RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 COQ8AQ8NI60 647 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 MS4A4EQ96PG1 132 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 CPEB1Q9BZB8 566 aaKnown RBP6.17□□□□□ -1.42
LSAMP-207ENST00000539563 PDLIM7Q9NR12 457 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 UBQLN2Q9UHD9 624 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 PCTPQ9UKL6 214 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 OR1A2Q9Y585 309 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 BLACEA4D250 179 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 CDC123O75794 336 aaPredicted RBP6.17□□□□□ -1.42
LSAMP-207ENST00000539563 PTGS2P35354 604 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 SOX2P48431 317 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 NOVP48745 357 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 ERVPABLB-1P60509 514 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 ACY1Q03154 408 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 DNASE1L3Q13609 305 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 APOFQ13790 326 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 LAPTM4AQ15012 233 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 ZNF100Q8IYN0 542 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 RPLP0P6Q8NHW5 317 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 SPTSSAQ969W0 71 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 PINK1Q9BXM7 581 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 ADAM18Q9Y3Q7 739 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 H3BSH0 61 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 E2F3O00716 465 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 IFNA2P01563 188 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 PNMTP11086 282 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 CDK2P24941 298 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 MAP2K3P46734 347 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 MTNR1AP48039 350 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 FAM69BQ5VUD6 431 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 FBXO46Q6PJ61 603 aaPredicted RBP6.17□□□□□ -1.42
LSAMP-207ENST00000539563 PEX11GQ96HA9 241 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 ZNF696Q9H7X3 374 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 KCNK12Q9HB15 430 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 PLCH1Q4KWH8 1693 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 LOC100509620A0A075B734 347 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 CLCA1A8K7I4 914 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 PLD2O14939 933 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 ITGB7P26010 798 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 SH3BP2P78314 561 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 LCTLQ6UWM7 567 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 RBM12BQ8IXT5 1001 aaKnown RBP6.17□□□□□ -1.42
LSAMP-207ENST00000539563 Q8N402 240 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 DENND6BQ8NEG7 585 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 DNAAF1Q8NEP3 725 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 LGALS12Q96DT0 336 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 FAM46AQ96IP4 442 aaKnown RBP6.17□□□□□ -1.42
LSAMP-207ENST00000539563 MGLLQ99685 303 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 FOLH1BQ9HBA9 442 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 NCDNQ9UBB6 729 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 TRAPPC13A5PLN9 417 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 ATE1O95260 518 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 OSMP13725 252 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 GGT2P36268 569 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 CTC1Q2NKJ3 1217 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 CARD17Q5XLA6 110 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 RABEPKQ7Z6M1 372 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 TREML1Q86YW5 311 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 GALNT11Q8NCW6 608 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 CNIH3Q8TBE1 160 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 PAAF1Q9BRP4 392 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 GIMAP2Q9UG22 337 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 BTNL2Q9UIR0 455 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 KCNS2Q9ULS6 477 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 AP1M2Q9Y6Q5 423 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 SF3B4Q15427 424 aaKnown RBP eCLIP6.17□□□□□ -1.42
LSAMP-207ENST00000539563 NSDHLQ15738 373 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 NDUFAF5Q5TEU4 345 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 C17orf99Q6UX52 265 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 PRSS48Q7RTY5 328 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 SCML4Q8N228 414 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 ZBTB8BQ8NAP8 495 aaPredicted RBP6.17□□□□□ -1.42
LSAMP-207ENST00000539563 OR51A7Q8NH64 312 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 GPN2Q9H9Y4 310 aaPredicted RBP6.17□□□□□ -1.42
LSAMP-207ENST00000539563 PARPBPQ9NWS1 579 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 COPZ2Q9P299 210 aa6.17□□□□□ -1.42
LSAMP-207ENST00000539563 PRAMEF26H0Y7S4 382 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 RETP07949 1114 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 IFNGR1P15260 489 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 AGTR1P30556 359 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 GPR4P46093 362 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 DAP3P51398 398 aaKnown RBP6.16□□□□□ -1.42
LSAMP-207ENST00000539563 GRIN2CQ14957 1233 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 ARHGAP19Q14CB8 494 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 RAB11BQ15907 218 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 ZNF423Q2M1K9 1284 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 C22orf42Q6IC83 251 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 CRTC1Q6UUV9 634 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 LHFPL3Q86UP9 236 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 TMPRSS12Q86WS5 348 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 CPXM2Q8N436 756 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 MS4A15Q8N5U1 240 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 NPWQ8N729 165 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 OR52B6Q8NGF0 335 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 OR5J2Q8NH18 312 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 OR8K5Q8NH50 307 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 FAM3CQ92520 227 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 FAM46BQ96A09 425 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 LRR1Q96L50 414 aa6.16□□□□□ -1.42
LSAMP-207ENST00000539563 PHOX2BQ99453 314 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms