RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 PGRMC2O15173 223 aa13.3□□□□□ -0.28
RTN3-214ENST00000545432 TO15178 435 aa13.3□□□□□ -0.28
RTN3-214ENST00000545432 CD5LO43866 347 aa13.3□□□□□ -0.28
RTN3-214ENST00000545432 SH3BGRLO75368 114 aa13.3□□□□□ -0.28
RTN3-214ENST00000545432 EEDO75530 441 aaKnown RBP13.3□□□□□ -0.28
RTN3-214ENST00000545432 THBDP07204 575 aa13.3□□□□□ -0.28
RTN3-214ENST00000545432 FAM58BPP0C7Q3 252 aa13.3□□□□□ -0.28
RTN3-214ENST00000545432 POU2F1P14859 743 aa13.3□□□□□ -0.28
RTN3-214ENST00000545432 CLDN15P56746 228 aa13.3□□□□□ -0.28
RTN3-214ENST00000545432 B3GALT5-AS1P59052 145 aa13.3□□□□□ -0.28
RTN3-214ENST00000545432 ATP6V0D1P61421 351 aa13.3□□□□□ -0.28
RTN3-214ENST00000545432 POU4F1Q01851 419 aa13.3□□□□□ -0.28
RTN3-214ENST00000545432 MGAT5Q09328 741 aa13.3□□□□□ -0.28
RTN3-214ENST00000545432 MGAT2Q10469 447 aa13.3□□□□□ -0.28
RTN3-214ENST00000545432 OR4D1Q15615 310 aa13.3□□□□□ -0.28
RTN3-214ENST00000545432 ETFDHQ16134 617 aa13.3□□□□□ -0.28
RTN3-214ENST00000545432 BEX5Q5H9J7 111 aa13.3□□□□□ -0.28
RTN3-214ENST00000545432 GRHL2Q6ISB3 625 aa13.3□□□□□ -0.28
RTN3-214ENST00000545432 AAGABQ6PD74 315 aa13.3□□□□□ -0.28
RTN3-214ENST00000545432 PLCZ1Q86YW0 608 aa13.3□□□□□ -0.28
RTN3-214ENST00000545432 GALNT12Q8IXK2 581 aa13.3□□□□□ -0.28
RTN3-214ENST00000545432 PRR22Q8IZ63 422 aa13.3□□□□□ -0.28
RTN3-214ENST00000545432 OR14L1PQ8NHC6 308 aa13.3□□□□□ -0.28
RTN3-214ENST00000545432 GRK7Q8WTQ7 553 aa13.3□□□□□ -0.28
RTN3-214ENST00000545432 OPN3Q9H1Y3 402 aaPredicted RBP13.3□□□□□ -0.28
RTN3-214ENST00000545432 METTL7AQ9H8H3 244 aa13.3□□□□□ -0.28
RTN3-214ENST00000545432 GALNT9Q9HCQ5 603 aa13.3□□□□□ -0.28
RTN3-214ENST00000545432 TAS2R10Q9NYW0 307 aa13.3□□□□□ -0.28
RTN3-214ENST00000545432 ZNF639Q9UID6 485 aa13.3□□□□□ -0.28
RTN3-214ENST00000545432 MAPRE3Q9UPY8 281 aa13.3□□□□□ -0.28
RTN3-214ENST00000545432 EXPH5Q8NEV8 1989 aa13.29□□□□□ -0.28
RTN3-214ENST00000545432 A0A087X1B8 175 aa13.29□□□□□ -0.28
RTN3-214ENST00000545432 GLOD5A6NK44 160 aa13.29□□□□□ -0.28
RTN3-214ENST00000545432 B4DXG7 233 aa13.29□□□□□ -0.28
RTN3-214ENST00000545432 ACOX3O15254 700 aa13.29□□□□□ -0.28
RTN3-214ENST00000545432 SMNDC1O75940 238 aaKnown RBP eCLIP13.29□□□□□ -0.28
RTN3-214ENST00000545432 NR2F6P10588 404 aa13.29□□□□□ -0.28
RTN3-214ENST00000545432 NID1P14543 1247 aa13.29□□□□□ -0.28
RTN3-214ENST00000545432 PTX3P26022 381 aaPredicted RBP13.29□□□□□ -0.28
RTN3-214ENST00000545432 ATP5J2P56134 94 aa13.29□□□□□ -0.28
RTN3-214ENST00000545432 HMGCS1Q01581 520 aa13.29□□□□□ -0.28
RTN3-214ENST00000545432 OCRLQ01968 901 aa13.29□□□□□ -0.28
RTN3-214ENST00000545432 MAP4K2Q12851 820 aa13.29□□□□□ -0.28
RTN3-214ENST00000545432 CUL3Q13618 768 aa13.29□□□□□ -0.28
RTN3-214ENST00000545432 ADAM5Q6NVV9 412 aa13.29□□□□□ -0.28
RTN3-214ENST00000545432 ZNF550Q7Z398 422 aa13.29□□□□□ -0.28
RTN3-214ENST00000545432 IFNEQ86WN2 208 aa13.29□□□□□ -0.28
RTN3-214ENST00000545432 PDIK1LQ8N165 341 aa13.29□□□□□ -0.28
RTN3-214ENST00000545432 RNF175Q8N4F7 328 aa13.29□□□□□ -0.28
RTN3-214ENST00000545432 SPATA6LQ8N4H0 392 aa13.29□□□□□ -0.28
RTN3-214ENST00000545432 UBTD2Q8WUN7 234 aa13.29□□□□□ -0.28
RTN3-214ENST00000545432 MS4A14Q96JA4 679 aa13.29□□□□□ -0.28
RTN3-214ENST00000545432 PBKQ96KB5 322 aa13.29□□□□□ -0.28
RTN3-214ENST00000545432 FAM111AQ96PZ2 611 aa13.29□□□□□ -0.28
RTN3-214ENST00000545432 REG4Q9BYZ8 158 aa13.29□□□□□ -0.28
RTN3-214ENST00000545432 HEY2Q9UBP5 337 aa13.29□□□□□ -0.28
RTN3-214ENST00000545432 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.28□□□□□ -0.28
RTN3-214ENST00000545432 C2orf72A6NCS6 295 aa13.28□□□□□ -0.28
RTN3-214ENST00000545432 RNF223E7ERA6 249 aa13.28□□□□□ -0.28
RTN3-214ENST00000545432 HS3ST1O14792 307 aa13.28□□□□□ -0.28
RTN3-214ENST00000545432 CCNT2O60583 730 aaKnown RBP13.28□□□□□ -0.28
RTN3-214ENST00000545432 UGT2B11O75310 529 aa13.28□□□□□ -0.28
RTN3-214ENST00000545432 TNFRSF21O75509 655 aa13.28□□□□□ -0.28
RTN3-214ENST00000545432 CCDC166P0CW27 439 aa13.28□□□□□ -0.28
RTN3-214ENST00000545432 PCNAP12004 261 aa13.28□□□□□ -0.28
RTN3-214ENST00000545432 PPP3CBP16298 524 aa13.28□□□□□ -0.28
RTN3-214ENST00000545432 KRT15P19012 456 aa13.28□□□□□ -0.28
RTN3-214ENST00000545432 TBXA2RP21731 343 aa13.28□□□□□ -0.28
RTN3-214ENST00000545432 CDC25BP30305 580 aa13.28□□□□□ -0.28
RTN3-214ENST00000545432 RAP1GDS1P52306 607 aa13.28□□□□□ -0.28
RTN3-214ENST00000545432 FGFBP1Q14512 234 aa13.28□□□□□ -0.28
RTN3-214ENST00000545432 CLEC12BQ2HXU8 276 aa13.28□□□□□ -0.28
RTN3-214ENST00000545432 OR52E8Q6IFG1 317 aa13.28□□□□□ -0.28
RTN3-214ENST00000545432 ZNF704Q6ZNC4 412 aaPredicted RBP13.28□□□□□ -0.28
RTN3-214ENST00000545432 ZNF610Q8N9Z0 462 aa13.28□□□□□ -0.28
RTN3-214ENST00000545432 OMA1Q96E52 524 aa13.28□□□□□ -0.28
RTN3-214ENST00000545432 LCORQ96JN0 433 aaPredicted RBP13.28□□□□□ -0.28
RTN3-214ENST00000545432 CENPKQ9BS16 269 aa13.28□□□□□ -0.28
RTN3-214ENST00000545432 LRRC1Q9BTT6 524 aa13.28□□□□□ -0.28
RTN3-214ENST00000545432 RNF122Q9H9V4 155 aa13.28□□□□□ -0.28
RTN3-214ENST00000545432 WDR41Q9HAD4 459 aa13.28□□□□□ -0.28
RTN3-214ENST00000545432 LZTFL1Q9NQ48 299 aa13.28□□□□□ -0.28
RTN3-214ENST00000545432 CD274Q9NZQ7 290 aa13.28□□□□□ -0.28
RTN3-214ENST00000545432 CHMP2BQ9UQN3 213 aa13.28□□□□□ -0.28
RTN3-214ENST00000545432 CFL2Q9Y281 166 aa13.28□□□□□ -0.28
RTN3-214ENST00000545432 MTO1Q9Y2Z2 717 aaKnown RBP13.28□□□□□ -0.28
RTN3-214ENST00000545432 PRR14LQ5THK1 2151 aa13.28□□□□□ -0.28
RTN3-214ENST00000545432 H0YIV9 168 aa13.27□□□□□ -0.29
RTN3-214ENST00000545432 K7EPI3 171 aa13.27□□□□□ -0.29
RTN3-214ENST00000545432 PLAUP00749 431 aa13.27□□□□□ -0.29
RTN3-214ENST00000545432 CPMP14384 443 aa13.27□□□□□ -0.29
RTN3-214ENST00000545432 DRD5P21918 477 aa13.27□□□□□ -0.29
RTN3-214ENST00000545432 NR1H2P55055 460 aa13.27□□□□□ -0.29
RTN3-214ENST00000545432 MORF4L2Q15014 288 aa13.27□□□□□ -0.29
RTN3-214ENST00000545432 ZKSCAN8Q15776 578 aaPredicted RBP13.27□□□□□ -0.29
RTN3-214ENST00000545432 PRICKLE4Q2TBC4 344 aa13.27□□□□□ -0.29
RTN3-214ENST00000545432 GBP7Q8N8V2 638 aaPredicted RBP13.27□□□□□ -0.29
RTN3-214ENST00000545432 OR4K14Q8NGD5 310 aa13.27□□□□□ -0.29
RTN3-214ENST00000545432 FIG4Q92562 907 aa13.27□□□□□ -0.29
RTN3-214ENST00000545432 CFAP36Q96G28 342 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms