RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 SYT5O00445 386 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 PRODHO43272 600 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 ERI3O43414 337 aaKnown RBP15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 NR2F6P10588 404 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 ACP2P11117 423 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 ACP5P13686 325 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 HOXD12P35452 270 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 AHRP35869 848 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 BCL6P41182 706 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 PSPHP78330 225 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 FUT5Q11128 374 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 LARS2Q15031 903 aaKnown RBP15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 AGBL4Q5VU57 503 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 SLC27A4Q6P1M0 643 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 MRGPREQ86SM8 312 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 LAPTM4BQ86VI4 370 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 GJD3Q8N144 294 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 CACTIN-AS1Q8N1I8 211 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 CLDN22Q8N7P3 220 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 GPR151Q8TDV0 419 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 SLC35B4Q969S0 331 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 HOXD1Q9GZZ0 328 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 TPK1Q9H3S4 243 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 OSGEPL1Q9H4B0 414 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 XKR8Q9H6D3 395 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 MRPS30Q9NP92 439 aaKnown RBP15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 FGF20Q9NP95 211 aaPredicted RBP15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 IMP3Q9NV31 184 aaKnown RBP15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 TBC1D24Q9ULP9 559 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 ATG4BQ9Y4P1 393 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 A0A087WUU8 490 aa15.08■□□□□ 0
CHMP1A-202ENST00000535997 TMEM129A0AVI4 362 aa15.08■□□□□ 0
CHMP1A-202ENST00000535997 STK25O00506 426 aa15.08■□□□□ 0
CHMP1A-202ENST00000535997 ATP5A1P25705 553 aaKnown RBP15.08■□□□□ 0
CHMP1A-202ENST00000535997 WNT4P56705 351 aa15.08■□□□□ 0
CHMP1A-202ENST00000535997 ABATP80404 500 aa15.08■□□□□ 0
CHMP1A-202ENST00000535997 LSM11P83369 360 aaKnown RBP eCLIP15.08■□□□□ 0
CHMP1A-202ENST00000535997 PRR5P85299 388 aa15.08■□□□□ 0
CHMP1A-202ENST00000535997 PLK5Q496M5 336 aa15.08■□□□□ 0
CHMP1A-202ENST00000535997 GPAT3Q53EU6 434 aa15.08■□□□□ 0
CHMP1A-202ENST00000535997 OLIG3Q7RTU3 272 aa15.08■□□□□ 0
CHMP1A-202ENST00000535997 C12orf76Q8N812 135 aaPredicted RBP15.08■□□□□ 0
CHMP1A-202ENST00000535997 SRFBP1Q8NEF9 429 aaKnown RBP15.08■□□□□ 0
CHMP1A-202ENST00000535997 OR8K5Q8NH50 307 aa15.08■□□□□ 0
CHMP1A-202ENST00000535997 TMEM163Q8TC26 289 aa15.08■□□□□ 0
CHMP1A-202ENST00000535997 GNPDA2Q8TDQ7 276 aa15.08■□□□□ 0
CHMP1A-202ENST00000535997 YIPF4Q9BSR8 244 aa15.08■□□□□ 0
CHMP1A-202ENST00000535997 SARGQ9BW04 601 aa15.08■□□□□ 0
CHMP1A-202ENST00000535997 ISYNA1Q9NPH2 558 aa15.08■□□□□ 0
CHMP1A-202ENST00000535997 PHPT1Q9NRX4 125 aaPredicted RBP15.08■□□□□ 0
CHMP1A-202ENST00000535997 GRIP1Q9Y3R0 1128 aa15.08■□□□□ 0
CHMP1A-202ENST00000535997 C5orf67F2Z3F1 127 aa15.08■□□□□ 0
CHMP1A-202ENST00000535997 MID1O15344 667 aa15.08■□□□□ 0
CHMP1A-202ENST00000535997 PRKRAO75569 313 aaKnown RBP15.08■□□□□ 0
CHMP1A-202ENST00000535997 CYP7B1O75881 506 aa15.08■□□□□ 0
CHMP1A-202ENST00000535997 CDRT1O95170 752 aa15.08■□□□□ 0
CHMP1A-202ENST00000535997 PAK4O96013 591 aaPredicted RBP15.08■□□□□ 0
CHMP1A-202ENST00000535997 CSNK2A2P19784 350 aaPredicted RBP15.08■□□□□ 0
CHMP1A-202ENST00000535997 PKLRP30613 574 aa15.08■□□□□ 0
CHMP1A-202ENST00000535997 MPIP34949 423 aa15.08■□□□□ 0
CHMP1A-202ENST00000535997 TSFMP43897 325 aaKnown RBP15.08■□□□□ 0
CHMP1A-202ENST00000535997 GAS1P54826 345 aa15.08■□□□□ 0
CHMP1A-202ENST00000535997 KRT33BQ14525 404 aa15.08■□□□□ 0
CHMP1A-202ENST00000535997 DUSP6Q16828 381 aa15.08■□□□□ 0
CHMP1A-202ENST00000535997 ATAT1Q5SQI0 421 aa15.08■□□□□ 0
CHMP1A-202ENST00000535997 CELF2-AS1Q8N7Q2 184 aa15.08■□□□□ 0
CHMP1A-202ENST00000535997 OR2L5Q8NG80 312 aa15.08■□□□□ 0
CHMP1A-202ENST00000535997 TEX47Q8TBZ9 253 aa15.08■□□□□ 0
CHMP1A-202ENST00000535997 OTUB1Q96FW1 271 aaPredicted RBP15.08■□□□□ 0
CHMP1A-202ENST00000535997 NELL2Q99435 816 aa15.08■□□□□ 0
CHMP1A-202ENST00000535997 TIMM29Q9BSF4 260 aa15.08■□□□□ 0
CHMP1A-202ENST00000535997 SAP130Q9H0E3 1048 aa15.08■□□□□ 0
CHMP1A-202ENST00000535997 CES1P1Q9UKY3 287 aa15.08■□□□□ 0
CHMP1A-202ENST00000535997 ENTPD4Q9Y227 616 aa15.08■□□□□ 0
CHMP1A-202ENST00000535997 LIPT1Q9Y234 373 aa15.08■□□□□ 0
CHMP1A-202ENST00000535997 CMAHPQ9Y471 501 aa15.08■□□□□ 0
CHMP1A-202ENST00000535997 LINC01553A4QN01 128 aa15.07■□□□□ 0
CHMP1A-202ENST00000535997 ANTXRLA6NF34 631 aa15.07■□□□□ 0
CHMP1A-202ENST00000535997 PLD2O14939 933 aa15.07■□□□□ 0
CHMP1A-202ENST00000535997 KCNJ13O60928 360 aa15.07■□□□□ 0
CHMP1A-202ENST00000535997 TSPAN19P0C672 248 aa15.07■□□□□ 0
CHMP1A-202ENST00000535997 OR2B6P58173 313 aa15.07■□□□□ 0
CHMP1A-202ENST00000535997 TAS2R41P59536 307 aa15.07■□□□□ 0
CHMP1A-202ENST00000535997 TGM3Q08188 693 aa15.07■□□□□ 0
CHMP1A-202ENST00000535997 TPBGQ13641 420 aa15.07■□□□□ 0
CHMP1A-202ENST00000535997 ZNF311Q5JNZ3 666 aa15.07■□□□□ 0
CHMP1A-202ENST00000535997 SLC48A1Q6P1K1 146 aa15.07■□□□□ 0
CHMP1A-202ENST00000535997 SLC36A4Q6YBV0 504 aa15.07■□□□□ 0
CHMP1A-202ENST00000535997 NRARPQ7Z6K4 114 aa15.07■□□□□ 0
CHMP1A-202ENST00000535997 KIF18BQ86Y91 864 aa15.07■□□□□ 0
CHMP1A-202ENST00000535997 LAX1Q8IWV1 398 aa15.07■□□□□ 0
CHMP1A-202ENST00000535997 FGF13Q92913 245 aa15.07■□□□□ 0
CHMP1A-202ENST00000535997 C16orf58Q96GQ5 468 aa15.07■□□□□ 0
CHMP1A-202ENST00000535997 MSLNLQ96KJ4 702 aa15.07■□□□□ 0
CHMP1A-202ENST00000535997 MED18Q9BUE0 208 aa15.07■□□□□ 0
CHMP1A-202ENST00000535997 SPIN1Q9Y657 262 aaPredicted RBP15.07■□□□□ 0
CHMP1A-202ENST00000535997 DOCK9Q9BZ29 2069 aa15.07■□□□□ 0
CHMP1A-202ENST00000535997 KIAA0100Q14667 2235 aaKnown RBP15.07■□□□□ 0
CHMP1A-202ENST00000535997 EMC8O43402 210 aa15.06■□□□□ 0
CHMP1A-202ENST00000535997 PRICKLE3O43900 615 aaPredicted RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms