RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 RAB10P61026 200 aa12.71□□□□□ -0.37
SMARCA4-206ENST00000538456 PHEXP78562 749 aa12.71□□□□□ -0.37
SMARCA4-206ENST00000538456 CBLBQ13191 982 aa12.71□□□□□ -0.37
SMARCA4-206ENST00000538456 GAB1Q13480 694 aa12.71□□□□□ -0.37
SMARCA4-206ENST00000538456 NUDT13Q86X67 352 aa12.71□□□□□ -0.37
SMARCA4-206ENST00000538456 CNEP1R1Q8N9A8 125 aa12.71□□□□□ -0.37
SMARCA4-206ENST00000538456 C17orf47Q8NEP4 570 aa12.71□□□□□ -0.37
SMARCA4-206ENST00000538456 OMA1Q96E52 524 aa12.71□□□□□ -0.37
SMARCA4-206ENST00000538456 RBBP8Q99708 897 aa12.71□□□□□ -0.37
SMARCA4-206ENST00000538456 ITPAQ9BY32 194 aa12.71□□□□□ -0.37
SMARCA4-206ENST00000538456 OR2B2Q9GZK3 357 aa12.71□□□□□ -0.37
SMARCA4-206ENST00000538456 DDX31Q9H8H2 851 aaKnown RBP12.71□□□□□ -0.37
SMARCA4-206ENST00000538456 ACTR8Q9H981 624 aa12.71□□□□□ -0.37
SMARCA4-206ENST00000538456 ZNF226Q9NYT6 803 aa12.71□□□□□ -0.37
SMARCA4-206ENST00000538456 PCDHGA11Q9Y5H2 935 aa12.71□□□□□ -0.37
SMARCA4-206ENST00000538456 MXRA5Q9NR99 2828 aa12.71□□□□□ -0.37
SMARCA4-206ENST00000538456 E7ESA3 106 aa12.7□□□□□ -0.38
SMARCA4-206ENST00000538456 PLOD2O00469 737 aa12.7□□□□□ -0.38
SMARCA4-206ENST00000538456 MSTNO14793 375 aa12.7□□□□□ -0.38
SMARCA4-206ENST00000538456 TGM6O95932 706 aa12.7□□□□□ -0.38
SMARCA4-206ENST00000538456 SSTR1P30872 391 aa12.7□□□□□ -0.38
SMARCA4-206ENST00000538456 PTGDSP41222 190 aa12.7□□□□□ -0.38
SMARCA4-206ENST00000538456 MC3RP41968 323 aa12.7□□□□□ -0.38
SMARCA4-206ENST00000538456 PIK3CGP48736 1102 aa12.7□□□□□ -0.38
SMARCA4-206ENST00000538456 NEK2P51955 445 aa12.7□□□□□ -0.38
SMARCA4-206ENST00000538456 GFRA1P56159 465 aa12.7□□□□□ -0.38
SMARCA4-206ENST00000538456 PLCXD2Q0VAA5 305 aa12.7□□□□□ -0.38
SMARCA4-206ENST00000538456 ILF2Q12905 390 aaKnown RBP12.7□□□□□ -0.38
SMARCA4-206ENST00000538456 DLG1Q12959 904 aa12.7□□□□□ -0.38
SMARCA4-206ENST00000538456 SLMAPQ14BN4 828 aa12.7□□□□□ -0.38
SMARCA4-206ENST00000538456 EXOSC7Q15024 291 aaKnown RBP12.7□□□□□ -0.38
SMARCA4-206ENST00000538456 ZKSCAN8Q15776 578 aaPredicted RBP12.7□□□□□ -0.38
SMARCA4-206ENST00000538456 CPSF6Q16630 551 aaKnown RBP eCLIP12.7□□□□□ -0.38
SMARCA4-206ENST00000538456 SLC30A6Q6NXT4 461 aa12.7□□□□□ -0.38
SMARCA4-206ENST00000538456 RAPH1Q70E73 1250 aa12.7□□□□□ -0.38
SMARCA4-206ENST00000538456 P4HA3Q7Z4N8 544 aa12.7□□□□□ -0.38
SMARCA4-206ENST00000538456 CMC1Q7Z7K0 106 aa12.7□□□□□ -0.38
SMARCA4-206ENST00000538456 ISCA2Q86U28 154 aa12.7□□□□□ -0.38
SMARCA4-206ENST00000538456 OR7G1Q8NGA0 311 aa12.7□□□□□ -0.38
SMARCA4-206ENST00000538456 OR4K14Q8NGD5 310 aa12.7□□□□□ -0.38
SMARCA4-206ENST00000538456 PPP1R14CQ8TAE6 165 aa12.7□□□□□ -0.38
SMARCA4-206ENST00000538456 CDKL2Q92772 493 aa12.7□□□□□ -0.38
SMARCA4-206ENST00000538456 HGDQ93099 445 aa12.7□□□□□ -0.38
SMARCA4-206ENST00000538456 ZC3HAV1LQ96H79 300 aaKnown RBP12.7□□□□□ -0.38
SMARCA4-206ENST00000538456 HS3ST6Q96QI5 342 aa12.7□□□□□ -0.38
SMARCA4-206ENST00000538456 ATOH8Q96SQ7 321 aa12.7□□□□□ -0.38
SMARCA4-206ENST00000538456 CPNE1Q99829 537 aa12.7□□□□□ -0.38
SMARCA4-206ENST00000538456 TAS2R10Q9NYW0 307 aa12.7□□□□□ -0.38
SMARCA4-206ENST00000538456 BCAP29Q9UHQ4 241 aa12.7□□□□□ -0.38
SMARCA4-206ENST00000538456 EXO1Q9UQ84 846 aaKnown RBP12.7□□□□□ -0.38
SMARCA4-206ENST00000538456 USF3Q68DE3 2245 aa12.7□□□□□ -0.38
SMARCA4-206ENST00000538456 PRAMEF25A6NGN4 478 aa12.69□□□□□ -0.38
SMARCA4-206ENST00000538456 LRRC14BA6NHZ5 514 aa12.69□□□□□ -0.38
SMARCA4-206ENST00000538456 KERAO60938 352 aa12.69□□□□□ -0.38
SMARCA4-206ENST00000538456 UGT2B11O75310 529 aa12.69□□□□□ -0.38
SMARCA4-206ENST00000538456 CBR3O75828 277 aa12.69□□□□□ -0.38
SMARCA4-206ENST00000538456 CNOT4O95628 575 aaKnown RBP12.69□□□□□ -0.38
SMARCA4-206ENST00000538456 RHOXF2BP0C7M4 288 aa12.69□□□□□ -0.38
SMARCA4-206ENST00000538456 CPMP14384 443 aa12.69□□□□□ -0.38
SMARCA4-206ENST00000538456 NID1P14543 1247 aa12.69□□□□□ -0.38
SMARCA4-206ENST00000538456 CRYGSP22914 178 aa12.69□□□□□ -0.38
SMARCA4-206ENST00000538456 CCKARP32238 428 aa12.69□□□□□ -0.38
SMARCA4-206ENST00000538456 PTH2RP49190 550 aa12.69□□□□□ -0.38
SMARCA4-206ENST00000538456 LHX2P50458 406 aa12.69□□□□□ -0.38
SMARCA4-206ENST00000538456 XKP51811 444 aa12.69□□□□□ -0.38
SMARCA4-206ENST00000538456 ARFIP1P53367 373 aa12.69□□□□□ -0.38
SMARCA4-206ENST00000538456 CUL3Q13618 768 aa12.69□□□□□ -0.38
SMARCA4-206ENST00000538456 LIPJQ5W064 366 aa12.69□□□□□ -0.38
SMARCA4-206ENST00000538456 VWA1Q6PCB0 445 aa12.69□□□□□ -0.38
SMARCA4-206ENST00000538456 AAGABQ6PD74 315 aa12.69□□□□□ -0.38
SMARCA4-206ENST00000538456 SCIMPQ6UWF3 145 aa12.69□□□□□ -0.38
SMARCA4-206ENST00000538456 C20orf204Q6ZNR8 217 aa12.69□□□□□ -0.38
SMARCA4-206ENST00000538456 ZNF550Q7Z398 422 aa12.69□□□□□ -0.38
SMARCA4-206ENST00000538456 NUP54Q7Z3B4 507 aa12.69□□□□□ -0.38
SMARCA4-206ENST00000538456 WDSUB1Q8N9V3 476 aa12.69□□□□□ -0.38
SMARCA4-206ENST00000538456 PYROXD1Q8WU10 500 aa12.69□□□□□ -0.38
SMARCA4-206ENST00000538456 NANOS1Q8WY41 292 aaKnown RBP12.69□□□□□ -0.38
SMARCA4-206ENST00000538456 CTHRC1Q96CG8 243 aa12.69□□□□□ -0.38
SMARCA4-206ENST00000538456 REPS1Q96D71 796 aa12.69□□□□□ -0.38
SMARCA4-206ENST00000538456 SFXN2Q96NB2 322 aa12.69□□□□□ -0.38
SMARCA4-206ENST00000538456 UCN2Q96RP3 112 aa12.69□□□□□ -0.38
SMARCA4-206ENST00000538456 BRINP2Q9C0B6 783 aa12.69□□□□□ -0.38
SMARCA4-206ENST00000538456 OPN3Q9H1Y3 402 aaPredicted RBP12.69□□□□□ -0.38
SMARCA4-206ENST00000538456 FBXL2Q9UKC9 423 aa12.69□□□□□ -0.38
SMARCA4-206ENST00000538456 TSC22D4Q9Y3Q8 395 aa12.69□□□□□ -0.38
SMARCA4-206ENST00000538456 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.69□□□□□ -0.38
SMARCA4-206ENST00000538456 H0YIV9 168 aa12.68□□□□□ -0.38
SMARCA4-206ENST00000538456 PORP16435 677 aaPredicted RBP12.68□□□□□ -0.38
SMARCA4-206ENST00000538456 ZNF708P17019 499 aa12.68□□□□□ -0.38
SMARCA4-206ENST00000538456 NAGAP17050 411 aa12.68□□□□□ -0.38
SMARCA4-206ENST00000538456 S1PR1P21453 382 aa12.68□□□□□ -0.38
SMARCA4-206ENST00000538456 CHMP24386 653 aa12.68□□□□□ -0.38
SMARCA4-206ENST00000538456 UGT2B10P36537 528 aa12.68□□□□□ -0.38
SMARCA4-206ENST00000538456 GP5P40197 560 aa12.68□□□□□ -0.38
SMARCA4-206ENST00000538456 CD79BP40259 229 aa12.68□□□□□ -0.38
SMARCA4-206ENST00000538456 ARL1P40616 181 aaPredicted RBP12.68□□□□□ -0.38
SMARCA4-206ENST00000538456 KCNJ5P48544 419 aa12.68□□□□□ -0.38
SMARCA4-206ENST00000538456 CLDN18P56856 261 aa12.68□□□□□ -0.38
SMARCA4-206ENST00000538456 EEF1A1P68104 462 aaKnown RBP12.68□□□□□ -0.38
SMARCA4-206ENST00000538456 SIRPAP78324 504 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms