RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 ERGP11308 486 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 DDX6P26196 483 aaKnown RBP eCLIP11.59□□□□□ -0.559e-6■□□□□ 10.1
NPC1-202ENST00000540608 SSTR4P31391 388 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 MTNR1AP48039 350 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 CCR8P51685 355 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 ERVFC1P60507 584 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 HOXC5Q00444 222 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 CD83Q01151 205 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 MINDY4Q4G0A6 757 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 METAP1DQ6UB28 335 aaPredicted RBP11.59□□□□□ -0.55
NPC1-202ENST00000540608 C11orf96Q7Z7L8 435 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 NUDT13Q86X67 352 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 LIX1LQ8IVB5 337 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 DCUN1D3Q8IWE4 304 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 TRIM48Q8IWZ4 208 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 TCTE3Q8IZS6 198 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 SYT14Q8NB59 555 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 GRPEL2Q8TAA5 225 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 BBS10Q8TAM1 723 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 SLC9A6Q92581 669 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 UCN3Q969E3 161 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 RGMAQ96B86 450 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 ZSWIM3Q96MP5 696 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 PLA2G12AQ9BZM1 189 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 SAP130Q9H0E3 1048 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 PPP1R3EQ9H7J1 279 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 KCNK12Q9HB15 430 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 TEX10Q9NXF1 929 aaPredicted RBP11.59□□□□□ -0.55
NPC1-202ENST00000540608 MARK1Q9P0L2 795 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 TRPC4Q9UBN4 977 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 C5orf42Q9H799 3197 aa11.59□□□□□ -0.55
NPC1-202ENST00000540608 KIAA1549LQ6ZVL6 1849 aa11.58□□□□□ -0.55
NPC1-202ENST00000540608 TRDV1A0A1B0GX56 115 aa11.58□□□□□ -0.56
NPC1-202ENST00000540608 LRRTM2O43300 516 aa11.58□□□□□ -0.56
NPC1-202ENST00000540608 VEGFDO43915 354 aa11.58□□□□□ -0.56
NPC1-202ENST00000540608 APOL3O95236 402 aa11.58□□□□□ -0.56
NPC1-202ENST00000540608 APEX1P27695 318 aaKnown RBP11.58□□□□□ -0.56
NPC1-202ENST00000540608 NTHL1P78549 312 aa11.58□□□□□ -0.56
NPC1-202ENST00000540608 CHRNEQ04844 493 aa11.58□□□□□ -0.56
NPC1-202ENST00000540608 DPTQ07507 201 aa11.58□□□□□ -0.56
NPC1-202ENST00000540608 ARHGAP19Q14CB8 494 aa11.58□□□□□ -0.56
NPC1-202ENST00000540608 ZNF77Q15935 545 aa11.58□□□□□ -0.56
NPC1-202ENST00000540608 SLC27A4Q6P1M0 643 aa11.58□□□□□ -0.56
NPC1-202ENST00000540608 PLET1Q6UQ28 207 aa11.58□□□□□ -0.56
NPC1-202ENST00000540608 UBE2J2Q8N2K1 259 aa11.58□□□□□ -0.56
NPC1-202ENST00000540608 C19orf18Q8NEA5 215 aa11.58□□□□□ -0.56
NPC1-202ENST00000540608 ZC3HAV1LQ96H79 300 aaKnown RBP11.58□□□□□ -0.56
NPC1-202ENST00000540608 GLIPR2Q9H4G4 154 aa11.58□□□□□ -0.56
NPC1-202ENST00000540608 NT5DC2Q9H857 520 aa11.58□□□□□ -0.56
NPC1-202ENST00000540608 WDR70Q9NW82 654 aa11.58□□□□□ -0.56
NPC1-202ENST00000540608 CUEDC1Q9NWM3 386 aaPredicted RBP11.58□□□□□ -0.56
NPC1-202ENST00000540608 TOR4AQ9NXH8 423 aa11.58□□□□□ -0.56
NPC1-202ENST00000540608 COMMD3Q9UBI1 195 aa11.58□□□□□ -0.56
NPC1-202ENST00000540608 KLHL21Q9UJP4 597 aa11.58□□□□□ -0.56
NPC1-202ENST00000540608 ADAM29Q9UKF5 820 aa11.58□□□□□ -0.56
NPC1-202ENST00000540608 PCDHGB7Q9Y5F8 929 aa11.58□□□□□ -0.56
NPC1-202ENST00000540608 FEZF1A0PJY2 475 aa11.58□□□□□ -0.56
NPC1-202ENST00000540608 SMIM30A4D0T7 59 aa11.58□□□□□ -0.56
NPC1-202ENST00000540608 PROM1O43490 865 aa11.58□□□□□ -0.56
NPC1-202ENST00000540608 RHOP08100 348 aa11.58□□□□□ -0.56
NPC1-202ENST00000540608 LIMS3P0CW19 117 aa11.58□□□□□ -0.56
NPC1-202ENST00000540608 LIMS4P0CW20 117 aa11.58□□□□□ -0.56
NPC1-202ENST00000540608 SLC2A2P11168 524 aaPredicted RBP11.58□□□□□ -0.56
NPC1-202ENST00000540608 MAN2A2P49641 1150 aa11.58□□□□□ -0.56
NPC1-202ENST00000540608 CAV3P56539 151 aa11.58□□□□□ -0.56
NPC1-202ENST00000540608 GPR19Q15760 415 aa11.58□□□□□ -0.56
NPC1-202ENST00000540608 TIGD3Q6B0B8 471 aa11.58□□□□□ -0.56
NPC1-202ENST00000540608 UBE3DQ7Z6J8 389 aa11.58□□□□□ -0.56
NPC1-202ENST00000540608 ZNF485Q8NCK3 441 aa11.58□□□□□ -0.56
NPC1-202ENST00000540608 DUSP18Q8NEJ0 188 aa11.58□□□□□ -0.56
NPC1-202ENST00000540608 ANKK1Q8NFD2 765 aa11.58□□□□□ -0.56
NPC1-202ENST00000540608 TEX47Q8TBZ9 253 aa11.58□□□□□ -0.56
NPC1-202ENST00000540608 GNPDA2Q8TDQ7 276 aa11.58□□□□□ -0.56
NPC1-202ENST00000540608 TFGQ92734 400 aaPredicted RBP11.58□□□□□ -0.56
NPC1-202ENST00000540608 ZFYVE19Q96K21 471 aa11.58□□□□□ -0.56
NPC1-202ENST00000540608 BEX2Q9BXY8 128 aa11.58□□□□□ -0.56
NPC1-202ENST00000540608 EGLN3Q9H6Z9 239 aa11.58□□□□□ -0.56
NPC1-202ENST00000540608 ACOXLQ9NUZ1 547 aa11.58□□□□□ -0.56
NPC1-202ENST00000540608 WBP1LQ9NX94 342 aa11.58□□□□□ -0.56
NPC1-202ENST00000540608 KDM4EB2RXH2 506 aaPredicted RBP11.57□□□□□ -0.56
NPC1-202ENST00000540608 H7BY64 318 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 CASKO14936 926 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 CLTBP09497 229 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 GAAP10253 952 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 PRKCAP17252 672 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 ALAS2P22557 587 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 PTBP1P26599 531 aaKnown RBP eCLIP11.57□□□□□ -0.56
NPC1-202ENST00000540608 MAP2K3P46734 347 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 EPHA5P54756 1037 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 TRA2BP62995 288 aaKnown RBP11.57□□□□□ -0.56
NPC1-202ENST00000540608 REEP5Q00765 189 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 RPA4Q13156 261 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 SNAP47Q5SQN1 464 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 MZT2BQ6NZ67 158 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 CNIH2Q6PI25 160 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 OLIG3Q7RTU3 272 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 SZRD1Q7Z422 152 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 Q8N402 240 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 TRIM63Q969Q1 353 aa11.57□□□□□ -0.56
NPC1-202ENST00000540608 AMDHD1Q96NU7 426 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms