RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 ADAMTS17Q8TE56 1095 aa14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 ZNF721Q8TF20 911 aa14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 KAT2AQ92830 837 aa14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 PPWD1Q96BP3 646 aaKnown RBP14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 GIMAP5Q96F15 307 aa14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 REXO5Q96IC2 774 aaKnown RBP14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 RAB3IPQ96QF0 476 aaPredicted RBP14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 LMF2Q9BU23 707 aaKnown RBP14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 CNPPD1Q9BV87 410 aa14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 IL1RL2Q9HB29 575 aa14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 MMP25Q9NPA2 562 aa14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 SLC6A13Q9NSD5 602 aa14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 EXD2Q9NVH0 621 aa14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 HEMK1Q9Y5R4 338 aaPredicted RBP14.91□□□□□ -0.02
PRPF40A-212ENST00000545856 NCOR2Q9Y618 2525 aa14.9□□□□□ -0.02
PRPF40A-212ENST00000545856 NSG1A0A0A6YYJ2 146 aa14.9□□□□□ -0.02
PRPF40A-212ENST00000545856 FAM220BPB1ANY3 271 aa14.9□□□□□ -0.02
PRPF40A-212ENST00000545856 ACOX3O15254 700 aa14.9□□□□□ -0.02
PRPF40A-212ENST00000545856 GSC2O15499 205 aa14.9□□□□□ -0.02
PRPF40A-212ENST00000545856 CT62P0C5K7 136 aa14.9□□□□□ -0.02
PRPF40A-212ENST00000545856 EFNA1P20827 205 aaPredicted RBP14.9□□□□□ -0.02
PRPF40A-212ENST00000545856 SOX18P35713 384 aa14.9□□□□□ -0.02
PRPF40A-212ENST00000545856 MVDP53602 400 aa14.9□□□□□ -0.02
PRPF40A-212ENST00000545856 SLC26A5P58743 744 aa14.9□□□□□ -0.02
PRPF40A-212ENST00000545856 VEZF1Q14119 521 aa14.9□□□□□ -0.02
PRPF40A-212ENST00000545856 CAPRIN1Q14444 709 aaKnown RBP14.9□□□□□ -0.02
PRPF40A-212ENST00000545856 ZNF630Q2M218 657 aaPredicted RBP14.9□□□□□ -0.02
PRPF40A-212ENST00000545856 TRMT12Q53H54 448 aaKnown RBP14.9□□□□□ -0.02
PRPF40A-212ENST00000545856 ATAD3BQ5T9A4 648 aa14.9□□□□□ -0.02
PRPF40A-212ENST00000545856 AP1ARQ63HQ0 302 aa14.9□□□□□ -0.02
PRPF40A-212ENST00000545856 JMJD6Q6NYC1 403 aaPredicted RBP14.9□□□□□ -0.02
PRPF40A-212ENST00000545856 FAM111BQ6SJ93 734 aa14.9□□□□□ -0.02
PRPF40A-212ENST00000545856 KIRREL2Q6UWL6 708 aa14.9□□□□□ -0.02
PRPF40A-212ENST00000545856 SLC29A4Q7RTT9 530 aa14.9□□□□□ -0.02
PRPF40A-212ENST00000545856 ERMP1Q7Z2K6 904 aa14.9□□□□□ -0.02
PRPF40A-212ENST00000545856 MRGPREQ86SM8 312 aa14.9□□□□□ -0.02
PRPF40A-212ENST00000545856 CALHM3Q86XJ0 350 aa14.9□□□□□ -0.02
PRPF40A-212ENST00000545856 SHISA5Q8N114 240 aa14.9□□□□□ -0.02
PRPF40A-212ENST00000545856 OR52R1Q8NGF1 315 aa14.9□□□□□ -0.02
PRPF40A-212ENST00000545856 KCNE4Q8WWG9 221 aa14.9□□□□□ -0.02
PRPF40A-212ENST00000545856 TP53INP1Q96A56 240 aa14.9□□□□□ -0.02
PRPF40A-212ENST00000545856 IMMP1LQ96LU5 166 aa14.9□□□□□ -0.02
PRPF40A-212ENST00000545856 VSTM2LQ96N03 204 aa14.9□□□□□ -0.02
PRPF40A-212ENST00000545856 BTBD9Q96Q07 612 aa14.9□□□□□ -0.02
PRPF40A-212ENST00000545856 OR8D2Q9GZM6 311 aa14.9□□□□□ -0.02
PRPF40A-212ENST00000545856 PIGUQ9H490 435 aa14.9□□□□□ -0.02
PRPF40A-212ENST00000545856 ALG2Q9H553 416 aa14.9□□□□□ -0.02
PRPF40A-212ENST00000545856 CALML5Q9NZT1 146 aa14.9□□□□□ -0.02
PRPF40A-212ENST00000545856 ANGPTL2Q9UKU9 493 aa14.9□□□□□ -0.02
PRPF40A-212ENST00000545856 OR2W5A6NFC9 320 aa14.89□□□□□ -0.03
PRPF40A-212ENST00000545856 ZNF891A8MT65 544 aaPredicted RBP14.89□□□□□ -0.03
PRPF40A-212ENST00000545856 NKX2-2O95096 273 aa14.89□□□□□ -0.03
PRPF40A-212ENST00000545856 MATN1P21941 496 aa14.89□□□□□ -0.03
PRPF40A-212ENST00000545856 LCN1P31025 176 aa14.89□□□□□ -0.03
PRPF40A-212ENST00000545856 PPICP45877 212 aa14.89□□□□□ -0.03
PRPF40A-212ENST00000545856 EMDP50402 254 aa14.89□□□□□ -0.03
PRPF40A-212ENST00000545856 PGDP52209 483 aa14.89□□□□□ -0.03
PRPF40A-212ENST00000545856 RRADP55042 308 aa14.89□□□□□ -0.03
PRPF40A-212ENST00000545856 CLN3Q13286 438 aa14.89□□□□□ -0.03
PRPF40A-212ENST00000545856 LASP1Q14847 261 aaKnown RBP14.89□□□□□ -0.03
PRPF40A-212ENST00000545856 GTDC1Q4AE62 458 aa14.89□□□□□ -0.03
PRPF40A-212ENST00000545856 PIGGQ5H8A4 983 aa14.89□□□□□ -0.03
PRPF40A-212ENST00000545856 INTS11Q5TA45 600 aaKnown RBP14.89□□□□□ -0.03
PRPF40A-212ENST00000545856 ANGPTL8Q6UXH0 198 aa14.89□□□□□ -0.03
PRPF40A-212ENST00000545856 HSDL2Q6YN16 418 aa14.89□□□□□ -0.03
PRPF40A-212ENST00000545856 DGAT2L6Q6ZPD8 337 aa14.89□□□□□ -0.03
PRPF40A-212ENST00000545856 SZRD1Q7Z422 152 aa14.89□□□□□ -0.03
PRPF40A-212ENST00000545856 RNF130Q86XS8 419 aa14.89□□□□□ -0.03
PRPF40A-212ENST00000545856 KBTBD2Q8IY47 623 aa14.89□□□□□ -0.03
PRPF40A-212ENST00000545856 APCDD1LQ8NCL9 501 aa14.89□□□□□ -0.03
PRPF40A-212ENST00000545856 C11orf65Q8NCR3 313 aa14.89□□□□□ -0.03
PRPF40A-212ENST00000545856 OR5AK3PQ8NH89 298 aa14.89□□□□□ -0.03
PRPF40A-212ENST00000545856 FBXO27Q8NI29 283 aa14.89□□□□□ -0.03
PRPF40A-212ENST00000545856 ADAMTS15Q8TE58 950 aa14.89□□□□□ -0.03
PRPF40A-212ENST00000545856 FER1L6-AS2Q96M78 137 aa14.89□□□□□ -0.03
PRPF40A-212ENST00000545856 CDRT15Q96T59 188 aa14.89□□□□□ -0.03
PRPF40A-212ENST00000545856 SLC39A3Q9BRY0 314 aa14.89□□□□□ -0.03
PRPF40A-212ENST00000545856 POLE3Q9NRF9 147 aa14.89□□□□□ -0.03
PRPF40A-212ENST00000545856 ADA2Q9NZK5 511 aa14.89□□□□□ -0.03
PRPF40A-212ENST00000545856 P2RX2Q9UBL9 471 aa14.89□□□□□ -0.03
PRPF40A-212ENST00000545856 SUCOQ9UBS9 1254 aaKnown RBP14.89□□□□□ -0.03
PRPF40A-212ENST00000545856 BCAP29Q9UHQ4 241 aa14.89□□□□□ -0.03
PRPF40A-212ENST00000545856 MRTO4Q9UKD2 239 aaKnown RBP14.89□□□□□ -0.03
PRPF40A-212ENST00000545856 SSUH2Q9Y2M2 353 aa14.89□□□□□ -0.03
PRPF40A-212ENST00000545856 ANKRD11Q6UB99 2663 aaPredicted RBP14.89□□□□□ -0.03
PRPF40A-212ENST00000545856 NME4O00746 187 aa14.88□□□□□ -0.03
PRPF40A-212ENST00000545856 TNFRSF21O75509 655 aa14.88□□□□□ -0.03
PRPF40A-212ENST00000545856 ZFAND5O76080 213 aa14.88□□□□□ -0.03
PRPF40A-212ENST00000545856 CLPSP04118 112 aa14.88□□□□□ -0.03
PRPF40A-212ENST00000545856 ALOX5P09917 674 aa14.88□□□□□ -0.03
PRPF40A-212ENST00000545856 LIFP15018 202 aa14.88□□□□□ -0.03
PRPF40A-212ENST00000545856 DRD5P21918 477 aa14.88□□□□□ -0.03
PRPF40A-212ENST00000545856 ME2P23368 584 aa14.88□□□□□ -0.03
PRPF40A-212ENST00000545856 F8A1P23610 371 aa14.88□□□□□ -0.03
PRPF40A-212ENST00000545856 HTR1EP28566 365 aa14.88□□□□□ -0.03
PRPF40A-212ENST00000545856 PGM1P36871 562 aa14.88□□□□□ -0.03
PRPF40A-212ENST00000545856 CRATP43155 626 aa14.88□□□□□ -0.03
PRPF40A-212ENST00000545856 MAN2A2P49641 1150 aa14.88□□□□□ -0.03
PRPF40A-212ENST00000545856 PSMD4P55036 377 aaKnown RBP14.88□□□□□ -0.03
PRPF40A-212ENST00000545856 MTPNP58546 118 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms