RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, human

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GCFC2-211	ENST00000541687	OR9A2	Q8NGT5	310 aa		13.73	□□□□□ -0.21
GCFC2-211	ENST00000541687	TSACC	Q96A04	125 aa	Predicted RBP	13.73	□□□□□ -0.21
GCFC2-211	ENST00000541687	BTBD1	Q9H0C5	482 aa		13.73	□□□□□ -0.21
GCFC2-211	ENST00000541687	TEX10	Q9NXF1	929 aa	Predicted RBP	13.73	□□□□□ -0.21
GCFC2-211	ENST00000541687	BAIAP2	Q9UQB8	552 aa		13.73	□□□□□ -0.21
GCFC2-211	ENST00000541687	PCDHGA3	Q9Y5H0	932 aa		13.73	□□□□□ -0.21
GCFC2-211	ENST00000541687	FAM183A	A6NL82	134 aa		13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	PROM1	O43490	865 aa		13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	AHCY	P23526	432 aa		13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	BMP8B	P34820	402 aa		13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	BMPR1A	P36894	532 aa		13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	EIPR1	Q53HC9	387 aa		13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	MEDAG	Q5VYS4	303 aa		13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	FCRLB	Q6BAA4	426 aa		13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	LINGO2	Q7L985	606 aa		13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	BMP8A	Q7Z5Y6	402 aa		13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	BTLA	Q7Z6A9	289 aa		13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	JAZF1	Q86VZ6	243 aa		13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	RBM45	Q8IUH3	476 aa	Known RBP	13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687		Q8N402	240 aa		13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	SAMD12	Q8N8I0	201 aa		13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	GATS	Q8NAP1	163 aa		13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	TM9SF2	Q99805	663 aa		13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	MYNN	Q9NPC7	610 aa		13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	PAQR5	Q9NXK6	330 aa	Predicted RBP	13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	EXTL2	Q9UBQ6	330 aa		13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	STUB1	Q9UNE7	303 aa		13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687		A0A1B0GVT2	93 aa		13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687		B4DGG1	531 aa		13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	FURIN	P09958	794 aa		13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	GNS	P15586	552 aa		13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	DSG2	Q14126	1118 aa		13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	TBCE	Q15813	527 aa	Predicted RBP	13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	CST6	Q15828	149 aa		13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	GALNTL5	Q7Z4T8	443 aa		13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	RBM12B	Q8IXT5	1001 aa	Known RBP	13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	CHST4	Q8NCG5	386 aa		13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	SUN3	Q8TAQ9	357 aa		13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	HRASLS5	Q96KN8	279 aa		13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	TREX2	Q9BQ50	279 aa	Predicted RBP	13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	EIF3K	Q9UBQ5	218 aa	Known RBP	13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	IGFBP1	P08833	259 aa	Predicted RBP	13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	ZNF385B	Q569K4	471 aa		13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	C6orf132	Q5T0Z8	1188 aa		13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	PODNL1	Q6PEZ8	512 aa		13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	SAMD14	Q8IZD0	417 aa	Predicted RBP	13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	GNPDA2	Q8TDQ7	276 aa		13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	OSTF1	Q92882	214 aa		13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	SLC22A18	Q96BI1	424 aa		13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	BRD7	Q9NPI1	651 aa		13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	NLGN3	Q9NZ94	848 aa		13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	HSFX1	Q9UBD0	423 aa		13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	WDR37	Q9Y2I8	494 aa		13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	MED31	Q9Y3C7	131 aa		13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	HSPB11	Q9Y547	144 aa		13.72	□□□□□ -0.21
GCFC2-211	ENST00000541687	NIN	Q8N4C6	2090 aa		13.71	□□□□□ -0.21
GCFC2-211	ENST00000541687	NPIPA5	A0A0B4J1W7	369 aa		13.71	□□□□□ -0.21
GCFC2-211	ENST00000541687	NPIPA7	E9PJI5	369 aa		13.71	□□□□□ -0.21
GCFC2-211	ENST00000541687	CLDN4	O14493	209 aa		13.71	□□□□□ -0.21
GCFC2-211	ENST00000541687	ANKRD28	O15084	1053 aa		13.71	□□□□□ -0.21
GCFC2-211	ENST00000541687	EMC8	O43402	210 aa		13.71	□□□□□ -0.21
GCFC2-211	ENST00000541687	CPNE6	O95741	557 aa		13.71	□□□□□ -0.21
GCFC2-211	ENST00000541687	NPIPA8	P0DM63	369 aa		13.71	□□□□□ -0.21
GCFC2-211	ENST00000541687	JUNB	P17275	347 aa	Predicted RBP	13.71	□□□□□ -0.21
GCFC2-211	ENST00000541687	SCRN3	Q0VDG4	424 aa		13.71	□□□□□ -0.21
GCFC2-211	ENST00000541687	C1orf61	Q13536	156 aa		13.71	□□□□□ -0.21
GCFC2-211	ENST00000541687	PNCK	Q6P2M8	343 aa		13.71	□□□□□ -0.21
GCFC2-211	ENST00000541687	PLBD1	Q6P4A8	553 aa		13.71	□□□□□ -0.21
GCFC2-211	ENST00000541687	UNC5D	Q6UXZ4	953 aa		13.71	□□□□□ -0.21
GCFC2-211	ENST00000541687	CYB561A3	Q8NBI2	242 aa		13.71	□□□□□ -0.21
GCFC2-211	ENST00000541687	SMARCD2	Q92925	531 aa		13.71	□□□□□ -0.21
GCFC2-211	ENST00000541687	NLK	Q9UBE8	527 aa		13.71	□□□□□ -0.21
GCFC2-211	ENST00000541687	PSORS1C1	Q9UIG5	152 aa		13.71	□□□□□ -0.21
GCFC2-211	ENST00000541687	MSRA	Q9UJ68	235 aa		13.71	□□□□□ -0.21
GCFC2-211	ENST00000541687	PCDHGA6	Q9Y5G7	932 aa		13.71	□□□□□ -0.21
GCFC2-211	ENST00000541687	SH3D21	A4FU49	640 aa		13.71	□□□□□ -0.21
GCFC2-211	ENST00000541687	KDM4B	O94953	1096 aa		13.71	□□□□□ -0.21
GCFC2-211	ENST00000541687	SLCO2B1	O94956	709 aa		13.71	□□□□□ -0.21
GCFC2-211	ENST00000541687	CD160	O95971	181 aa		13.71	□□□□□ -0.21
GCFC2-211	ENST00000541687	PYCR1	P32322	319 aa		13.71	□□□□□ -0.21
GCFC2-211	ENST00000541687	NAA10	P41227	235 aa	Predicted RBP	13.71	□□□□□ -0.21
GCFC2-211	ENST00000541687	CEBPG	P53567	150 aa		13.71	□□□□□ -0.21
GCFC2-211	ENST00000541687	ZNF33B	Q06732	778 aa		13.71	□□□□□ -0.21
GCFC2-211	ENST00000541687	ZC3H14	Q6PJT7	736 aa	Known RBP	13.71	□□□□□ -0.21
GCFC2-211	ENST00000541687	LINC00471	Q8N535	108 aa		13.71	□□□□□ -0.21
GCFC2-211	ENST00000541687	MRPL43	Q8N983	215 aa	Known RBP	13.71	□□□□□ -0.21
GCFC2-211	ENST00000541687	ZNF248	Q8NDW4	579 aa		13.71	□□□□□ -0.21
GCFC2-211	ENST00000541687	OR2T33	Q8NG76	320 aa		13.71	□□□□□ -0.21
GCFC2-211	ENST00000541687	NDC1	Q9BTX1	674 aa		13.71	□□□□□ -0.21
GCFC2-211	ENST00000541687	POU2F3	Q9UKI9	436 aa		13.71	□□□□□ -0.21
GCFC2-211	ENST00000541687	RBM7	Q9Y580	266 aa	Known RBP	13.71	□□□□□ -0.21
GCFC2-211	ENST00000541687	HEBP2	Q9Y5Z4	205 aa		13.71	□□□□□ -0.21
GCFC2-211	ENST00000541687	TRIM64C	A6NLI5	447 aa		13.71	□□□□□ -0.22
GCFC2-211	ENST00000541687	ARHGAP33	O14559	1287 aa		13.71	□□□□□ -0.22
GCFC2-211	ENST00000541687	ARAF	P10398	606 aa		13.71	□□□□□ -0.22
GCFC2-211	ENST00000541687	ACSL1	P33121	698 aa		13.71	□□□□□ -0.22
GCFC2-211	ENST00000541687	GABRA3	P34903	492 aa		13.71	□□□□□ -0.22
GCFC2-211	ENST00000541687	ZNF91	Q05481	1191 aa		13.71	□□□□□ -0.22
GCFC2-211	ENST00000541687	ZNF750	Q32MQ0	723 aa		13.71	□□□□□ -0.22
GCFC2-211	ENST00000541687	STEAP3	Q658P3	488 aa		13.71	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms