RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 PCK2Q16822 640 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 PRSS42Q7Z5A4 293 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 MFSD6LQ8IWD5 586 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 TCTE3Q8IZS6 198 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 OR6V1Q8N148 313 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 ZNF454Q8N9F8 522 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 OR8J1Q8NGP2 316 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 LHFPL5Q8TAF8 219 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 TIFAQ96CG3 184 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 OTUB2Q96DC9 234 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 SLC2A11Q9BYW1 496 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 EIF5A2Q9GZV4 153 aaKnown RBP5.77□□□□□ -1.49
PTPRD-214ENST00000540109 MRPL15Q9P015 296 aaKnown RBP5.77□□□□□ -1.49
PTPRD-214ENST00000540109 TRPC4Q9UBN4 977 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 INSL5Q9Y5Q6 135 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 DOCK4Q8N1I0 1966 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 H3BNC9 293 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 RFXANKO14593 260 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 AGPAT2O15120 278 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 SNRNP70P08621 437 aaKnown RBP5.77□□□□□ -1.49
PTPRD-214ENST00000540109 RPS19P39019 145 aaKnown RBP5.77□□□□□ -1.49
PTPRD-214ENST00000540109 CCR10P46092 362 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 CDH12P55289 794 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 RAB1AP62820 205 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 ZNF600Q6ZNG1 722 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 CTU1Q7Z7A3 348 aaKnown RBP5.77□□□□□ -1.49
PTPRD-214ENST00000540109 ZSWIM9Q86XI8 627 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 PLPP6Q8IY26 295 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 OR4D10Q8NGI6 311 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 ADAMTS19Q8TE59 1207 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 TWIST2Q8WVJ9 160 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 CORO2AQ92828 525 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 TMEM80Q96HE8 168 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 ACTL8Q9H568 366 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 SMCO4Q9NRQ5 59 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 GPATCH2Q9NW75 528 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 ZNF639Q9UID6 485 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 RAI2Q9Y5P3 530 aa5.77□□□□□ -1.49
PTPRD-214ENST00000540109 NYNRINQ9P2P1 1898 aaKnown RBP5.76□□□□□ -1.49
PTPRD-214ENST00000540109 K7EPK0 472 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 KLK8O60259 260 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 ADH1AP07327 375 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 TACSTD2P09758 323 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 C6P13671 934 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 HMGA1P17096 107 aaKnown RBP5.76□□□□□ -1.49
PTPRD-214ENST00000540109 DRD5P21918 477 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 GSK3BP49841 420 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 TAS2R31P59538 309 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 AIMP2Q13155 320 aaKnown RBP5.76□□□□□ -1.49
PTPRD-214ENST00000540109 RPL22L1Q6P5R6 122 aaKnown RBP5.76□□□□□ -1.49
PTPRD-214ENST00000540109 SYT12Q8IV01 421 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 CMIPQ8IY22 773 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 STPG2Q8N412 459 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 FAM71E2Q8N5Q1 922 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 PAPD5Q8NDF8 572 aaKnown RBP5.76□□□□□ -1.49
PTPRD-214ENST00000540109 CHDHQ8NE62 594 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-214ENST00000540109 LRRC58Q96CX6 371 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 MYOCQ99972 504 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 LYARQ9NX58 379 aaKnown RBP5.76□□□□□ -1.49
PTPRD-214ENST00000540109 RPS6KB2Q9UBS0 482 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 KIAA1671Q9BY89 1806 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 TTC3P53804 2025 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 A0A1B0GV50 99 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 A0A1W2PRQ8 180 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 RGS11O94810 467 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 LRG1P02750 347 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 CATP04040 527 aaKnown RBP5.76□□□□□ -1.49
PTPRD-214ENST00000540109 SERPINA4P29622 427 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 VASPP50552 380 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-214ENST00000540109 PEA15Q15121 130 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 AANATQ16613 207 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 ZNF630Q2M218 657 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-214ENST00000540109 PDZD11Q5EBL8 140 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 ZNF678Q5SXM1 525 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 SDHAF4Q5VUM1 108 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 BRAT1Q6PJG6 821 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 CLEC9AQ6UXN8 241 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 HTR3DQ70Z44 454 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 COMMD1Q8N668 190 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 BBS1Q8NFJ9 593 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 MFSD8Q8NHS3 518 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 GEMIN6Q8WXD5 167 aaKnown RBP5.76□□□□□ -1.49
PTPRD-214ENST00000540109 ZIC5Q96T25 663 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 TUBB1Q9H4B7 451 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 OR2S2Q9NQN1 319 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 SLC2A6Q9UGQ3 507 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 ZDHHC2Q9UIJ5 367 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 SARDHQ9UL12 918 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 TBX21Q9UL17 535 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 C13orf42A0A1B0GVH6 325 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 RPS10-NUDT3A0A1W2PQS6 291 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 UBFD1O14562 309 aaKnown RBP5.76□□□□□ -1.49
PTPRD-214ENST00000540109 TFP02787 698 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 CAPNS1P04632 268 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 HTR1BP28222 390 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 CHRNA4P43681 627 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 RPS10P46783 165 aaKnown RBP5.76□□□□□ -1.49
PTPRD-214ENST00000540109 NDUFA6P56556 154 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 TNFRSF17Q02223 184 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 ZNF155Q12901 538 aaPredicted RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms