RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 SVIPQ8NHG7 77 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 SPATA22Q8NHS9 363 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 IL31RAQ8NI17 732 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 SNX33Q8WV41 574 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 MRPL38Q96DV4 380 aaKnown RBP8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 OR2A7Q96R45 310 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 FCRL5Q96RD9 977 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 ZDHHC5Q9C0B5 715 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 TWSG1Q9GZX9 223 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 WDR26Q9H7D7 661 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 HMX1Q9NP08 348 aaPredicted RBP8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 PRDM5Q9NQX1 630 aaPredicted RBP8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 NLGN3Q9NZ94 848 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 VSX1Q9NZR4 365 aaPredicted RBP8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 PIPOXQ9P0Z9 390 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 NEU3Q9UQ49 428 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 CARHSP1Q9Y2V2 147 aaKnown RBP8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 MOCS2O96007 188 aaPredicted RBP8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 PEX11BO96011 259 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 APEHP13798 732 aaKnown RBP8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 LAG3P18627 525 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 S100A3P33764 101 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 HTR5AP47898 357 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 SRP9P49458 86 aaKnown RBP8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 RAB5CP51148 216 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 CCR6P51684 374 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 CRISP1P54107 249 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 WNT4P56705 351 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 TPI1P60174 286 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 RPS25P62851 125 aaKnown RBP8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 E2F1Q01094 437 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 VEZF1Q14119 521 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 SLC36A2Q495M3 483 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 TMEM201Q5SNT2 666 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 ATAT1Q5SQI0 421 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 DCAF8Q5TAQ9 597 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 CD200R1LQ6Q8B3 271 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 OAFQ86UD1 273 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 CFAP206Q8IYR0 622 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 ARRDC1Q8N5I2 433 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 ZSCAN1Q8NBB4 408 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 NEIL3Q8TAT5 605 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 LRR1Q96L50 414 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 GINS4Q9BRT9 223 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 TOLLIPQ9H0E2 274 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 METTL9Q9H1A3 318 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 C20orf85Q9H1P6 137 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 NTMQ9P121 344 aa8.08□□□□□ -1.12
SRGAP1-202ENST00000537556 SYNJ2BP-COX16A0A087WUM0 186 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 A0A1B0GUH1 482 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 TLR4O00206 839 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 PRRG1O14668 218 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 ECI2O75521 394 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 CRTAPO75718 401 aaPredicted RBP8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 UBXN7O94888 489 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 KLHL18O94889 574 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 APBB3O95704 486 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 RAB36O95755 333 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 HLA-DPB1P04440 258 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 HLA-DPA1P20036 260 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 ITGA3P26006 1051 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 SUOXP51687 545 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 UBE2IP63279 158 aaKnown RBP8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 FABP5Q01469 135 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 SOWAHAQ2M3V2 549 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 XKR3Q5GH77 459 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 TMEM255AQ5JRV8 349 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 SWSAP1Q6NVH7 229 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 SLC27A1Q6PCB7 646 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 TRIM46Q7Z4K8 759 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 SIAH3Q8IW03 269 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 LAS2Q8IYD9 372 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 HDDC3Q8N4P3 179 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 C15orf54Q8N8G6 183 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 AVL9Q8NBF6 648 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 RELL2Q8NC24 303 aaPredicted RBP8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 CA5BP1Q8WTZ4 195 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 IL4I1Q96RQ9 567 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 SPSB2Q99619 263 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 DERL2Q9GZP9 239 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 CACYBPQ9HB71 228 aaKnown RBP8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 BARX1Q9HBU1 254 aaPredicted RBP8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 SLC6A13Q9NSD5 602 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 RLIMQ9NVW2 624 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 SF3B6Q9Y3B4 125 aaKnown RBP8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 COL2A1P02458 1487 aaPredicted RBP8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 SMCHD1A6NHR9 2005 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 A0A1W2PRB8 838 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 GABRR3A8MPY1 467 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 IGHA2P01877 340 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 IFNGR1P15260 489 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 ZNF44P15621 663 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 IRS1P35568 1242 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 EFNA5P52803 228 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 HCCSP53701 268 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 PITPNAQ00169 270 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 DYRK1AQ13627 763 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 PKDCCQ504Y2 493 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 FBXO48Q5FWF7 155 aa8.07□□□□□ -1.12
SRGAP1-202ENST00000537556 C10orf91Q5T1B1 145 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms