RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 DCAF7P61962 342 aa17.64■□□□□ 0.41
DDX55-211ENST00000544429 NTRK2Q16620 822 aa17.64■□□□□ 0.41
DDX55-211ENST00000544429 CT45A2Q5DJT8 189 aa17.64■□□□□ 0.41
DDX55-211ENST00000544429 TMEM107Q6UX40 140 aa17.64■□□□□ 0.41
DDX55-211ENST00000544429 RTL4Q6ZR62 310 aa17.64■□□□□ 0.41
DDX55-211ENST00000544429 GALNTL5Q7Z4T8 443 aa17.64■□□□□ 0.41
DDX55-211ENST00000544429 NATD1Q8N6N6 113 aa17.64■□□□□ 0.41
DDX55-211ENST00000544429 PSD4Q8NDX1 1056 aa17.64■□□□□ 0.41
DDX55-211ENST00000544429 OR8J2Q8NGG1 315 aa17.64■□□□□ 0.41
DDX55-211ENST00000544429 GRHL3Q8TE85 626 aa17.64■□□□□ 0.41
DDX55-211ENST00000544429 FAR1Q8WVX9 515 aa17.64■□□□□ 0.41
DDX55-211ENST00000544429 TMEM125Q96AQ2 219 aa17.64■□□□□ 0.41
DDX55-211ENST00000544429 NTNG2Q96CW9 530 aa17.64■□□□□ 0.41
DDX55-211ENST00000544429 SPACA9Q96E40 222 aaPredicted RBP17.64■□□□□ 0.41
DDX55-211ENST00000544429 C5orf34Q96MH7 638 aa17.64■□□□□ 0.41
DDX55-211ENST00000544429 FRMD6Q96NE9 622 aa17.64■□□□□ 0.41
DDX55-211ENST00000544429 OR52B2Q96RD2 323 aa17.64■□□□□ 0.41
DDX55-211ENST00000544429 SLX1AQ9BQ83 275 aa17.64■□□□□ 0.41
DDX55-211ENST00000544429 BHLHE41Q9C0J9 482 aaPredicted RBP17.64■□□□□ 0.41
DDX55-211ENST00000544429 KLHL1Q9NR64 748 aa17.64■□□□□ 0.41
DDX55-211ENST00000544429 SIRT3Q9NTG7 399 aaPredicted RBP17.64■□□□□ 0.41
DDX55-211ENST00000544429 GPR45Q9Y5Y3 372 aa17.64■□□□□ 0.41
DDX55-211ENST00000544429 RP1L1Q8IWN7 2480 aaPredicted RBP17.64■□□□□ 0.41
DDX55-211ENST00000544429 SVILO95425 2214 aa17.64■□□□□ 0.41
DDX55-211ENST00000544429 GOLGA8QA0A0J9YX86 632 aa17.63■□□□□ 0.41
DDX55-211ENST00000544429 GOLGA8OA6NCC3 632 aa17.63■□□□□ 0.41
DDX55-211ENST00000544429 FRG2CA6NGY1 282 aa17.63■□□□□ 0.41
DDX55-211ENST00000544429 GOLGA8NF8WBI6 632 aa17.63■□□□□ 0.41
DDX55-211ENST00000544429 ACOX3O15254 700 aa17.63■□□□□ 0.41
DDX55-211ENST00000544429 RASAL1O95294 804 aa17.63■□□□□ 0.41
DDX55-211ENST00000544429 MAP3K8P41279 467 aa17.63■□□□□ 0.41
DDX55-211ENST00000544429 CPTPQ5TA50 214 aa17.63■□□□□ 0.41
DDX55-211ENST00000544429 TAGAPQ8N103 731 aa17.63■□□□□ 0.41
DDX55-211ENST00000544429 DNAJB8Q8NHS0 232 aa17.63■□□□□ 0.41
DDX55-211ENST00000544429 ZFP28Q8NHY6 868 aa17.63■□□□□ 0.41
DDX55-211ENST00000544429 PAQR8Q8TEZ7 354 aa17.63■□□□□ 0.41
DDX55-211ENST00000544429 STON2Q8WXE9 905 aa17.63■□□□□ 0.41
DDX55-211ENST00000544429 TESCQ96BS2 214 aa17.63■□□□□ 0.41
DDX55-211ENST00000544429 HSPBAP1Q96EW2 488 aa17.63■□□□□ 0.41
DDX55-211ENST00000544429 LCORQ96JN0 433 aaPredicted RBP17.63■□□□□ 0.41
DDX55-211ENST00000544429 PRPF18Q99633 342 aaKnown RBP17.63■□□□□ 0.41
DDX55-211ENST00000544429 TRIM4Q9C037 500 aa17.63■□□□□ 0.41
DDX55-211ENST00000544429 FOLH1BQ9HBA9 442 aa17.63■□□□□ 0.41
DDX55-211ENST00000544429 DEPPQ9NTK1 212 aa17.63■□□□□ 0.41
DDX55-211ENST00000544429 ATAD3AQ9NVI7 634 aa17.63■□□□□ 0.41
DDX55-211ENST00000544429 TAS2R9Q9NYW1 312 aa17.63■□□□□ 0.41
DDX55-211ENST00000544429 KLF13Q9Y2Y9 288 aaPredicted RBP17.63■□□□□ 0.41
DDX55-211ENST00000544429 NPFFR2Q9Y5X5 522 aa17.63■□□□□ 0.41
DDX55-211ENST00000544429 CHCHD2Q9Y6H1 151 aaPredicted RBP17.63■□□□□ 0.41
DDX55-211ENST00000544429 UBR5O95071 2799 aaPredicted RBP17.63■□□□□ 0.41
DDX55-211ENST00000544429 POLEQ07864 2286 aa17.63■□□□□ 0.41
DDX55-211ENST00000544429 J3QKU1 62 aa17.62■□□□□ 0.41
DDX55-211ENST00000544429 SCN2BO60939 215 aa17.62■□□□□ 0.41
DDX55-211ENST00000544429 COQ9O75208 318 aa17.62■□□□□ 0.41
DDX55-211ENST00000544429 NME6O75414 186 aaPredicted RBP17.62■□□□□ 0.41
DDX55-211ENST00000544429 NAGAP17050 411 aa17.62■□□□□ 0.41
DDX55-211ENST00000544429 ABCD3P28288 659 aa17.62■□□□□ 0.41
DDX55-211ENST00000544429 CDK9P50750 372 aaKnown RBP17.62■□□□□ 0.41
DDX55-211ENST00000544429 MANFP55145 182 aaKnown RBP17.62■□□□□ 0.41
DDX55-211ENST00000544429 WNT3P56703 355 aa17.62■□□□□ 0.41
DDX55-211ENST00000544429 PSG6Q00889 435 aa17.62■□□□□ 0.41
DDX55-211ENST00000544429 HSPB3Q12988 150 aa17.62■□□□□ 0.41
DDX55-211ENST00000544429 IGFBP7Q16270 282 aa17.62■□□□□ 0.41
DDX55-211ENST00000544429 MAPKAPK3Q16644 382 aa17.62■□□□□ 0.41
DDX55-211ENST00000544429 EXOSC6Q5RKV6 272 aaKnown RBP17.62■□□□□ 0.41
DDX55-211ENST00000544429 HLA-DQA1Q5Y7H0 255 aa17.62■□□□□ 0.41
DDX55-211ENST00000544429 NPSR1Q6W5P4 371 aa17.62■□□□□ 0.41
DDX55-211ENST00000544429 CEP70Q8NHQ1 597 aa17.62■□□□□ 0.41
DDX55-211ENST00000544429 TEX37Q96LM6 180 aa17.62■□□□□ 0.41
DDX55-211ENST00000544429 CLMPQ9H6B4 373 aa17.62■□□□□ 0.41
DDX55-211ENST00000544429 TIMMDC1Q9NPL8 285 aa17.62■□□□□ 0.41
DDX55-211ENST00000544429 ERVK-11Q9UQG0 969 aa17.62■□□□□ 0.41
DDX55-211ENST00000544429 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.61■□□□□ 0.41
DDX55-211ENST00000544429 EDF1O60869 148 aaKnown RBP17.61■□□□□ 0.41
DDX55-211ENST00000544429 CCL3P10147 92 aa17.61■□□□□ 0.41
DDX55-211ENST00000544429 TDGF1P3P51864 188 aa17.61■□□□□ 0.41
DDX55-211ENST00000544429 PHC1P78364 1004 aa17.61■□□□□ 0.41
DDX55-211ENST00000544429 PMP22Q01453 160 aa17.61■□□□□ 0.41
DDX55-211ENST00000544429 LSM12Q3MHD2 195 aaKnown RBP17.61■□□□□ 0.41
DDX55-211ENST00000544429 HSP90B2PQ58FF3 399 aa17.61■□□□□ 0.41
DDX55-211ENST00000544429 FAM180AQ6UWF9 173 aa17.61■□□□□ 0.41
DDX55-211ENST00000544429 FAM47EQ6ZV65 393 aa17.61■□□□□ 0.41
DDX55-211ENST00000544429 ZGRF1Q86YA3 2104 aa17.61■□□□□ 0.41
DDX55-211ENST00000544429 SULF2Q8IWU5 870 aa17.61■□□□□ 0.41
DDX55-211ENST00000544429 ARFGAP2Q8N6H7 521 aa17.61■□□□□ 0.41
DDX55-211ENST00000544429 BCORP1Q8N888 145 aa17.61■□□□□ 0.41
DDX55-211ENST00000544429 ZFP62Q8NB50 900 aaPredicted RBP17.61■□□□□ 0.41
DDX55-211ENST00000544429 GALNT11Q8NCW6 608 aa17.61■□□□□ 0.41
DDX55-211ENST00000544429 OR5P2Q8WZ92 322 aa17.61■□□□□ 0.41
DDX55-211ENST00000544429 GIMAP5Q96F15 307 aa17.61■□□□□ 0.41
DDX55-211ENST00000544429 DUSP26Q9BV47 211 aa17.61■□□□□ 0.41
DDX55-211ENST00000544429 DPY30Q9C005 99 aa17.61■□□□□ 0.41
DDX55-211ENST00000544429 PROK2Q9HC23 129 aa17.61■□□□□ 0.41
DDX55-211ENST00000544429 AGPAT4Q9NRZ5 378 aa17.61■□□□□ 0.41
DDX55-211ENST00000544429 DDX18Q9NVP1 670 aaKnown RBP17.61■□□□□ 0.41
DDX55-211ENST00000544429 NINQ8N4C6 2090 aa17.6■□□□□ 0.41
DDX55-211ENST00000544429 A0A1W2PRB8 838 aa17.6■□□□□ 0.41
DDX55-211ENST00000544429 ERN1O75460 977 aaKnown RBP17.6■□□□□ 0.41
DDX55-211ENST00000544429 EFNA1P20827 205 aaPredicted RBP17.6■□□□□ 0.41
DDX55-211ENST00000544429 IL12AP29459 219 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms