RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 ATRAIDQ6UW56 229 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 C17orf107Q6ZR85 190 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 PTCHD4Q6ZW05 846 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 SYNPOQ8N3V7 929 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 STPG2Q8N412 459 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 CELF5Q8N6W0 485 aaKnown RBP4.97□□□□□ -1.61
PROM1-220ENST00000540805 OR52J3Q8NH60 311 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 LHFPL5Q8TAF8 219 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 ADAMTS15Q8TE58 950 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 UBTD2Q8WUN7 234 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 RLN3Q8WXF3 142 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 RNFT2Q96EX2 444 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 SMIM14Q96QK8 99 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 NIPSNAP1Q9BPW8 284 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 AIF1LQ9BQI0 150 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 MGME1Q9BQP7 344 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 DOHHQ9BU89 302 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 GPR174Q9BXC1 333 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 RACGAP1Q9H0H5 632 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 P2RY12Q9H244 342 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 RLIMQ9NVW2 624 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 EIF3KQ9UBQ5 218 aaKnown RBP4.97□□□□□ -1.61
PROM1-220ENST00000540805 SLC6A14Q9UN76 642 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 TRIOO75962 3097 aa4.96□□□□□ -1.61
PROM1-220ENST00000540805 A0A0D9SEW6 157 aa4.96□□□□□ -1.61
PROM1-220ENST00000540805 A0A1W2PP55 124 aa4.96□□□□□ -1.61
PROM1-220ENST00000540805 RAB19A4D1S5 217 aa4.96□□□□□ -1.61
PROM1-220ENST00000540805 QSOX1O00391 747 aa4.96□□□□□ -1.61
PROM1-220ENST00000540805 BTN3A3O00478 584 aa4.96□□□□□ -1.61
PROM1-220ENST00000540805 NRG2O14511 850 aaPredicted RBP4.96□□□□□ -1.61
PROM1-220ENST00000540805 SLC28A2O43868 658 aa4.96□□□□□ -1.61
PROM1-220ENST00000540805 SDC3O75056 442 aa4.96□□□□□ -1.61
PROM1-220ENST00000540805 CDRT1O95170 752 aa4.96□□□□□ -1.61
PROM1-220ENST00000540805 CFDP00746 253 aaPredicted RBP4.96□□□□□ -1.61
PROM1-220ENST00000540805 CXCL10P02778 98 aa4.96□□□□□ -1.61
PROM1-220ENST00000540805 SOD2P04179 222 aa4.96□□□□□ -1.61
PROM1-220ENST00000540805 CYP17A1P05093 508 aa4.96□□□□□ -1.61
PROM1-220ENST00000540805 ADRA2AP08913 450 aa4.96□□□□□ -1.61
PROM1-220ENST00000540805 ALPPL2P10696 532 aa4.96□□□□□ -1.61
PROM1-220ENST00000540805 PCSK2P16519 638 aa4.96□□□□□ -1.61
PROM1-220ENST00000540805 ZNF30P17039 623 aa4.96□□□□□ -1.61
PROM1-220ENST00000540805 BTF3P20290 206 aaKnown RBP4.96□□□□□ -1.61
PROM1-220ENST00000540805 PSMA3P25788 255 aa4.96□□□□□ -1.61
PROM1-220ENST00000540805 MAB21L1Q13394 359 aa4.96□□□□□ -1.61
PROM1-220ENST00000540805 FGL2Q14314 439 aa4.96□□□□□ -1.61
PROM1-220ENST00000540805 EXOC3L2Q2M3D2 409 aa4.96□□□□□ -1.61
PROM1-220ENST00000540805 TUSC1Q2TAM9 212 aa4.96□□□□□ -1.61
PROM1-220ENST00000540805 ITPRIPL2Q3MIP1 535 aa4.96□□□□□ -1.61
PROM1-220ENST00000540805 PRRT3Q5FWE3 981 aa4.96□□□□□ -1.61
PROM1-220ENST00000540805 TMEM164Q5U3C3 297 aa4.96□□□□□ -1.61
PROM1-220ENST00000540805 TRIQKQ629K1 86 aa4.96□□□□□ -1.61
PROM1-220ENST00000540805 MZT2BQ6NZ67 158 aa4.96□□□□□ -1.61
PROM1-220ENST00000540805 CASP12Q6UXS9 341 aa4.96□□□□□ -1.61
PROM1-220ENST00000540805 C19orf18Q8NEA5 215 aa4.96□□□□□ -1.61
PROM1-220ENST00000540805 OR4E2Q8NGC2 313 aa4.96□□□□□ -1.61
PROM1-220ENST00000540805 OR8K3Q8NH51 312 aa4.96□□□□□ -1.61
PROM1-220ENST00000540805 LMX1AQ8TE12 382 aa4.96□□□□□ -1.61
PROM1-220ENST00000540805 MARVELD3Q96A59 401 aa4.96□□□□□ -1.61
PROM1-220ENST00000540805 KIAA1143Q96AT1 154 aaPredicted RBP4.96□□□□□ -1.61
PROM1-220ENST00000540805 PPCDCQ96CD2 204 aa4.96□□□□□ -1.61
PROM1-220ENST00000540805 CMTM7Q96FZ5 175 aa4.96□□□□□ -1.61
PROM1-220ENST00000540805 SHDQ96IW2 340 aa4.96□□□□□ -1.61
PROM1-220ENST00000540805 SPATA9Q9BWV2 254 aa4.96□□□□□ -1.61
PROM1-220ENST00000540805 EBPLQ9BY08 206 aa4.96□□□□□ -1.61
PROM1-220ENST00000540805 LMAN2LQ9H0V9 348 aa4.96□□□□□ -1.61
PROM1-220ENST00000540805 PDFQ9HBH1 243 aa4.96□□□□□ -1.61
PROM1-220ENST00000540805 GALNT9Q9HCQ5 603 aa4.96□□□□□ -1.61
PROM1-220ENST00000540805 TMEM184CQ9NVA4 438 aa4.96□□□□□ -1.61
PROM1-220ENST00000540805 KCTD5Q9NXV2 234 aa4.96□□□□□ -1.61
PROM1-220ENST00000540805 RPH3AQ9Y2J0 694 aaPredicted RBP4.96□□□□□ -1.61
PROM1-220ENST00000540805 HELZP42694 1942 aaKnown RBP4.96□□□□□ -1.62
PROM1-220ENST00000540805 DMDP11532 3685 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 TCRBV16S1A1N1A0A5B0 115 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 HYKKA2RU49 373 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 OR2W5A6NFC9 320 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 HEPACAM2A8MVW5 462 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 LAMTOR5O43504 91 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 POP7O75817 140 aaKnown RBP4.96□□□□□ -1.62
PROM1-220ENST00000540805 PIPP12273 146 aaPredicted RBP4.96□□□□□ -1.62
PROM1-220ENST00000540805 EPCAMP16422 314 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 ATF6P18850 670 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 CSTF2P33240 577 aaKnown RBP eCLIP4.96□□□□□ -1.62
PROM1-220ENST00000540805 RAB8AP61006 207 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 AP1S1P61966 158 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 HNRNPA0Q13151 305 aaKnown RBP4.96□□□□□ -1.62
PROM1-220ENST00000540805 LRRC32Q14392 662 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 MICAQ29983 383 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 KLHL12Q53G59 568 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 BRAT1Q6PJG6 821 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 DEF8Q6ZN54 512 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 RASGRP3Q8IV61 690 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 OR9Q2Q8NGE9 314 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 OR5M3Q8NGP4 307 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 MAPKAP1Q9BPZ7 522 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 ARHGAP9Q9BRR9 750 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 BCL2L14Q9BZR8 327 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 MIXL1Q9H2W2 232 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 TPT1P8Q9HAU6 139 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 STOML2Q9UJZ1 356 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 SCML2Q9UQR0 700 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms