RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 PGRP06401 933 aa17.37■□□□□ 0.37
VPS33A-205ENST00000541169 KRT16P08779 473 aa17.37■□□□□ 0.37
VPS33A-205ENST00000541169 MC3RP41968 323 aa17.37■□□□□ 0.37
VPS33A-205ENST00000541169 RPP38P78345 283 aaKnown RBP17.37■□□□□ 0.37
VPS33A-205ENST00000541169 EXOSC7Q15024 291 aaKnown RBP17.37■□□□□ 0.37
VPS33A-205ENST00000541169 OR1C1Q15619 314 aa17.37■□□□□ 0.37
VPS33A-205ENST00000541169 FAM174BQ3ZCQ3 159 aa17.37■□□□□ 0.37
VPS33A-205ENST00000541169 RTL4Q6ZR62 310 aa17.37■□□□□ 0.37
VPS33A-205ENST00000541169 TRIML2Q8N7C3 387 aa17.37■□□□□ 0.37
VPS33A-205ENST00000541169 FAM98AQ8NCA5 519 aaKnown RBP17.37■□□□□ 0.37
VPS33A-205ENST00000541169 MDS2Q8NDY4 140 aa17.37■□□□□ 0.37
VPS33A-205ENST00000541169 OR56A1Q8NGH5 318 aa17.37■□□□□ 0.37
VPS33A-205ENST00000541169 SFXN5Q8TD22 340 aa17.37■□□□□ 0.37
VPS33A-205ENST00000541169 MS4A4EQ96PG1 132 aa17.37■□□□□ 0.37
VPS33A-205ENST00000541169 ZNF317Q96PQ6 595 aaPredicted RBP17.37■□□□□ 0.37
VPS33A-205ENST00000541169 EBF4Q9BQW3 602 aa17.37■□□□□ 0.37
VPS33A-205ENST00000541169 RMND5AQ9H871 391 aa17.37■□□□□ 0.37
VPS33A-205ENST00000541169 TIMMDC1Q9NPL8 285 aa17.37■□□□□ 0.37
VPS33A-205ENST00000541169 KLHL14Q9P2G3 628 aa17.37■□□□□ 0.37
VPS33A-205ENST00000541169 BTNL2Q9UIR0 455 aa17.37■□□□□ 0.37
VPS33A-205ENST00000541169 DCTN4Q9UJW0 460 aa17.37■□□□□ 0.37
VPS33A-205ENST00000541169 MRTO4Q9UKD2 239 aaKnown RBP17.37■□□□□ 0.37
VPS33A-205ENST00000541169 GPR55Q9Y2T6 319 aaPredicted RBP17.37■□□□□ 0.37
VPS33A-205ENST00000541169 FAM234BA2RU67 622 aa17.36■□□□□ 0.37
VPS33A-205ENST00000541169 CFLARO15519 480 aa17.36■□□□□ 0.37
VPS33A-205ENST00000541169 ABCB7O75027 752 aa17.36■□□□□ 0.37
VPS33A-205ENST00000541169 ERN1O75460 977 aaKnown RBP17.36■□□□□ 0.37
VPS33A-205ENST00000541169 SOX18P35713 384 aa17.36■□□□□ 0.37
VPS33A-205ENST00000541169 UFM1P61960 85 aa17.36■□□□□ 0.37
VPS33A-205ENST00000541169 MRPS22P82650 360 aaKnown RBP17.36■□□□□ 0.37
VPS33A-205ENST00000541169 C19orf57Q0VDD7 668 aa17.36■□□□□ 0.37
VPS33A-205ENST00000541169 SQLEQ14534 574 aa17.36■□□□□ 0.37
VPS33A-205ENST00000541169 CYP27C1Q4G0S4 372 aa17.36■□□□□ 0.37
VPS33A-205ENST00000541169 CYP4Z2PQ8N1L4 340 aa17.36■□□□□ 0.37
VPS33A-205ENST00000541169 CDRT4Q8N9R6 151 aa17.36■□□□□ 0.37
VPS33A-205ENST00000541169 SPACA9Q96E40 222 aaPredicted RBP17.36■□□□□ 0.37
VPS33A-205ENST00000541169 VSTM2LQ96N03 204 aa17.36■□□□□ 0.37
VPS33A-205ENST00000541169 OR52E6Q96RD3 313 aa17.36■□□□□ 0.37
VPS33A-205ENST00000541169 SECISBP2Q96T21 854 aaKnown RBP17.36■□□□□ 0.37
VPS33A-205ENST00000541169 NSRP1Q9H0G5 558 aaKnown RBP17.36■□□□□ 0.37
VPS33A-205ENST00000541169 GIN1Q9NXP7 522 aa17.36■□□□□ 0.37
VPS33A-205ENST00000541169 PLA2G3Q9NZ20 509 aa17.36■□□□□ 0.37
VPS33A-205ENST00000541169 KLF13Q9Y2Y9 288 aaPredicted RBP17.36■□□□□ 0.37
VPS33A-205ENST00000541169 KLRC4-KLRK1H3BQV0 150 aa17.35■□□□□ 0.37
VPS33A-205ENST00000541169 TP53I11O14683 189 aa17.35■□□□□ 0.37
VPS33A-205ENST00000541169 SLC25A12O75746 678 aa17.35■□□□□ 0.37
VPS33A-205ENST00000541169 FBXO45P0C2W1 286 aa17.35■□□□□ 0.37
VPS33A-205ENST00000541169 CCT3P49368 545 aaKnown RBP17.35■□□□□ 0.37
VPS33A-205ENST00000541169 PRIM2P49643 509 aa17.35■□□□□ 0.37
VPS33A-205ENST00000541169 NR0B1P51843 470 aaKnown RBP17.35■□□□□ 0.37
VPS33A-205ENST00000541169 POLR2JP52435 117 aaKnown RBP17.35■□□□□ 0.37
VPS33A-205ENST00000541169 ARFIP2P53365 341 aa17.35■□□□□ 0.37
VPS33A-205ENST00000541169 TXNL4AP83876 142 aaKnown RBP17.35■□□□□ 0.37
VPS33A-205ENST00000541169 SPANXN4Q5MJ08 99 aa17.35■□□□□ 0.37
VPS33A-205ENST00000541169 TMEM198Q66K66 360 aa17.35■□□□□ 0.37
VPS33A-205ENST00000541169 OR4F3Q6IEY1 312 aa17.35■□□□□ 0.37
VPS33A-205ENST00000541169 SCMH1Q96GD3 660 aa17.35■□□□□ 0.37
VPS33A-205ENST00000541169 CCDC115Q96NT0 180 aa17.35■□□□□ 0.37
VPS33A-205ENST00000541169 FOLH1BQ9HBA9 442 aa17.35■□□□□ 0.37
VPS33A-205ENST00000541169 Q9N2J8 555 aa17.35■□□□□ 0.37
VPS33A-205ENST00000541169 CNIH4Q9P003 139 aa17.35■□□□□ 0.37
VPS33A-205ENST00000541169 PCDHGB3Q9Y5G1 929 aa17.35■□□□□ 0.37
VPS33A-205ENST00000541169 NPFFR2Q9Y5X5 522 aa17.35■□□□□ 0.37
VPS33A-205ENST00000541169 COL6A6A6NMZ7 2263 aa17.35■□□□□ 0.37
VPS33A-205ENST00000541169 TLN1Q9Y490 2541 aaKnown RBP17.35■□□□□ 0.37
VPS33A-205ENST00000541169 CHD6Q8TD26 2715 aa17.34■□□□□ 0.37
VPS33A-205ENST00000541169 SUV39H1O43463 412 aa17.34■□□□□ 0.37
VPS33A-205ENST00000541169 MAN1A2O60476 641 aa17.34■□□□□ 0.37
VPS33A-205ENST00000541169 NEURL1O76050 574 aa17.34■□□□□ 0.37
VPS33A-205ENST00000541169 SORBS2O94875 1100 aaKnown RBP17.34■□□□□ 0.37
VPS33A-205ENST00000541169 SP1P08047 785 aa17.34■□□□□ 0.37
VPS33A-205ENST00000541169 KRT20P35900 424 aa17.34■□□□□ 0.37
VPS33A-205ENST00000541169 SOX3P41225 446 aa17.34■□□□□ 0.37
VPS33A-205ENST00000541169 MAGEA8P43361 318 aa17.34■□□□□ 0.37
VPS33A-205ENST00000541169 CD97P48960 835 aa17.34■□□□□ 0.37
VPS33A-205ENST00000541169 PSMD4P55036 377 aaKnown RBP17.34■□□□□ 0.37
VPS33A-205ENST00000541169 MAPKAPK3Q16644 382 aa17.34■□□□□ 0.37
VPS33A-205ENST00000541169 ZNF791Q3KP31 576 aaPredicted RBP17.34■□□□□ 0.37
VPS33A-205ENST00000541169 PLEKHN1Q494U1 663 aaPredicted RBP17.34■□□□□ 0.37
VPS33A-205ENST00000541169 SPDYE7PQ495Y7 208 aa17.34■□□□□ 0.37
VPS33A-205ENST00000541169 NADK2Q4G0N4 442 aa17.34■□□□□ 0.37
VPS33A-205ENST00000541169 ZNF766Q5HY98 468 aa17.34■□□□□ 0.37
VPS33A-205ENST00000541169 TBCELQ5QJ74 424 aa17.34■□□□□ 0.37
VPS33A-205ENST00000541169 SLC25A25Q6KCM7 469 aa17.34■□□□□ 0.37
VPS33A-205ENST00000541169 PTRH1Q86Y79 214 aaKnown RBP17.34■□□□□ 0.37
VPS33A-205ENST00000541169 NUP43Q8NFH3 380 aa17.34■□□□□ 0.37
VPS33A-205ENST00000541169 GOT1L1Q8NHS2 421 aaPredicted RBP17.34■□□□□ 0.37
VPS33A-205ENST00000541169 RFWD2Q8NHY2 731 aa17.34■□□□□ 0.37
VPS33A-205ENST00000541169 DOK4Q8TEW6 326 aa17.34■□□□□ 0.37
VPS33A-205ENST00000541169 TSPEARQ8WU66 669 aa17.34■□□□□ 0.37
VPS33A-205ENST00000541169 HOXB13Q92826 284 aaPredicted RBP17.34■□□□□ 0.37
VPS33A-205ENST00000541169 LMF2Q9BU23 707 aaKnown RBP17.34■□□□□ 0.37
VPS33A-205ENST00000541169 TMEM120AQ9BXJ8 343 aa17.34■□□□□ 0.37
VPS33A-205ENST00000541169 ITPAQ9BY32 194 aa17.34■□□□□ 0.37
VPS33A-205ENST00000541169 ZCCHC3Q9NUD5 404 aaKnown RBP17.34■□□□□ 0.37
VPS33A-205ENST00000541169 PCDHGA10Q9Y5H3 936 aa17.34■□□□□ 0.37
VPS33A-205ENST00000541169 SNX8Q9Y5X2 465 aa17.34■□□□□ 0.37
VPS33A-205ENST00000541169 NME2P1O60361 137 aa17.33■□□□□ 0.36
VPS33A-205ENST00000541169 SCN2BO60939 215 aa17.33■□□□□ 0.36
VPS33A-205ENST00000541169 NADKO95544 446 aaPredicted RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms