RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 HORMAD2Q8N7B1 307 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 MRPL43Q8N983 215 aaKnown RBP5.49□□□□□ -1.53
VPS50-220ENST00000544910 OR4K14Q8NGD5 310 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 OR5K2Q8NHB8 316 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.49□□□□□ -1.53
VPS50-220ENST00000544910 ZNF566Q969W8 418 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 ARRDC3Q96B67 414 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 MCHR1Q99705 422 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 OR51V1Q9H2C8 321 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 MKKSQ9NPJ1 570 aaPredicted RBP5.49□□□□□ -1.53
VPS50-220ENST00000544910 SAGE1Q9NXZ1 904 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 C5AR2Q9P296 337 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 TMEM202A6NGA9 273 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 GPR89AB7ZAQ6 455 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 L7N2F9 121 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 M0R129 80 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 NPC1O15118 1278 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 IFNA6P05013 189 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 ASGR2P07307 311 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 GPR89BP0CG08 455 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 GSTT2P0CG29 244 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 LCN1P31025 176 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 RAB28P51157 221 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 KCNJ10P78508 379 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 BIKQ13323 160 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 SPHARQ15513 63 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 SMN1Q16637 294 aaKnown RBP5.49□□□□□ -1.53
VPS50-220ENST00000544910 COX20Q5RI15 118 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 PLAG1Q6DJT9 500 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 HMGN2P46Q86SG4 172 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 SLC9B2Q86UD5 537 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 OR8K5Q8NH50 307 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 OR52P1PQ8NH57 321 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 GATAD2BQ8WXI9 593 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 HRASLS5Q96KN8 279 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 CD180Q99467 661 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 ACTL8Q9H568 366 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 A4GALTQ9NPC4 353 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 PSORS1C1Q9UIG5 152 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 PCDHGB7Q9Y5F8 929 aa5.49□□□□□ -1.53
VPS50-220ENST00000544910 PDCD11Q14690 1871 aaKnown RBP5.48□□□□□ -1.53
VPS50-220ENST00000544910 KRBA1A5PL33 1030 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 PCDH17O14917 1159 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 ALPPL2P10696 532 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 HOXB2P14652 356 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 IL32P24001 234 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 ARFIP1P53367 373 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 ISL1P61371 349 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 PPP3R1P63098 170 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 REEP5Q00765 189 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 RUNX3Q13761 415 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 IRF4Q15306 451 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 CCSMST1Q4G0I0 132 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 RTL4Q6ZR62 310 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 USP51Q70EK9 711 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 PARGQ86W56 976 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 KLHDC8AQ8IYD2 350 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 UBE2J2Q8N2K1 259 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 IQCF1Q8N6M8 205 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 CEP76Q8TAP6 659 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 MSANTD3Q96H12 275 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 IKZF5Q9H5V7 419 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 TMEM38AQ9H6F2 299 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 NTN4Q9HB63 628 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 C14orf119Q9NWQ9 140 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 ADAM29Q9UKF5 820 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 MGAT4AQ9UM21 535 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 CLEC4AQ9UMR7 237 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 TMEM5Q9Y2B1 443 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 SLC5A10A0PJK1 596 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 OR2AT4A6NND4 320 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 RGS9O75916 674 aaPredicted RBP5.48□□□□□ -1.53
VPS50-220ENST00000544910 OR2B3O76000 313 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 JUNDP17535 347 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 BMP8BP34820 402 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 UGT2B10P36537 528 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 TAS2R43P59537 309 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 ERVFC1P60507 584 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 TMEM52BQ4KMG9 183 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 BMP8AQ7Z5Y6 402 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 LHFPL3Q86UP9 236 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 DNAJC22Q8N4W6 341 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 INO80EQ8NBZ0 244 aaPredicted RBP5.48□□□□□ -1.53
VPS50-220ENST00000544910 OR2T33Q8NG76 320 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 ZNF486Q96H40 463 aaPredicted RBP5.48□□□□□ -1.53
VPS50-220ENST00000544910 FAM46AQ96IP4 442 aaKnown RBP5.48□□□□□ -1.53
VPS50-220ENST00000544910 LRR1Q96L50 414 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 NDC1Q9BTX1 674 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 TMEM121BQ9BXQ6 578 aaPredicted RBP5.48□□□□□ -1.53
VPS50-220ENST00000544910 GABARAPL3Q9BY60 117 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 ACTRT3Q9BYD9 372 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 HCN2Q9UL51 889 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 EDARQ9UNE0 448 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 MEMO1Q9Y316 297 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 WDR45Q9Y484 360 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 PCDHGB6Q9Y5F9 930 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 CASC3O15234 703 aaKnown RBP5.48□□□□□ -1.53
VPS50-220ENST00000544910 ZNF432O94892 652 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 GABARAPO95166 117 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 B3GALT4O96024 378 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms