RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 NDUFB11Q9NX14 153 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 MS4A12Q9NXJ0 267 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 ZNF226Q9NYT6 803 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 GJD2Q9UKL4 321 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 A0A0A6YYC8 382 aaPredicted RBP8.96□□□□□ -0.97
CLIP1-214ENST00000540539 FAM95CA0A1B0GW59 222 aa8.96□□□□□ -0.97
CLIP1-214ENST00000540539 ELOVL7A1L3X0 281 aa8.96□□□□□ -0.97
CLIP1-214ENST00000540539 TMEM189-UBE2V1I3L0A0 370 aa8.96□□□□□ -0.97
CLIP1-214ENST00000540539 I3L1I5 382 aaPredicted RBP8.96□□□□□ -0.97
CLIP1-214ENST00000540539 TPST2O60704 377 aa8.96□□□□□ -0.97
CLIP1-214ENST00000540539 GATBO75879 557 aaKnown RBP8.96□□□□□ -0.97
CLIP1-214ENST00000540539 SCELO95171 688 aa8.96□□□□□ -0.97
CLIP1-214ENST00000540539 C6orf47O95873 294 aa8.96□□□□□ -0.97
CLIP1-214ENST00000540539 TFP02787 698 aa8.96□□□□□ -0.97
CLIP1-214ENST00000540539 HPXP02790 462 aa8.96□□□□□ -0.97
CLIP1-214ENST00000540539 C4BPAP04003 597 aaKnown RBP8.96□□□□□ -0.97
CLIP1-214ENST00000540539 TFPIP10646 304 aa8.96□□□□□ -0.97
CLIP1-214ENST00000540539 PPP3CBP16298 524 aa8.96□□□□□ -0.97
CLIP1-214ENST00000540539 PAX6P26367 422 aa8.96□□□□□ -0.97
CLIP1-214ENST00000540539 DNAJA1P31689 397 aaKnown RBP8.96□□□□□ -0.97
CLIP1-214ENST00000540539 GKP32189 559 aa8.96□□□□□ -0.97
CLIP1-214ENST00000540539 KIR3DL2P43630 455 aa8.96□□□□□ -0.97
CLIP1-214ENST00000540539 AVPR1BP47901 424 aa8.96□□□□□ -0.97
CLIP1-214ENST00000540539 TAS2R39P59534 338 aa8.96□□□□□ -0.97
CLIP1-214ENST00000540539 TNFRSF9Q07011 255 aa8.96□□□□□ -0.97
CLIP1-214ENST00000540539 DHCR24Q15392 516 aa8.96□□□□□ -0.97
CLIP1-214ENST00000540539 USF2Q15853 346 aaPredicted RBP8.96□□□□□ -0.97
CLIP1-214ENST00000540539 CDO1Q16878 200 aa8.96□□□□□ -0.97
CLIP1-214ENST00000540539 ATP6AP1LQ52LC2 224 aa8.96□□□□□ -0.97
CLIP1-214ENST00000540539 INO80DQ53TQ3 878 aaPredicted RBP8.96□□□□□ -0.97
CLIP1-214ENST00000540539 SYPL2Q5VXT5 272 aa8.96□□□□□ -0.97
CLIP1-214ENST00000540539 GSG1LQ6UXU4 331 aa8.96□□□□□ -0.97
CLIP1-214ENST00000540539 ARMCX2Q7L311 632 aa8.96□□□□□ -0.97
CLIP1-214ENST00000540539 XYLT1Q86Y38 959 aa8.96□□□□□ -0.97
CLIP1-214ENST00000540539 CMIPQ8IY22 773 aa8.96□□□□□ -0.97
CLIP1-214ENST00000540539 ZNF687Q8N1G0 1237 aa8.96□□□□□ -0.97
CLIP1-214ENST00000540539 C7orf31Q8N865 590 aa8.96□□□□□ -0.97
CLIP1-214ENST00000540539 OR9Q1Q8NGQ5 310 aa8.96□□□□□ -0.97
CLIP1-214ENST00000540539 DNAJB8Q8NHS0 232 aa8.96□□□□□ -0.97
CLIP1-214ENST00000540539 TMEM163Q8TC26 289 aa8.96□□□□□ -0.97
CLIP1-214ENST00000540539 CAMK1GQ96NX5 476 aa8.96□□□□□ -0.97
CLIP1-214ENST00000540539 SUCNR1Q9BXA5 334 aa8.96□□□□□ -0.97
CLIP1-214ENST00000540539 OR51B6Q9H340 312 aa8.96□□□□□ -0.97
CLIP1-214ENST00000540539 ABHD16BQ9H3Z7 469 aa8.96□□□□□ -0.97
CLIP1-214ENST00000540539 SIRT7Q9NRC8 400 aa8.96□□□□□ -0.97
CLIP1-214ENST00000540539 VAPAQ9P0L0 249 aa8.96□□□□□ -0.97
CLIP1-214ENST00000540539 CHTOPQ9Y3Y2 248 aaKnown RBP8.96□□□□□ -0.97
CLIP1-214ENST00000540539 MIA3Q5JRA6 1907 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 DOCK5Q9H7D0 1870 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 ABHD14A-ACY1A0A1B0GW23 586 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 A0A1B0GW55 424 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 AZIN1O14977 448 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 OR10H2O60403 315 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 ANXA9O76027 345 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 FGF19O95750 216 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 IGF2P01344 180 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 IFNA10P01566 189 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 HOXC6P09630 235 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 DUX4L2P0CJ85 424 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 DUX4L3P0CJ86 424 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 DUX4L4P0CJ87 422 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 DUX4L5P0CJ88 424 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 DUX4L6P0CJ89 424 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 DUX4L7P0CJ90 424 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 NFYBP25208 207 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 PPM1AP35813 382 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 ANXA11P50995 505 aaKnown RBP8.96□□□□□ -0.98
CLIP1-214ENST00000540539 AKR1C2P52895 323 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 CARD18P57730 90 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 AKR1C1Q04828 323 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 PEA15Q15121 130 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 TRNP1Q6NT89 227 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 BAIAP2L2Q6UXY1 529 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 TMUB2Q71RG4 321 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 RABEPKQ7Z6M1 372 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 SYT14Q8NB59 555 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 OR8J3Q8NGG0 315 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 OR5J2Q8NH18 312 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 OR52P1PQ8NH57 321 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 CD99L2Q8TCZ2 262 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 SLC25A28Q96A46 364 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 PYURFQ96I23 114 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 SPACA7Q96KW9 195 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 OCSTAMPQ9BR26 566 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 ATG101Q9BSB4 218 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 NLNQ9BYT8 704 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 PRKD2Q9BZL6 878 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 SPRTNQ9H040 489 aaPredicted RBP8.96□□□□□ -0.98
CLIP1-214ENST00000540539 DPAGT1Q9H3H5 408 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 NXF3Q9H4D5 531 aaKnown RBP8.96□□□□□ -0.98
CLIP1-214ENST00000540539 ST6GALNAC4Q9H4F1 302 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 RERGLQ9H628 205 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 MRPS30Q9NP92 439 aaKnown RBP8.96□□□□□ -0.98
CLIP1-214ENST00000540539 ASCL3Q9NQ33 180 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 LHX9Q9NQ69 397 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 NTMQ9P121 344 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 DUX4Q9UBX2 424 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 ZMYM5Q9UJ78 669 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 POFUT2Q9Y2G5 429 aa8.96□□□□□ -0.98
CLIP1-214ENST00000540539 LSM2Q9Y333 95 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms