RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 C6orf52Q5T4I8 152 aa8.73□□□□□ -1.01
GNE-206ENST00000543356 CDC73Q6P1J9 531 aa8.73□□□□□ -1.01
GNE-206ENST00000543356 SHQ1Q6PI26 577 aaKnown RBP8.73□□□□□ -1.01
GNE-206ENST00000543356 MED25Q71SY5 747 aa8.73□□□□□ -1.01
GNE-206ENST00000543356 HIPK1Q86Z02 1210 aa8.73□□□□□ -1.01
GNE-206ENST00000543356 C16orf58Q96GQ5 468 aa8.73□□□□□ -1.01
GNE-206ENST00000543356 BTBD2Q9BX70 525 aa8.73□□□□□ -1.01
GNE-206ENST00000543356 CUTCQ9NTM9 273 aa8.73□□□□□ -1.01
GNE-206ENST00000543356 SMPD3Q9NY59 655 aaPredicted RBP8.73□□□□□ -1.01
GNE-206ENST00000543356 IFT80Q9P2H3 777 aaPredicted RBP8.73□□□□□ -1.01
GNE-206ENST00000543356 RAB23Q9ULC3 237 aa8.73□□□□□ -1.01
GNE-206ENST00000543356 LIPT1Q9Y234 373 aa8.73□□□□□ -1.01
GNE-206ENST00000543356 GPC6Q9Y625 555 aaPredicted RBP8.73□□□□□ -1.01
GNE-206ENST00000543356 NUP210LQ5VU65 1888 aa8.73□□□□□ -1.01
GNE-206ENST00000543356 DUXAA6NLW8 204 aa8.73□□□□□ -1.01
GNE-206ENST00000543356 CTNSO60931 367 aa8.73□□□□□ -1.01
GNE-206ENST00000543356 MFN2O95140 757 aa8.73□□□□□ -1.01
GNE-206ENST00000543356 CPNE6O95741 557 aa8.73□□□□□ -1.01
GNE-206ENST00000543356 NR2F1P10589 423 aa8.73□□□□□ -1.01
GNE-206ENST00000543356 DCTP40126 519 aa8.73□□□□□ -1.01
GNE-206ENST00000543356 ID2Q02363 134 aa8.73□□□□□ -1.01
GNE-206ENST00000543356 MGAT2Q10469 447 aa8.73□□□□□ -1.01
GNE-206ENST00000543356 PDK3Q15120 406 aa8.73□□□□□ -1.01
GNE-206ENST00000543356 SYPL1Q16563 259 aa8.73□□□□□ -1.01
GNE-206ENST00000543356 PRICKLE4Q2TBC4 344 aa8.73□□□□□ -1.01
GNE-206ENST00000543356 PROX2Q3B8N5 592 aa8.73□□□□□ -1.01
GNE-206ENST00000543356 SNAP47Q5SQN1 464 aa8.73□□□□□ -1.01
GNE-206ENST00000543356 TBPL2Q6SJ96 375 aa8.73□□□□□ -1.01
GNE-206ENST00000543356 KRT73Q86Y46 540 aa8.73□□□□□ -1.01
GNE-206ENST00000543356 CHERPQ8IWX8 916 aaKnown RBP8.73□□□□□ -1.01
GNE-206ENST00000543356 SHISA5Q8N114 240 aa8.73□□□□□ -1.01
GNE-206ENST00000543356 EID2Q8N6I1 236 aa8.73□□□□□ -1.01
GNE-206ENST00000543356 OR4D9Q8NGE8 314 aa8.73□□□□□ -1.01
GNE-206ENST00000543356 OR1L3Q8NH93 324 aa8.73□□□□□ -1.01
GNE-206ENST00000543356 FNDC8Q8TC99 324 aa8.73□□□□□ -1.01
GNE-206ENST00000543356 XAGE5Q8WWM1 108 aa8.73□□□□□ -1.01
GNE-206ENST00000543356 COL26A1Q96A83 441 aa8.73□□□□□ -1.01
GNE-206ENST00000543356 MMABQ96EY8 250 aaPredicted RBP8.73□□□□□ -1.01
GNE-206ENST00000543356 NRBF2Q96F24 287 aa8.73□□□□□ -1.01
GNE-206ENST00000543356 PEX11GQ96HA9 241 aa8.73□□□□□ -1.01
GNE-206ENST00000543356 LOXL4Q96JB6 756 aa8.73□□□□□ -1.01
GNE-206ENST00000543356 RDH12Q96NR8 316 aa8.73□□□□□ -1.01
GNE-206ENST00000543356 ZNF347Q96SE7 839 aa8.73□□□□□ -1.01
GNE-206ENST00000543356 TREX2Q9BQ50 279 aaPredicted RBP8.73□□□□□ -1.01
GNE-206ENST00000543356 FANCEQ9HB96 536 aa8.73□□□□□ -1.01
GNE-206ENST00000543356 TBCCD1Q9NVR7 557 aa8.73□□□□□ -1.01
GNE-206ENST00000543356 GIN1Q9NXP7 522 aa8.73□□□□□ -1.01
GNE-206ENST00000543356 VNN3Q9NY84 501 aa8.73□□□□□ -1.01
GNE-206ENST00000543356 MAT2BQ9NZL9 334 aa8.73□□□□□ -1.01
GNE-206ENST00000543356 CALML5Q9NZT1 146 aa8.73□□□□□ -1.01
GNE-206ENST00000543356 A0A0G2JPF8 293 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 CPED1A4D0V7 1026 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 HNRNPCL2B2RXH8 293 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 HNRNPCL3B7ZW38 293 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 ALPLP05186 524 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 HNRNPCL4P0DMR1 293 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 CKMT1AP12532 417 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 FOLR1P15328 257 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 ITGA2P17301 1181 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 NT5EP21589 574 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 AVPR2P30518 371 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 DNAJA1P31689 397 aaKnown RBP8.72□□□□□ -1.01
GNE-206ENST00000543356 HSD17B7P56937 341 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 PPP2R2BQ00005 443 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 INAQ16352 499 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 HEPHL1Q6MZM0 1159 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 ZCCHC12Q6PEW1 402 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 CARM1Q86X55 608 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 SLC44A2Q8IWA5 706 aaPredicted RBP8.72□□□□□ -1.01
GNE-206ENST00000543356 SPPL2AQ8TCT8 520 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 MAGEE2Q8TD90 523 aaPredicted RBP8.72□□□□□ -1.01
GNE-206ENST00000543356 APOBEC4Q8WW27 367 aaKnown RBP8.72□□□□□ -1.01
GNE-206ENST00000543356 TFAP2CQ92754 450 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 CTHRC1Q96CG8 243 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 ZNF501Q96CX3 271 aaPredicted RBP8.72□□□□□ -1.01
GNE-206ENST00000543356 TRNT1Q96Q11 434 aaKnown RBP8.72□□□□□ -1.01
GNE-206ENST00000543356 EPYCQ99645 322 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 RBM4BQ9BQ04 359 aaKnown RBP8.72□□□□□ -1.01
GNE-206ENST00000543356 YIPF4Q9BSR8 244 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 SPATA5L1Q9BVQ7 753 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 RBM4Q9BWF3 364 aaKnown RBP8.72□□□□□ -1.01
GNE-206ENST00000543356 ANKRD60Q9BZ19 345 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 LRRN3Q9H3W5 708 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 RUBCNLQ9H714 662 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 PRTFDC1Q9NRG1 225 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 DSPPQ9NZW4 1301 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 A0A1W2PQM1 296 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 CLDN4O14493 209 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 ZNF749O43361 778 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 RPLP0P05388 317 aaKnown RBP8.72□□□□□ -1.01
GNE-206ENST00000543356 CHRM4P08173 479 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 FPR1P21462 350 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 KCNJ5P48544 419 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 IST1P53990 364 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 CCL7P80098 99 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 MAT1AQ00266 395 aaKnown RBP8.72□□□□□ -1.01
GNE-206ENST00000543356 KCNC4Q03721 635 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 MAP4K2Q12851 820 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 BIKQ13323 160 aa8.72□□□□□ -1.01
GNE-206ENST00000543356 GK3PQ14409 553 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms