RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 PAHP00439 452 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 IQCF3P0C7M6 154 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 PRKAR1AP10644 381 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 MSH3P20585 1137 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 TNFSF10P50591 281 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 CNN1P51911 297 aaKnown RBP0.89□□□□□ -2.27
HIF1A-204ENST00000539097 PLK1P53350 603 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 HMGN5P82970 282 aaKnown RBP0.89□□□□□ -2.27
HIF1A-204ENST00000539097 AKAP17AQ02040 695 aaKnown RBP0.89□□□□□ -2.27
HIF1A-204ENST00000539097 ENPP2Q13822 863 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 GIT2Q14161 759 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 SSX2Q16385 188 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 IFI44LQ53G44 452 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 AP1ARQ63HQ0 302 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 RFWD3Q6PCD5 774 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 AMZ2Q86W34 360 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 IFNEQ86WN2 208 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF683Q8IZ20 524 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 TEX26Q8N6G2 289 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP0.89□□□□□ -2.27
HIF1A-204ENST00000539097 GATSQ8NAP1 163 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 LEMD2Q8NC56 503 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 TMEM185AQ8NFB2 350 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 OR52K2Q8NGK3 314 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 OR52M1Q8NGK5 317 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 OR1J1Q8NGS3 322 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 CCDC26Q8TAB7 109 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 GPR148Q8TDV2 347 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 SCARB1Q8WTV0 552 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 TMIGD2Q96BF3 282 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 FAM210BQ96KR6 192 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 RBM14Q96PK6 669 aaKnown RBP0.89□□□□□ -2.27
HIF1A-204ENST00000539097 ALKBH7Q9BT30 221 aaPredicted RBP0.89□□□□□ -2.27
HIF1A-204ENST00000539097 TRMT61BQ9BVS5 477 aaKnown RBP0.89□□□□□ -2.27
HIF1A-204ENST00000539097 POLR3FQ9H1D9 316 aaPredicted RBP0.89□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF71Q9NQZ8 489 aaPredicted RBP0.89□□□□□ -2.27
HIF1A-204ENST00000539097 QPCTLQ9NXS2 382 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 WWOXQ9NZC7 414 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 THAP10Q9P2Z0 257 aaPredicted RBP0.89□□□□□ -2.27
HIF1A-204ENST00000539097 IL20RAQ9UHF4 553 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 PILRBQ9UKJ0 227 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 RRP15Q9Y3B9 282 aaKnown RBP0.89□□□□□ -2.27
HIF1A-204ENST00000539097 ZHX2Q9Y6X8 837 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 HCFC1P51610 2035 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 ERCC6Q03468 1493 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 WIZO95785 1651 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 HSPG2P98160 4391 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 LRRK1Q38SD2 2015 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 A0A0U1RQV5 110 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 A0A1B0GUL7 405 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 TRIM49BA6NDI0 452 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 HHLA1C9JL84 531 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 BTN3A3O00478 584 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 SNX4O95219 450 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 SEC24AO95486 1093 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 GUCA1CO95843 209 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 BMP15O95972 392 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 NGFRP08138 427 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 NCF1P14598 390 aaPredicted RBP0.88□□□□□ -2.27
HIF1A-204ENST00000539097 C4BPBP20851 252 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 NT5EP21589 574 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 MAP2K2P36507 400 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 ATP6V1E1P36543 226 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 KIR2DS2P43631 304 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 RPS8P62241 208 aaKnown RBP0.88□□□□□ -2.27
HIF1A-204ENST00000539097 ACY1Q03154 408 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 ELAVL2Q12926 359 aaKnown RBP0.88□□□□□ -2.27
HIF1A-204ENST00000539097 SPHARQ15513 63 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 ACKR1Q16570 336 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 MPPE1Q53F39 396 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 NKAIN2Q5VXU1 208 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 SNRNP48Q6IEG0 339 aaKnown RBP0.88□□□□□ -2.27
HIF1A-204ENST00000539097 SULT1C3Q6IMI6 304 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 SLC25A24Q6NUK1 477 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 ADAM5Q6NVV9 412 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 ASRGL1Q7L266 308 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 C16orf62Q7Z3J2 963 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 KCNMB4Q86W47 210 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 KIRREL3Q8IZU9 778 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 CCNYQ8ND76 341 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 SSC4DQ8WTU2 575 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 RAB7BQ96AH8 199 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 SH3YL1Q96HL8 342 aaPredicted RBP0.88□□□□□ -2.27
HIF1A-204ENST00000539097 TPD52L3Q96J77 140 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 VPS39Q96JC1 886 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 ST6GAL2Q96JF0 529 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 C2orf48Q96LS8 159 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 TCEANC2Q96MN5 208 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 IL17FQ96PD4 163 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 ZBTB18Q99592 522 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 GPR174Q9BXC1 333 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 DUSP16Q9BY84 665 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 RAB34Q9BZG1 259 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 ABCG8Q9H221 673 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 CUEDC2Q9H467 287 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 NTN4Q9HB63 628 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 FARSBQ9NSD9 589 aaKnown RBP0.88□□□□□ -2.27
HIF1A-204ENST00000539097 DONSONQ9NYP3 566 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 TECRQ9NZ01 308 aaKnown RBP0.88□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF282Q9UDV7 671 aaPredicted RBP0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms