RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 FOXA1P55317 472 aa13.09□□□□□ -0.31
RTN3P1-201ENST00000536295 PLCXD2Q0VAA5 305 aa13.09□□□□□ -0.31
RTN3P1-201ENST00000536295 SPIN4Q56A73 249 aa13.09□□□□□ -0.31
RTN3P1-201ENST00000536295 SPDYAQ5MJ70 313 aa13.09□□□□□ -0.31
RTN3P1-201ENST00000536295 ZYG11AQ6WRX3 759 aa13.09□□□□□ -0.31
RTN3P1-201ENST00000536295 CCDC63Q8NA47 563 aa13.09□□□□□ -0.31
RTN3P1-201ENST00000536295 CDC26Q8NHZ8 85 aa13.09□□□□□ -0.31
RTN3P1-201ENST00000536295 C16orf78Q8WTQ4 265 aa13.09□□□□□ -0.31
RTN3P1-201ENST00000536295 KAT2AQ92830 837 aa13.09□□□□□ -0.31
RTN3P1-201ENST00000536295 OMA1Q96E52 524 aa13.09□□□□□ -0.31
RTN3P1-201ENST00000536295 LCORQ96JN0 433 aaPredicted RBP13.09□□□□□ -0.31
RTN3P1-201ENST00000536295 GNRHR2Q96P88 292 aa13.09□□□□□ -0.31
RTN3P1-201ENST00000536295 SECISBP2Q96T21 854 aaKnown RBP13.09□□□□□ -0.31
RTN3P1-201ENST00000536295 METTL7AQ9H8H3 244 aa13.09□□□□□ -0.31
RTN3P1-201ENST00000536295 ANKRA2Q9H9E1 313 aa13.09□□□□□ -0.31
RTN3P1-201ENST00000536295 NPDC1Q9NQX5 325 aaPredicted RBP13.09□□□□□ -0.31
RTN3P1-201ENST00000536295 Q9UFV3 132 aa13.09□□□□□ -0.31
RTN3P1-201ENST00000536295 ZNF639Q9UID6 485 aa13.09□□□□□ -0.31
RTN3P1-201ENST00000536295 NINQ8N4C6 2090 aa13.08□□□□□ -0.32
RTN3P1-201ENST00000536295 C2orf72A6NCS6 295 aa13.08□□□□□ -0.32
RTN3P1-201ENST00000536295 NME6O75414 186 aaPredicted RBP13.08□□□□□ -0.32
RTN3P1-201ENST00000536295 CRCPO75575 148 aa13.08□□□□□ -0.32
RTN3P1-201ENST00000536295 PROCP04070 461 aa13.08□□□□□ -0.32
RTN3P1-201ENST00000536295 DRD2P14416 443 aa13.08□□□□□ -0.32
RTN3P1-201ENST00000536295 GABRA1P14867 456 aa13.08□□□□□ -0.32
RTN3P1-201ENST00000536295 TIA1P31483 386 aaKnown RBP eCLIP13.08□□□□□ -0.32
RTN3P1-201ENST00000536295 ADH7P40394 386 aa13.08□□□□□ -0.32
RTN3P1-201ENST00000536295 ZFP36L2P47974 494 aaKnown RBP13.08□□□□□ -0.32
RTN3P1-201ENST00000536295 NAGLUP54802 743 aa13.08□□□□□ -0.32
RTN3P1-201ENST00000536295 KRTAP10-9P60411 292 aa13.08□□□□□ -0.32
RTN3P1-201ENST00000536295 TLE4Q04727 773 aa13.08□□□□□ -0.32
RTN3P1-201ENST00000536295 TFF3Q07654 80 aa13.08□□□□□ -0.32
RTN3P1-201ENST00000536295 FNDC7Q5VTL7 733 aa13.08□□□□□ -0.32
RTN3P1-201ENST00000536295 ULK2Q8IYT8 1036 aa13.08□□□□□ -0.32
RTN3P1-201ENST00000536295 OR9A2Q8NGT5 310 aa13.08□□□□□ -0.32
RTN3P1-201ENST00000536295 EPS8L3Q8TE67 593 aaKnown RBP13.08□□□□□ -0.32
RTN3P1-201ENST00000536295 CTHRC1Q96CG8 243 aa13.08□□□□□ -0.32
RTN3P1-201ENST00000536295 CCDC126Q96EE4 140 aa13.08□□□□□ -0.32
RTN3P1-201ENST00000536295 HSPBAP1Q96EW2 488 aa13.08□□□□□ -0.32
RTN3P1-201ENST00000536295 NODALQ96S42 347 aa13.08□□□□□ -0.32
RTN3P1-201ENST00000536295 SHCBP1LQ9BZQ2 653 aa13.08□□□□□ -0.32
RTN3P1-201ENST00000536295 C12orf65Q9H3J6 166 aaKnown RBP13.08□□□□□ -0.32
RTN3P1-201ENST00000536295 GIMAP4Q9NUV9 329 aa13.08□□□□□ -0.32
RTN3P1-201ENST00000536295 PRODH2Q9UF12 536 aa13.08□□□□□ -0.32
RTN3P1-201ENST00000536295 C15orf41Q9Y2V0 281 aa13.08□□□□□ -0.32
RTN3P1-201ENST00000536295 SLC6A5Q9Y345 797 aa13.08□□□□□ -0.32
RTN3P1-201ENST00000536295 PHF3Q92576 2039 aaKnown RBP13.07□□□□□ -0.32
RTN3P1-201ENST00000536295 ANXA4P09525 319 aaPredicted RBP13.07□□□□□ -0.32
RTN3P1-201ENST00000536295 MSX1P28360 303 aa13.07□□□□□ -0.32
RTN3P1-201ENST00000536295 EMDP50402 254 aa13.07□□□□□ -0.32
RTN3P1-201ENST00000536295 CDK9P50750 372 aaKnown RBP13.07□□□□□ -0.32
RTN3P1-201ENST00000536295 HEPACAMQ14CZ8 416 aa13.07□□□□□ -0.32
RTN3P1-201ENST00000536295 IMPG1Q17R60 797 aa13.07□□□□□ -0.32
RTN3P1-201ENST00000536295 EIPR1Q53HC9 387 aa13.07□□□□□ -0.32
RTN3P1-201ENST00000536295 ZNF628Q5EBL2 1059 aa13.07□□□□□ -0.32
RTN3P1-201ENST00000536295 CFAP157Q5JU67 520 aa13.07□□□□□ -0.32
RTN3P1-201ENST00000536295 ANGPTL8Q6UXH0 198 aa13.07□□□□□ -0.32
RTN3P1-201ENST00000536295 WDR53Q7Z5U6 358 aaPredicted RBP13.07□□□□□ -0.32
RTN3P1-201ENST00000536295 LIX1LQ8IVB5 337 aa13.07□□□□□ -0.32
RTN3P1-201ENST00000536295 ACBD4Q8NC06 268 aa13.07□□□□□ -0.32
RTN3P1-201ENST00000536295 OR1J4Q8NGS1 313 aa13.07□□□□□ -0.32
RTN3P1-201ENST00000536295 HGDQ93099 445 aa13.07□□□□□ -0.32
RTN3P1-201ENST00000536295 C14orf79Q96F83 325 aa13.07□□□□□ -0.32
RTN3P1-201ENST00000536295 TMEM41AQ96HV5 264 aa13.07□□□□□ -0.32
RTN3P1-201ENST00000536295 GALNT9Q9HCQ5 603 aa13.07□□□□□ -0.32
RTN3P1-201ENST00000536295 KLRF1Q9NZS2 232 aa13.07□□□□□ -0.32
RTN3P1-201ENST00000536295 SENP1Q9P0U3 644 aa13.07□□□□□ -0.32
RTN3P1-201ENST00000536295 ADGRG4Q8IZF6 3080 aa13.06□□□□□ -0.32
RTN3P1-201ENST00000536295 FRG2CA6NGY1 282 aa13.06□□□□□ -0.32
RTN3P1-201ENST00000536295 COPEO14579 308 aa13.06□□□□□ -0.32
RTN3P1-201ENST00000536295 ACOX3O15254 700 aa13.06□□□□□ -0.32
RTN3P1-201ENST00000536295 PLIN3O60664 434 aa13.06□□□□□ -0.32
RTN3P1-201ENST00000536295 UGT2B11O75310 529 aa13.06□□□□□ -0.32
RTN3P1-201ENST00000536295 REM1O75628 298 aa13.06□□□□□ -0.32
RTN3P1-201ENST00000536295 HPNP05981 417 aa13.06□□□□□ -0.32
RTN3P1-201ENST00000536295 HOXD4P09016 255 aaPredicted RBP13.06□□□□□ -0.32
RTN3P1-201ENST00000536295 NAGAP17050 411 aa13.06□□□□□ -0.32
RTN3P1-201ENST00000536295 IGFBP2P18065 325 aa13.06□□□□□ -0.32
RTN3P1-201ENST00000536295 DRD5P21918 477 aa13.06□□□□□ -0.32
RTN3P1-201ENST00000536295 ELAVL4P26378 380 aaKnown RBP13.06□□□□□ -0.32
RTN3P1-201ENST00000536295 PPICP45877 212 aa13.06□□□□□ -0.32
RTN3P1-201ENST00000536295 CCT5P48643 541 aa13.06□□□□□ -0.32
RTN3P1-201ENST00000536295 WNT3P56703 355 aa13.06□□□□□ -0.32
RTN3P1-201ENST00000536295 DCAF7P61962 342 aa13.06□□□□□ -0.32
RTN3P1-201ENST00000536295 CRYZQ08257 329 aaKnown RBP13.06□□□□□ -0.32
RTN3P1-201ENST00000536295 C2orf80Q0P641 193 aa13.06□□□□□ -0.32
RTN3P1-201ENST00000536295 ERCC6LQ2NKX8 1250 aa13.06□□□□□ -0.32
RTN3P1-201ENST00000536295 CCDC153Q494R4 210 aa13.06□□□□□ -0.32
RTN3P1-201ENST00000536295 WIPI1Q5MNZ9 446 aaPredicted RBP13.06□□□□□ -0.32
RTN3P1-201ENST00000536295 TIGD3Q6B0B8 471 aa13.06□□□□□ -0.32
RTN3P1-201ENST00000536295 FRMD7Q6ZUT3 714 aa13.06□□□□□ -0.32
RTN3P1-201ENST00000536295 SH2D5Q6ZV89 423 aa13.06□□□□□ -0.32
RTN3P1-201ENST00000536295 NUP54Q7Z3B4 507 aa13.06□□□□□ -0.32
RTN3P1-201ENST00000536295 CNPY4Q8N129 248 aa13.06□□□□□ -0.32
RTN3P1-201ENST00000536295 C4orf33Q8N1A6 199 aa13.06□□□□□ -0.32
RTN3P1-201ENST00000536295 EIF1ADQ8N9N8 165 aaKnown RBP13.06□□□□□ -0.32
RTN3P1-201ENST00000536295 ZNF675Q8TD23 568 aa13.06□□□□□ -0.32
RTN3P1-201ENST00000536295 TMBIM1Q969X1 311 aa13.06□□□□□ -0.32
RTN3P1-201ENST00000536295 BBS4Q96RK4 519 aa13.06□□□□□ -0.32
RTN3P1-201ENST00000536295 TIMP4Q99727 224 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms