RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 ZER1Q7Z7L7 766 aa11.47□□□□□ -0.57
CPSF7-218ENST00000537641 RBM45Q8IUH3 476 aaKnown RBP11.47□□□□□ -0.57
CPSF7-218ENST00000537641 TBC1D19Q8N5T2 526 aa11.47□□□□□ -0.57
CPSF7-218ENST00000537641 MORN4Q8NDC4 146 aa11.47□□□□□ -0.57
CPSF7-218ENST00000537641 OR2A12Q8NGT7 310 aa11.47□□□□□ -0.57
CPSF7-218ENST00000537641 BBS10Q8TAM1 723 aa11.47□□□□□ -0.57
CPSF7-218ENST00000537641 HCAR2Q8TDS4 363 aa11.47□□□□□ -0.57
CPSF7-218ENST00000537641 AKAP1Q92667 903 aaKnown RBP eCLIP11.47□□□□□ -0.57
CPSF7-218ENST00000537641 SNAPC3Q92966 411 aa11.47□□□□□ -0.57
CPSF7-218ENST00000537641 TMEM203Q969S6 136 aa11.47□□□□□ -0.57
CPSF7-218ENST00000537641 SLC35G5Q96KT7 338 aa11.47□□□□□ -0.57
CPSF7-218ENST00000537641 SPATA5L1Q9BVQ7 753 aa11.47□□□□□ -0.57
CPSF7-218ENST00000537641 FNDC11Q9BVV2 318 aa11.47□□□□□ -0.57
CPSF7-218ENST00000537641 RSPO3Q9BXY4 272 aaPredicted RBP11.47□□□□□ -0.57
CPSF7-218ENST00000537641 HCFC1R1Q9NWW0 138 aa11.47□□□□□ -0.57
CPSF7-218ENST00000537641 TOR4AQ9NXH8 423 aa11.47□□□□□ -0.57
CPSF7-218ENST00000537641 COMMD3Q9UBI1 195 aa11.47□□□□□ -0.57
CPSF7-218ENST00000537641 SLC9A8Q9Y2E8 581 aa11.47□□□□□ -0.57
CPSF7-218ENST00000537641 IRAK3Q9Y616 596 aa11.47□□□□□ -0.57
CPSF7-218ENST00000537641 A0A0X1KG70 313 aa11.46□□□□□ -0.57
CPSF7-218ENST00000537641 CHST10O43529 356 aa11.46□□□□□ -0.57
CPSF7-218ENST00000537641 SLC28A2O43868 658 aa11.46□□□□□ -0.57
CPSF7-218ENST00000537641 HPGDSO60760 199 aa11.46□□□□□ -0.57
CPSF7-218ENST00000537641 UBXN7O94888 489 aa11.46□□□□□ -0.57
CPSF7-218ENST00000537641 SOD1P00441 154 aa11.46□□□□□ -0.57
CPSF7-218ENST00000537641 ARSBP15848 533 aa11.46□□□□□ -0.57
CPSF7-218ENST00000537641 TIMP2P16035 220 aa11.46□□□□□ -0.57
CPSF7-218ENST00000537641 PPP2R1BP30154 601 aa11.46□□□□□ -0.57
CPSF7-218ENST00000537641 OR3A3P47888 321 aa11.46□□□□□ -0.57
CPSF7-218ENST00000537641 INPP1P49441 399 aa11.46□□□□□ -0.57
CPSF7-218ENST00000537641 ABATP80404 500 aa11.46□□□□□ -0.57
CPSF7-218ENST00000537641 MRPL28Q13084 256 aaKnown RBP11.46□□□□□ -0.57
CPSF7-218ENST00000537641 ADAM15Q13444 863 aa11.46□□□□□ -0.57
CPSF7-218ENST00000537641 IL18Q14116 193 aa11.46□□□□□ -0.57
CPSF7-218ENST00000537641 ARHGAP15Q53QZ3 475 aa11.46□□□□□ -0.57
CPSF7-218ENST00000537641 OR2G6Q5TZ20 316 aa11.46□□□□□ -0.57
CPSF7-218ENST00000537641 BICRALQ6AI39 1079 aa11.46□□□□□ -0.57
CPSF7-218ENST00000537641 PAMR1Q6UXH9 720 aa11.46□□□□□ -0.57
CPSF7-218ENST00000537641 TRILQ7L0X0 811 aa11.46□□□□□ -0.57
CPSF7-218ENST00000537641 IQCHQ86VS3 1027 aa11.46□□□□□ -0.57
CPSF7-218ENST00000537641 MMP21Q8N119 569 aa11.46□□□□□ -0.57
CPSF7-218ENST00000537641 ZNF485Q8NCK3 441 aa11.46□□□□□ -0.57
CPSF7-218ENST00000537641 TEX47Q8TBZ9 253 aa11.46□□□□□ -0.57
CPSF7-218ENST00000537641 GNPDA2Q8TDQ7 276 aa11.46□□□□□ -0.57
CPSF7-218ENST00000537641 ACOT12Q8WYK0 555 aa11.46□□□□□ -0.57
CPSF7-218ENST00000537641 MARVELD3Q96A59 401 aa11.46□□□□□ -0.57
CPSF7-218ENST00000537641 CREB3L1Q96BA8 519 aa11.46□□□□□ -0.57
CPSF7-218ENST00000537641 UPRTQ96BW1 309 aa11.46□□□□□ -0.57
CPSF7-218ENST00000537641 SLC38A2Q96QD8 506 aa11.46□□□□□ -0.57
CPSF7-218ENST00000537641 ZCCHC2Q9C0B9 1178 aaKnown RBP11.46□□□□□ -0.57
CPSF7-218ENST00000537641 RHBGQ9H310 441 aa11.46□□□□□ -0.57
CPSF7-218ENST00000537641 C11orf49Q9H6J7 331 aa11.46□□□□□ -0.57
CPSF7-218ENST00000537641 NT5DC2Q9H857 520 aa11.46□□□□□ -0.57
CPSF7-218ENST00000537641 ASB6Q9NWX5 421 aa11.46□□□□□ -0.57
CPSF7-218ENST00000537641 B3GNT2Q9NY97 397 aa11.46□□□□□ -0.57
CPSF7-218ENST00000537641 NOTCH4Q99466 2003 aa11.46□□□□□ -0.58
CPSF7-218ENST00000537641 PLPP1O14494 284 aa11.46□□□□□ -0.58
CPSF7-218ENST00000537641 AKAP8O43823 692 aaKnown RBP11.46□□□□□ -0.58
CPSF7-218ENST00000537641 HLA-DPB1P04440 258 aa11.46□□□□□ -0.58
CPSF7-218ENST00000537641 LIMS3P0CW19 117 aa11.46□□□□□ -0.58
CPSF7-218ENST00000537641 LIMS4P0CW20 117 aa11.46□□□□□ -0.58
CPSF7-218ENST00000537641 HK1P19367 917 aa11.46□□□□□ -0.58
CPSF7-218ENST00000537641 XPAP23025 273 aaPredicted RBP11.46□□□□□ -0.58
CPSF7-218ENST00000537641 IFNGR2P38484 337 aa11.46□□□□□ -0.58
CPSF7-218ENST00000537641 MTNR1AP48039 350 aa11.46□□□□□ -0.58
CPSF7-218ENST00000537641 MAPK12P53778 367 aa11.46□□□□□ -0.58
CPSF7-218ENST00000537641 HTRA3P83110 453 aa11.46□□□□□ -0.58
CPSF7-218ENST00000537641 MEF2AQ02078 507 aaPredicted RBP11.46□□□□□ -0.58
CPSF7-218ENST00000537641 PIN1Q13526 163 aaPredicted RBP11.46□□□□□ -0.58
CPSF7-218ENST00000537641 TYW3Q6IPR3 259 aaKnown RBP11.46□□□□□ -0.58
CPSF7-218ENST00000537641 SLC27A4Q6P1M0 643 aa11.46□□□□□ -0.58
CPSF7-218ENST00000537641 ZNF782Q6ZMW2 699 aaPredicted RBP11.46□□□□□ -0.58
CPSF7-218ENST00000537641 RTL10Q7L3V2 364 aa11.46□□□□□ -0.58
CPSF7-218ENST00000537641 FAM129CQ86XR2 697 aa11.46□□□□□ -0.58
CPSF7-218ENST00000537641 MARCH9Q86YJ5 346 aa11.46□□□□□ -0.58
CPSF7-218ENST00000537641 CCDC28AQ8IWP9 274 aa11.46□□□□□ -0.58
CPSF7-218ENST00000537641 ADGRF3Q8IZF5 1079 aa11.46□□□□□ -0.58
CPSF7-218ENST00000537641 ARIH2OSQ8N7S6 290 aa11.46□□□□□ -0.58
CPSF7-218ENST00000537641 POGLUT1Q8NBL1 392 aa11.46□□□□□ -0.58
CPSF7-218ENST00000537641 GATAD2BQ8WXI9 593 aa11.46□□□□□ -0.58
CPSF7-218ENST00000537641 RAB8BQ92930 207 aa11.46□□□□□ -0.58
CPSF7-218ENST00000537641 IRF7Q92985 503 aa11.46□□□□□ -0.58
CPSF7-218ENST00000537641 TM4SF18Q96CE8 201 aa11.46□□□□□ -0.58
CPSF7-218ENST00000537641 HYLS1Q96M11 299 aa11.46□□□□□ -0.58
CPSF7-218ENST00000537641 ZNF717Q9BY31 904 aaPredicted RBP11.46□□□□□ -0.58
CPSF7-218ENST00000537641 PELI2Q9HAT8 420 aa11.46□□□□□ -0.58
CPSF7-218ENST00000537641 FOLH1BQ9HBA9 442 aa11.46□□□□□ -0.58
CPSF7-218ENST00000537641 BCL2L10Q9HD36 194 aa11.46□□□□□ -0.58
CPSF7-218ENST00000537641 B3GAT2Q9NPZ5 323 aa11.46□□□□□ -0.58
CPSF7-218ENST00000537641 SPHK2Q9NRA0 654 aa11.46□□□□□ -0.58
CPSF7-218ENST00000537641 MAN2C1Q9NTJ4 1040 aa11.46□□□□□ -0.58
CPSF7-218ENST00000537641 ACSS1Q9NUB1 689 aaPredicted RBP11.46□□□□□ -0.58
CPSF7-218ENST00000537641 TDP1Q9NUW8 608 aa11.46□□□□□ -0.58
CPSF7-218ENST00000537641 NLKQ9UBE8 527 aa11.46□□□□□ -0.58
CPSF7-218ENST00000537641 CLCA2Q9UQC9 943 aa11.46□□□□□ -0.58
CPSF7-218ENST00000537641 TMA7Q9Y2S6 64 aaKnown RBP11.46□□□□□ -0.58
CPSF7-218ENST00000537641 PLXND1Q9Y4D7 1925 aa11.45□□□□□ -0.58
CPSF7-218ENST00000537641 PRR23AA6NEV1 266 aa11.45□□□□□ -0.58
CPSF7-218ENST00000537641 INMT-MINDY4F8WBC2 141 aa11.45□□□□□ -0.58
CPSF7-218ENST00000537641 M0R3H8 397 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms