RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 RRP15Q9Y3B9 282 aaKnown RBP12.05□□□□□ -0.48
CCDC42-202ENST00000539522 ATRXP46100 2492 aa12.05□□□□□ -0.48
CCDC42-202ENST00000539522 ZFYVE26Q68DK2 2539 aa12.04□□□□□ -0.48
CCDC42-202ENST00000539522 SYNDIG1LA6NDD5 238 aa12.04□□□□□ -0.48
CCDC42-202ENST00000539522 NR5A2O00482 541 aa12.04□□□□□ -0.48
CCDC42-202ENST00000539522 ANGPT2O15123 496 aa12.04□□□□□ -0.48
CCDC42-202ENST00000539522 CFLARO15519 480 aa12.04□□□□□ -0.48
CCDC42-202ENST00000539522 NPPAP01160 153 aa12.04□□□□□ -0.48
CCDC42-202ENST00000539522 NQO1P15559 274 aaKnown RBP12.04□□□□□ -0.48
CCDC42-202ENST00000539522 CPOXP36551 454 aa12.04□□□□□ -0.48
CCDC42-202ENST00000539522 MAP3K8P41279 467 aa12.04□□□□□ -0.48
CCDC42-202ENST00000539522 CLCN2P51788 898 aa12.04□□□□□ -0.48
CCDC42-202ENST00000539522 SRSF11Q05519 484 aaKnown RBP12.04□□□□□ -0.48
CCDC42-202ENST00000539522 HSPB3Q12988 150 aa12.04□□□□□ -0.48
CCDC42-202ENST00000539522 GAB1Q13480 694 aa12.04□□□□□ -0.48
CCDC42-202ENST00000539522 RCAN2Q14206 197 aa12.04□□□□□ -0.48
CCDC42-202ENST00000539522 TLR1Q15399 786 aa12.04□□□□□ -0.48
CCDC42-202ENST00000539522 PGS1Q32NB8 556 aa12.04□□□□□ -0.48
CCDC42-202ENST00000539522 VPS26BQ4G0F5 336 aa12.04□□□□□ -0.48
CCDC42-202ENST00000539522 TCTN3Q6NUS6 607 aa12.04□□□□□ -0.48
CCDC42-202ENST00000539522 NPSR1Q6W5P4 371 aa12.04□□□□□ -0.48
CCDC42-202ENST00000539522 HACD2Q6Y1H2 254 aa12.04□□□□□ -0.48
CCDC42-202ENST00000539522 ARHGAP24Q8N264 748 aa12.04□□□□□ -0.48
CCDC42-202ENST00000539522 C7orf57Q8NEG2 295 aa12.04□□□□□ -0.48
CCDC42-202ENST00000539522 OR52R1Q8NGF1 315 aa12.04□□□□□ -0.48
CCDC42-202ENST00000539522 THAP3Q8WTV1 239 aaPredicted RBP12.04□□□□□ -0.48
CCDC42-202ENST00000539522 HOXB13Q92826 284 aaPredicted RBP12.04□□□□□ -0.48
CCDC42-202ENST00000539522 VPS33AQ96AX1 596 aa12.04□□□□□ -0.48
CCDC42-202ENST00000539522 ROPN1LQ96C74 230 aa12.04□□□□□ -0.48
CCDC42-202ENST00000539522 RCN3Q96D15 328 aa12.04□□□□□ -0.48
CCDC42-202ENST00000539522 BBS4Q96RK4 519 aa12.04□□□□□ -0.48
CCDC42-202ENST00000539522 LMF1Q96S06 567 aa12.04□□□□□ -0.48
CCDC42-202ENST00000539522 PRPF18Q99633 342 aaKnown RBP12.04□□□□□ -0.48
CCDC42-202ENST00000539522 SERHL2Q9H4I8 314 aa12.04□□□□□ -0.48
CCDC42-202ENST00000539522 GID8Q9NWU2 228 aa12.04□□□□□ -0.48
CCDC42-202ENST00000539522 C19orf53Q9UNZ5 99 aaPredicted RBP12.04□□□□□ -0.48
CCDC42-202ENST00000539522 PCDHGA9Q9Y5G4 932 aaKnown RBP12.04□□□□□ -0.48
CCDC42-202ENST00000539522 CFAP46Q8IYW2 2715 aa12.04□□□□□ -0.48
CCDC42-202ENST00000539522 CHD6Q8TD26 2715 aa12.04□□□□□ -0.48
CCDC42-202ENST00000539522 EML6Q6ZMW3 1958 aa12.03□□□□□ -0.48
CCDC42-202ENST00000539522 CACNA1BQ00975 2339 aa12.03□□□□□ -0.48
CCDC42-202ENST00000539522 A0A087WV62 115 aa12.03□□□□□ -0.48
CCDC42-202ENST00000539522 A0A1W2PRB8 838 aa12.03□□□□□ -0.48
CCDC42-202ENST00000539522 RNASET2O00584 256 aaKnown RBP12.03□□□□□ -0.48
CCDC42-202ENST00000539522 FBP2O00757 339 aa12.03□□□□□ -0.48
CCDC42-202ENST00000539522 MRASO14807 208 aa12.03□□□□□ -0.48
CCDC42-202ENST00000539522 PGRP06401 933 aa12.03□□□□□ -0.48
CCDC42-202ENST00000539522 IFI6P09912 130 aa12.03□□□□□ -0.48
CCDC42-202ENST00000539522 ICAM2P13598 275 aa12.03□□□□□ -0.48
CCDC42-202ENST00000539522 DDX5P17844 614 aaKnown RBP12.03□□□□□ -0.48
CCDC42-202ENST00000539522 S100A3P33764 101 aa12.03□□□□□ -0.48
CCDC42-202ENST00000539522 MPIP34949 423 aa12.03□□□□□ -0.48
CCDC42-202ENST00000539522 PGM1P36871 562 aa12.03□□□□□ -0.48
CCDC42-202ENST00000539522 KIR3DL1P43629 444 aa12.03□□□□□ -0.48
CCDC42-202ENST00000539522 MLF1P58340 268 aa12.03□□□□□ -0.48
CCDC42-202ENST00000539522 SLC25A3Q00325 362 aa12.03□□□□□ -0.48
CCDC42-202ENST00000539522 RHDQ02161 417 aa12.03□□□□□ -0.48
CCDC42-202ENST00000539522 KCNAB2Q13303 367 aa12.03□□□□□ -0.48
CCDC42-202ENST00000539522 LY6DQ14210 128 aa12.03□□□□□ -0.48
CCDC42-202ENST00000539522 DPY19L1Q2PZI1 675 aa12.03□□□□□ -0.48
CCDC42-202ENST00000539522 JMJD6Q6NYC1 403 aaPredicted RBP12.03□□□□□ -0.48
CCDC42-202ENST00000539522 WDR53Q7Z5U6 358 aaPredicted RBP12.03□□□□□ -0.48
CCDC42-202ENST00000539522 BEST3Q8N1M1 668 aa12.03□□□□□ -0.48
CCDC42-202ENST00000539522 OR8K3Q8NH51 312 aa12.03□□□□□ -0.48
CCDC42-202ENST00000539522 FBXO27Q8NI29 283 aa12.03□□□□□ -0.48
CCDC42-202ENST00000539522 OR5P2Q8WZ92 322 aa12.03□□□□□ -0.48
CCDC42-202ENST00000539522 MCUR1Q96AQ8 359 aa12.03□□□□□ -0.48
CCDC42-202ENST00000539522 FAM120BQ96EK7 910 aaKnown RBP12.03□□□□□ -0.48
CCDC42-202ENST00000539522 VSTM2LQ96N03 204 aa12.03□□□□□ -0.48
CCDC42-202ENST00000539522 HOPXQ9BPY8 73 aaPredicted RBP12.03□□□□□ -0.48
CCDC42-202ENST00000539522 ITPAQ9BY32 194 aa12.03□□□□□ -0.48
CCDC42-202ENST00000539522 CADM1Q9BY67 442 aaKnown RBP12.03□□□□□ -0.48
CCDC42-202ENST00000539522 WWTR1Q9GZV5 400 aa12.03□□□□□ -0.48
CCDC42-202ENST00000539522 CDCP1Q9H5V8 836 aa12.03□□□□□ -0.48
CCDC42-202ENST00000539522 EPS8L2Q9H6S3 715 aa12.03□□□□□ -0.48
CCDC42-202ENST00000539522 PLA2G3Q9NZ20 509 aa12.03□□□□□ -0.48
CCDC42-202ENST00000539522 LEF1Q9UJU2 399 aaPredicted RBP12.03□□□□□ -0.48
CCDC42-202ENST00000539522 RALYQ9UKM9 306 aaKnown RBP12.03□□□□□ -0.48
CCDC42-202ENST00000539522 LHX6Q9UPM6 363 aa12.03□□□□□ -0.48
CCDC42-202ENST00000539522 TP53TG5Q9Y2B4 290 aa12.03□□□□□ -0.48
CCDC42-202ENST00000539522 A8MUI8 341 aa12.02□□□□□ -0.49
CCDC42-202ENST00000539522 ERVH48-1M5A8F1 160 aa12.02□□□□□ -0.49
CCDC42-202ENST00000539522 WWP2O00308 870 aa12.02□□□□□ -0.49
CCDC42-202ENST00000539522 F10P00742 488 aa12.02□□□□□ -0.49
CCDC42-202ENST00000539522 CT45A8P0DMV1 189 aa12.02□□□□□ -0.49
CCDC42-202ENST00000539522 CT45A9P0DMV2 189 aa12.02□□□□□ -0.49
CCDC42-202ENST00000539522 NTSP30990 170 aa12.02□□□□□ -0.49
CCDC42-202ENST00000539522 NUDT2P50583 147 aa12.02□□□□□ -0.49
CCDC42-202ENST00000539522 MANFP55145 182 aaKnown RBP12.02□□□□□ -0.49
CCDC42-202ENST00000539522 PSG6Q00889 435 aa12.02□□□□□ -0.49
CCDC42-202ENST00000539522 GTDC1Q4AE62 458 aa12.02□□□□□ -0.49
CCDC42-202ENST00000539522 TIGD2Q4W5G0 525 aa12.02□□□□□ -0.49
CCDC42-202ENST00000539522 CT45A2Q5DJT8 189 aa12.02□□□□□ -0.49
CCDC42-202ENST00000539522 CRB2Q5IJ48 1285 aa12.02□□□□□ -0.49
CCDC42-202ENST00000539522 PAGE3Q5JUK9 113 aa12.02□□□□□ -0.49
CCDC42-202ENST00000539522 ACER2Q5QJU3 275 aa12.02□□□□□ -0.49
CCDC42-202ENST00000539522 REP15Q6BDI9 236 aa12.02□□□□□ -0.49
CCDC42-202ENST00000539522 DESI1Q6ICB0 168 aa12.02□□□□□ -0.49
CCDC42-202ENST00000539522 SLC2A7Q6PXP3 512 aa12.02□□□□□ -0.49
CCDC42-202ENST00000539522 HSDL2Q6YN16 418 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms