBX5-203ENST00000547872 KRTAP1-5Q9BYS1 174 aa3.89□□□□□ -1.79
CBX5-203ENST00000547872 ATG10Q9H0Y0 220 aa3.89□□□□□ -1.79
CBX5-203ENST00000547872 BRF2Q9HAW0 419 aa3.89□□□□□ -1.79
CBX5-203ENST00000547872 NT5MQ9NPB1 228 aa3.89□□□□□ -1.79
CBX5-203ENST00000547872 MKKSQ9NPJ1 570 aaPredicted RBP3.89□□□□□ -1.79
CBX5-203ENST00000547872 PCDHB16Q9NRJ7 776 aa3.89□□□□□ -1.79
CBX5-203ENST00000547872 SEPT11Q9NVA2 429 aaKnown RBP3.89□□□□□ -1.79
CBX5-203ENST00000547872 HAO1Q9UJM8 370 aa3.89□□□□□ -1.79
CBX5-203ENST00000547872 CHKBQ9Y259 395 aa3.89□□□□□ -1.79
CBX5-203ENST00000547872 COQ4Q9Y3A0 265 aa3.89□□□□□ -1.79
CBX5-203ENST00000547872 MAU2Q9Y6X3 613 aa3.89□□□□□ -1.79
CBX5-203ENST00000547872 MDC1Q14676 2089 aaKnown RBP3.89□□□□□ -1.79
CBX5-203ENST00000547872 DCHS2Q6V1P9 2916 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 SAA2-SAA4A0A096LPE2 208 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 TRAV17A0A0B4J275 112 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 SMTNL1A8MU46 457 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 A8MUI8 341 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 IFNL4K9M1U5 179 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 EEF2KO00418 725 aaKnown RBP3.88□□□□□ -1.79
CBX5-203ENST00000547872 MAP2K7O14733 419 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 SLC16A5O15375 505 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 HCRTR1O43613 425 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 SEC14L2O76054 403 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 PDE9AO76083 593 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 PGLSO95336 258 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 PPP1R3DO95685 299 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 TSPAN12O95859 305 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 WDPCPO95876 746 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 IGHEP01854 428 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 RAF1P04049 648 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 CYC1P08574 325 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 ZNF30P17039 623 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 DDX5P17844 614 aaKnown RBP3.88□□□□□ -1.79
CBX5-203ENST00000547872 XRCC1P18887 633 aaPredicted RBP3.88□□□□□ -1.79
CBX5-203ENST00000547872 IDSP22304 550 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 PRCPP42785 496 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 SYKP43405 635 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 OR1D4P47884 311 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 TNFSF10P50591 281 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 SNX16P57768 344 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 AP1S1P61966 158 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 DCDP81605 110 aaKnown RBP3.88□□□□□ -1.79
CBX5-203ENST00000547872 RPL36AP83881 106 aaKnown RBP3.88□□□□□ -1.79
CBX5-203ENST00000547872 GCNT1Q02742 428 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 RUNX1T1Q06455 604 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 DLG1Q12959 904 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 OLIG2Q13516 323 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 PNOCQ13519 176 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 NFE2L1Q14494 772 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 FGFBP1Q14512 234 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 SYCP1Q15431 976 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 CTF1Q16619 201 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 C2orf68Q2NKX9 166 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 CCDC14Q49A88 953 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 ZNF789Q5FWF6 425 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 METTL2BQ6P1Q9 378 aaKnown RBP3.88□□□□□ -1.79
CBX5-203ENST00000547872 FAM122CQ6P4D5 195 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 WDR73Q6P4I2 378 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 CNSTQ6PJW8 725 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 PAMR1Q6UXH9 720 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 KRBA2Q6ZNG9 492 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 QSOX2Q6ZRP7 698 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 CDHR3Q6ZTQ4 885 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 C18orf65Q6ZTR6 163 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 CDC20BQ86Y33 519 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 NPWQ8N729 165 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 TMEM35BQ8NCS4 154 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 ZNF397Q8NF99 534 aaPredicted RBP3.88□□□□□ -1.79
CBX5-203ENST00000547872 METTL6Q8TCB7 284 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 HCAR2Q8TDS4 363 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 PTERQ96BW5 349 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 PGAP3Q96FM1 320 aaPredicted RBP3.88□□□□□ -1.79
CBX5-203ENST00000547872 PERPQ96FX8 193 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 METTL2AQ96IZ6 378 aaKnown RBP3.88□□□□□ -1.79
CBX5-203ENST00000547872 IP6K3Q96PC2 410 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 ZNF385AQ96PM9 386 aaKnown RBP3.88□□□□□ -1.79
CBX5-203ENST00000547872 FAM110AQ9BQ89 295 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 HAUS8Q9BT25 410 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 WWP1Q9H0M0 922 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 CARD9Q9H257 536 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 DHX35Q9H5Z1 703 aaKnown RBP3.88□□□□□ -1.79
CBX5-203ENST00000547872 XKR8Q9H6D3 395 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 ESRP2Q9H6T0 727 aaKnown RBP3.88□□□□□ -1.79
CBX5-203ENST00000547872 KCNJ16Q9NPI9 418 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 HINT3Q9NQE9 182 aaKnown RBP3.88□□□□□ -1.79
CBX5-203ENST00000547872 FAM207AQ9NSI2 230 aaPredicted RBP3.88□□□□□ -1.79
CBX5-203ENST00000547872 STMN3Q9NZ72 180 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 SMARCAL1Q9NZC9 954 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 PKD2L2Q9NZM6 624 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 VPS18Q9P253 973 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 CTSFQ9UBX1 484 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 TTC7AQ9ULT0 858 aaPredicted RBP3.88□□□□□ -1.79
CBX5-203ENST00000547872 MTMR6Q9Y217 621 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms