RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 ZC3H14Q6PJT7 736 aaKnown RBP10.16□□□□□ -0.78
CLIP1-209ENST00000537178 WDR53Q7Z5U6 358 aaPredicted RBP10.16□□□□□ -0.78
CLIP1-209ENST00000537178 KLBQ86Z14 1044 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 IL17RCQ8NAC3 791 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 MTMR14Q8NCE2 650 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 ASB15Q8WXK1 588 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 LRR1Q96L50 414 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 WDR92Q96MX6 357 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 SPIN2AQ99865 258 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 VRK1Q99986 396 aaPredicted RBP10.16□□□□□ -0.78
CLIP1-209ENST00000537178 SPIN2BQ9BPZ2 258 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 CCDC32Q9BV29 185 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 GPRC5BQ9NZH0 403 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 REV1Q9UBZ9 1251 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 A0A1W2PPK0 400 aa10.15□□□□□ -0.78
CLIP1-209ENST00000537178 VSTM2BA6NLU5 285 aa10.15□□□□□ -0.78
CLIP1-209ENST00000537178 C1orf196B1AJZ1 125 aa10.15□□□□□ -0.78
CLIP1-209ENST00000537178 MAFKO60675 156 aa10.15□□□□□ -0.78
CLIP1-209ENST00000537178 RPS2P15880 293 aaKnown RBP10.15□□□□□ -0.78
CLIP1-209ENST00000537178 CD9P21926 228 aa10.15□□□□□ -0.78
CLIP1-209ENST00000537178 CDKN2CP42773 168 aa10.15□□□□□ -0.78
CLIP1-209ENST00000537178 GALK2Q01415 458 aa10.15□□□□□ -0.78
CLIP1-209ENST00000537178 TLE3Q04726 772 aa10.15□□□□□ -0.78
CLIP1-209ENST00000537178 GPR137CQ8N3F9 429 aa10.15□□□□□ -0.78
CLIP1-209ENST00000537178 TRUB1Q8WWH5 349 aaKnown RBP10.15□□□□□ -0.78
CLIP1-209ENST00000537178 PITX2Q99697 317 aa10.15□□□□□ -0.78
CLIP1-209ENST00000537178 SULT4A1Q9BR01 284 aa10.15□□□□□ -0.78
CLIP1-209ENST00000537178 ACOT13Q9NPJ3 140 aa10.15□□□□□ -0.78
CLIP1-209ENST00000537178 POT1Q9NUX5 634 aa10.15□□□□□ -0.78
CLIP1-209ENST00000537178 NDUFAF4Q9P032 175 aa10.15□□□□□ -0.78
CLIP1-209ENST00000537178 SDHDO14521 159 aa10.15□□□□□ -0.78
CLIP1-209ENST00000537178 RAC2P15153 192 aa10.15□□□□□ -0.78
CLIP1-209ENST00000537178 CD34P28906 385 aa10.15□□□□□ -0.78
CLIP1-209ENST00000537178 MAP2K4P45985 399 aa10.15□□□□□ -0.78
CLIP1-209ENST00000537178 CLCN2P51788 898 aa10.15□□□□□ -0.78
CLIP1-209ENST00000537178 NR0B1P51843 470 aaKnown RBP10.15□□□□□ -0.78
CLIP1-209ENST00000537178 ARHGAP1Q07960 439 aa10.15□□□□□ -0.78
CLIP1-209ENST00000537178 ZNF805Q5CZA5 627 aa10.15□□□□□ -0.78
CLIP1-209ENST00000537178 KRBOX4Q5JUW0 171 aa10.15□□□□□ -0.78
CLIP1-209ENST00000537178 UBE2UQ5VVX9 321 aa10.15□□□□□ -0.78
CLIP1-209ENST00000537178 RPS27LQ71UM5 84 aaKnown RBP10.15□□□□□ -0.78
CLIP1-209ENST00000537178 KIF18BQ86Y91 864 aa10.15□□□□□ -0.78
CLIP1-209ENST00000537178 MRPL41Q8IXM3 137 aaKnown RBP10.15□□□□□ -0.78
CLIP1-209ENST00000537178 CCDC71LQ8N9Z2 235 aa10.15□□□□□ -0.78
CLIP1-209ENST00000537178 OR13C3Q8NGS6 347 aa10.15□□□□□ -0.78
CLIP1-209ENST00000537178 RNF39Q9H2S5 420 aa10.15□□□□□ -0.78
CLIP1-209ENST00000537178 HSBP1L1C9JCN9 74 aa10.15□□□□□ -0.78
CLIP1-209ENST00000537178 PLATP00750 562 aa10.15□□□□□ -0.78
CLIP1-209ENST00000537178 MAGEA6P43360 314 aa10.15□□□□□ -0.78
CLIP1-209ENST00000537178 AGTR2P50052 363 aa10.15□□□□□ -0.78
CLIP1-209ENST00000537178 RPS21P63220 83 aaKnown RBP10.15□□□□□ -0.78
CLIP1-209ENST00000537178 TEAD2Q15562 447 aa10.15□□□□□ -0.78
CLIP1-209ENST00000537178 DEFB134Q4QY38 66 aa10.15□□□□□ -0.78
CLIP1-209ENST00000537178 KIAA0319Q5VV43 1072 aa10.15□□□□□ -0.78
CLIP1-209ENST00000537178 LIX1LQ8IVB5 337 aa10.15□□□□□ -0.78
CLIP1-209ENST00000537178 PLEKHO2Q8TD55 490 aa10.15□□□□□ -0.78
CLIP1-209ENST00000537178 LIN37Q96GY3 246 aaPredicted RBP10.15□□□□□ -0.78
CLIP1-209ENST00000537178 SMOQ99835 787 aa10.15□□□□□ -0.78
CLIP1-209ENST00000537178 RBCK1Q9BYM8 510 aa10.15□□□□□ -0.78
CLIP1-209ENST00000537178 KLHL13Q9P2N7 655 aa10.15□□□□□ -0.78
CLIP1-209ENST00000537178 KLHL21Q9UJP4 597 aa10.15□□□□□ -0.78
CLIP1-209ENST00000537178 PCDHGA6Q9Y5G7 932 aa10.15□□□□□ -0.78
CLIP1-209ENST00000537178 A0A0A6YYH2 397 aa10.15□□□□□ -0.79
CLIP1-209ENST00000537178 A6NJ64 397 aa10.15□□□□□ -0.79
CLIP1-209ENST00000537178 LEFTY2O00292 366 aa10.15□□□□□ -0.79
CLIP1-209ENST00000537178 INPPL1O15357 1258 aa10.15□□□□□ -0.79
CLIP1-209ENST00000537178 DNAJB6O75190 326 aa10.15□□□□□ -0.79
CLIP1-209ENST00000537178 STSP08842 583 aa10.15□□□□□ -0.79
CLIP1-209ENST00000537178 FGF3P11487 239 aaPredicted RBP10.15□□□□□ -0.79
CLIP1-209ENST00000537178 AKR1C4P17516 323 aa10.15□□□□□ -0.79
CLIP1-209ENST00000537178 OR4D2P58180 307 aa10.15□□□□□ -0.79
CLIP1-209ENST00000537178 GSTM4Q03013 218 aa10.15□□□□□ -0.79
CLIP1-209ENST00000537178 DLX2Q07687 328 aaPredicted RBP10.15□□□□□ -0.79
CLIP1-209ENST00000537178 SLAMF1Q13291 335 aa10.15□□□□□ -0.79
CLIP1-209ENST00000537178 TMEM35AQ53FP2 167 aa10.15□□□□□ -0.79
CLIP1-209ENST00000537178 C6orf120Q7Z4R8 191 aa10.15□□□□□ -0.79
CLIP1-209ENST00000537178 PXKQ7Z7A4 578 aa10.15□□□□□ -0.79
CLIP1-209ENST00000537178 OR5H2Q8NGV7 314 aa10.15□□□□□ -0.79
CLIP1-209ENST00000537178 STK35Q8TDR2 534 aa10.15□□□□□ -0.79
CLIP1-209ENST00000537178 C1orf74Q96LT6 269 aa10.15□□□□□ -0.79
CLIP1-209ENST00000537178 APMAPQ9HDC9 416 aa10.15□□□□□ -0.79
CLIP1-209ENST00000537178 OARD1Q9Y530 152 aa10.15□□□□□ -0.79
CLIP1-209ENST00000537178 MTMR11A4FU01 709 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 BEST1O76090 585 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 TSPAN15O95858 294 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 HLA-EP13747 358 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 RAB3BP20337 219 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 FBLP22087 321 aaKnown RBP10.14□□□□□ -0.79
CLIP1-209ENST00000537178 GABARAPL2P60520 117 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 INCA1Q0VD86 236 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 RSU1Q15404 277 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 SLC18B1Q6NT16 456 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 LILRB2Q8N423 598 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 IL22RA1Q8N6P7 574 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 ADAMTS18Q8TE60 1221 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 RAB9BQ9NP90 201 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 TLR9Q9NR96 1032 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 LRFN1Q9P244 771 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 GGT3PA6NGU5 568 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 TSPAN6O43657 245 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms