RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 PLSCR3Q9NRY6 295 aa3.17□□□□□ -1.9
SNHG1-224ENST00000545688 RNF24Q9Y225 148 aa3.17□□□□□ -1.9
SNHG1-224ENST00000545688 NTNG1Q9Y2I2 539 aa3.17□□□□□ -1.9
SNHG1-224ENST00000545688 COL4A1P02462 1669 aa3.17□□□□□ -1.9
SNHG1-224ENST00000545688 XIRP2A4UGR9 3374 aa3.16□□□□□ -1.9
SNHG1-224ENST00000545688 ILVBLA1L0T0 632 aa3.16□□□□□ -1.9
SNHG1-224ENST00000545688 HTATSF1O43719 755 aaKnown RBP3.16□□□□□ -1.9
SNHG1-224ENST00000545688 SELENOFO60613 162 aa3.16□□□□□ -1.9
SNHG1-224ENST00000545688 DUSP11O75319 330 aaKnown RBP3.16□□□□□ -1.9
SNHG1-224ENST00000545688 ODC1P11926 461 aa3.16□□□□□ -1.9
SNHG1-224ENST00000545688 KRT20P35900 424 aa3.16□□□□□ -1.9
SNHG1-224ENST00000545688 FNTAP49354 379 aa3.16□□□□□ -1.9
SNHG1-224ENST00000545688 ZNF41P51814 821 aaPredicted RBP3.16□□□□□ -1.9
SNHG1-224ENST00000545688 ERVPABLB-1P60509 514 aa3.16□□□□□ -1.9
SNHG1-224ENST00000545688 CXCL6P80162 114 aa3.16□□□□□ -1.9
SNHG1-224ENST00000545688 SLC17A1Q14916 467 aa3.16□□□□□ -1.9
SNHG1-224ENST00000545688 C14orf28Q4W4Y0 310 aa3.16□□□□□ -1.9
SNHG1-224ENST00000545688 PM20D1Q6GTS8 502 aa3.16□□□□□ -1.9
SNHG1-224ENST00000545688 PPP1R42Q7Z4L9 355 aa3.16□□□□□ -1.9
SNHG1-224ENST00000545688 DZIP1Q86YF9 867 aaKnown RBP3.16□□□□□ -1.9
SNHG1-224ENST00000545688 SGF29Q96ES7 293 aa3.16□□□□□ -1.9
SNHG1-224ENST00000545688 FERMT1Q9BQL6 677 aa3.16□□□□□ -1.9
SNHG1-224ENST00000545688 UTP14AQ9BVJ6 771 aaKnown RBP3.16□□□□□ -1.9
SNHG1-224ENST00000545688 EXOC6BQ9Y2D4 811 aa3.16□□□□□ -1.9
SNHG1-224ENST00000545688 DNAH12Q6ZR08 3092 aa3.15□□□□□ -1.9
SNHG1-224ENST00000545688 WI2-2373I1.2A0A1W2PRP0 233 aa3.15□□□□□ -1.91
SNHG1-224ENST00000545688 HTR3EA5X5Y0 456 aa3.15□□□□□ -1.91
SNHG1-224ENST00000545688 OR6A2O95222 327 aa3.15□□□□□ -1.91
SNHG1-224ENST00000545688 LYPD3O95274 346 aa3.15□□□□□ -1.91
SNHG1-224ENST00000545688 NPBWR1P48145 328 aa3.15□□□□□ -1.91
SNHG1-224ENST00000545688 CAPZA1P52907 286 aa3.15□□□□□ -1.91
SNHG1-224ENST00000545688 SLC25A1P53007 311 aa3.15□□□□□ -1.91
SNHG1-224ENST00000545688 RIPK4P57078 832 aa3.15□□□□□ -1.91
SNHG1-224ENST00000545688 GSTO1P78417 241 aa3.15□□□□□ -1.91
SNHG1-224ENST00000545688 PAX2Q02962 417 aa3.15□□□□□ -1.91
SNHG1-224ENST00000545688 CNPY1Q3B7I2 92 aa3.15□□□□□ -1.91
SNHG1-224ENST00000545688 ABRAXAS1Q6UWZ7 409 aa3.15□□□□□ -1.91
SNHG1-224ENST00000545688 SIPA1Q96FS4 1042 aa3.15□□□□□ -1.91
SNHG1-224ENST00000545688 CNDP2Q96KP4 475 aaKnown RBP3.15□□□□□ -1.91
SNHG1-224ENST00000545688 INTS14Q96SY0 518 aa3.15□□□□□ -1.91
SNHG1-224ENST00000545688 SDHCQ99643 169 aaPredicted RBP3.15□□□□□ -1.91
SNHG1-224ENST00000545688 ZCCHC17Q9NP64 241 aaKnown RBP3.15□□□□□ -1.91
SNHG1-224ENST00000545688 ABCC13Q9NSE7 274 aa3.15□□□□□ -1.91
SNHG1-224ENST00000545688 MOKQ9UQ07 419 aa3.15□□□□□ -1.91
SNHG1-224ENST00000545688 COL1A1P02452 1464 aaPredicted RBP3.15□□□□□ -1.91
SNHG1-224ENST00000545688 CACNA1AO00555 2505 aa3.15□□□□□ -1.91
SNHG1-224ENST00000545688 NUP98P52948 1817 aa3.14□□□□□ -1.91
SNHG1-224ENST00000545688 BDP1A6H8Y1 2624 aa3.14□□□□□ -1.91
SNHG1-224ENST00000545688 CSO75390 466 aaKnown RBP3.14□□□□□ -1.91
SNHG1-224ENST00000545688 PDGFBP01127 241 aaPredicted RBP3.14□□□□□ -1.91
SNHG1-224ENST00000545688 FCGR3AP08637 254 aa3.14□□□□□ -1.91
SNHG1-224ENST00000545688 P0C879 139 aa3.14□□□□□ -1.91
SNHG1-224ENST00000545688 CCL5P13501 91 aa3.14□□□□□ -1.91
SNHG1-224ENST00000545688 NF2P35240 595 aa3.14□□□□□ -1.91
SNHG1-224ENST00000545688 RPL27P61353 136 aaKnown RBP3.14□□□□□ -1.91
SNHG1-224ENST00000545688 RPS8P62241 208 aaKnown RBP3.14□□□□□ -1.91
SNHG1-224ENST00000545688 LCP2Q13094 533 aa3.14□□□□□ -1.91
SNHG1-224ENST00000545688 TAF7Q15545 349 aaPredicted RBP3.14□□□□□ -1.91
SNHG1-224ENST00000545688 TGIF1Q15583 401 aa3.14□□□□□ -1.91
SNHG1-224ENST00000545688 ISXQ2M1V0 245 aa3.14□□□□□ -1.91
SNHG1-224ENST00000545688 IQCCQ4KMZ1 466 aa3.14□□□□□ -1.91
SNHG1-224ENST00000545688 WDR25Q64LD2 544 aaPredicted RBP3.14□□□□□ -1.91
SNHG1-224ENST00000545688 ALKBH5Q6P6C2 394 aaKnown RBP3.14□□□□□ -1.91
SNHG1-224ENST00000545688 APOBEC3FQ8IUX4 373 aaKnown RBP3.14□□□□□ -1.91
SNHG1-224ENST00000545688 FBXO16Q8IX29 292 aaPredicted RBP3.14□□□□□ -1.91
SNHG1-224ENST00000545688 OR1K1Q8NGR3 316 aa3.14□□□□□ -1.91
SNHG1-224ENST00000545688 LINC01006Q8NI28 216 aa3.14□□□□□ -1.91
SNHG1-224ENST00000545688 ATG101Q9BSB4 218 aa3.14□□□□□ -1.91
SNHG1-224ENST00000545688 DEFB129Q9H1M3 183 aa3.14□□□□□ -1.91
SNHG1-224ENST00000545688 PFDN4Q9NQP4 134 aa3.14□□□□□ -1.91
SNHG1-224ENST00000545688 ANAPC5Q9UJX4 755 aa3.14□□□□□ -1.91
SNHG1-224ENST00000545688 ANKRD36CQ5JPF3 1778 aa3.14□□□□□ -1.91
SNHG1-224ENST00000545688 MUC6Q6W4X9 2439 aa3.14□□□□□ -1.91
SNHG1-224ENST00000545688 SH3TC1Q8TE82 1336 aa3.14□□□□□ -1.91
SNHG1-224ENST00000545688 TMEM129A0AVI4 362 aa3.13□□□□□ -1.91
SNHG1-224ENST00000545688 CCT8L1PA6NM43 557 aa3.13□□□□□ -1.91
SNHG1-224ENST00000545688 RNF212BA8MTL3 300 aa3.13□□□□□ -1.91
SNHG1-224ENST00000545688 P4HA1P13674 534 aa3.13□□□□□ -1.91
SNHG1-224ENST00000545688 HSD17B1P14061 328 aa3.13□□□□□ -1.91
SNHG1-224ENST00000545688 PGAM2P15259 253 aa3.13□□□□□ -1.91
SNHG1-224ENST00000545688 KIAA0040Q15053 153 aa3.13□□□□□ -1.91
SNHG1-224ENST00000545688 RALBP1Q15311 655 aa3.13□□□□□ -1.91
SNHG1-224ENST00000545688 PPP1R3AQ16821 1122 aa3.13□□□□□ -1.91
SNHG1-224ENST00000545688 ANKRD55Q3KP44 614 aa3.13□□□□□ -1.91
SNHG1-224ENST00000545688 HSP90AB3PQ58FF7 597 aa3.13□□□□□ -1.91
SNHG1-224ENST00000545688 AGAP6Q5VW22 663 aa3.13□□□□□ -1.91
SNHG1-224ENST00000545688 WSCD1Q658N2 575 aa3.13□□□□□ -1.91
SNHG1-224ENST00000545688 ZNF544Q6NX49 715 aa3.13□□□□□ -1.91
SNHG1-224ENST00000545688 IGFL3Q6UXB1 125 aa3.13□□□□□ -1.91
SNHG1-224ENST00000545688 SPATA19Q7Z5L4 167 aa3.13□□□□□ -1.91
SNHG1-224ENST00000545688 ADGRD2Q7Z7M1 963 aa3.13□□□□□ -1.91
SNHG1-224ENST00000545688 KIAA0895Q8NCT3 520 aa3.13□□□□□ -1.91
SNHG1-224ENST00000545688 ZNF671Q8TAW3 534 aa3.13□□□□□ -1.91
SNHG1-224ENST00000545688 ZNF564Q8TBZ8 553 aaPredicted RBP3.13□□□□□ -1.91
SNHG1-224ENST00000545688 VN1R17PQ8TDU5 208 aa3.13□□□□□ -1.91
SNHG1-224ENST00000545688 FAM122AQ96E09 287 aa3.13□□□□□ -1.91
SNHG1-224ENST00000545688 CCT8L2Q96SF2 557 aa3.13□□□□□ -1.91
SNHG1-224ENST00000545688 CDX2Q99626 313 aaPredicted RBP3.13□□□□□ -1.91
SNHG1-224ENST00000545688 TTYH2Q9BSA4 534 aa3.13□□□□□ -1.91
SNHG1-224ENST00000545688 LSG1Q9H089 658 aaKnown RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms