RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 SOAT1P35610 550 aa16.97■□□□□ 0.31
RAB40C-203ENST00000535977 MED22Q15528 200 aa16.97■□□□□ 0.31
RAB40C-203ENST00000535977 TIMM50Q3ZCQ8 353 aa16.97■□□□□ 0.31
RAB40C-203ENST00000535977 FLYWCH1Q4VC44 716 aa16.97■□□□□ 0.31
RAB40C-203ENST00000535977 TCEAL5Q5H9L2 206 aa16.97■□□□□ 0.31
RAB40C-203ENST00000535977 PDZK1Q5T2W1 519 aa16.97■□□□□ 0.31
RAB40C-203ENST00000535977 C19orf48Q6RUI8 117 aa16.97■□□□□ 0.31
RAB40C-203ENST00000535977 ZNF782Q6ZMW2 699 aaPredicted RBP16.97■□□□□ 0.31
RAB40C-203ENST00000535977 CRELD1Q96HD1 420 aa16.97■□□□□ 0.31
RAB40C-203ENST00000535977 HYLS1Q96M11 299 aa16.97■□□□□ 0.31
RAB40C-203ENST00000535977 FERD3LQ96RJ6 166 aa16.97■□□□□ 0.31
RAB40C-203ENST00000535977 HDAC8Q9BY41 377 aa16.97■□□□□ 0.31
RAB40C-203ENST00000535977 DIMT1Q9UNQ2 313 aaKnown RBP16.97■□□□□ 0.31
RAB40C-203ENST00000535977 PPM1BO75688 479 aa16.96■□□□□ 0.31
RAB40C-203ENST00000535977 CCNB2O95067 398 aa16.96■□□□□ 0.31
RAB40C-203ENST00000535977 LIMS1P48059 325 aa16.96■□□□□ 0.31
RAB40C-203ENST00000535977 HEPACAMQ14CZ8 416 aa16.96■□□□□ 0.31
RAB40C-203ENST00000535977 TOR1AIP1Q5JTV8 583 aa16.96■□□□□ 0.31
RAB40C-203ENST00000535977 KRT73Q86Y46 540 aa16.96■□□□□ 0.31
RAB40C-203ENST00000535977 FAM181AQ8N9Y4 354 aa16.96■□□□□ 0.31
RAB40C-203ENST00000535977 TFGQ92734 400 aaPredicted RBP16.96■□□□□ 0.31
RAB40C-203ENST00000535977 ZNF707Q96C28 371 aaPredicted RBP16.96■□□□□ 0.31
RAB40C-203ENST00000535977 NEURL3Q96EH8 262 aa16.96■□□□□ 0.31
RAB40C-203ENST00000535977 GPR137Q96N19 417 aa16.96■□□□□ 0.31
RAB40C-203ENST00000535977 MGLLQ99685 303 aa16.96■□□□□ 0.31
RAB40C-203ENST00000535977 SCPEP1Q9HB40 452 aa16.96■□□□□ 0.31
RAB40C-203ENST00000535977 MCCC2Q9HCC0 563 aa16.96■□□□□ 0.31
RAB40C-203ENST00000535977 NEUROD4Q9HD90 331 aa16.96■□□□□ 0.31
RAB40C-203ENST00000535977 ACER3Q9NUN7 267 aa16.96■□□□□ 0.31
RAB40C-203ENST00000535977 TAAR2Q9P1P5 351 aa16.96■□□□□ 0.31
RAB40C-203ENST00000535977 CLCA3PQ9Y6N3 262 aa16.96■□□□□ 0.31
RAB40C-203ENST00000535977 MYL12BO14950 172 aa16.96■□□□□ 0.3
RAB40C-203ENST00000535977 RFPL3O75679 317 aa16.96■□□□□ 0.3
RAB40C-203ENST00000535977 GADD45GO95257 159 aa16.96■□□□□ 0.3
RAB40C-203ENST00000535977 IFNW1P05000 195 aa16.96■□□□□ 0.3
RAB40C-203ENST00000535977 IFNA16P05015 189 aa16.96■□□□□ 0.3
RAB40C-203ENST00000535977 MYL12AP19105 171 aa16.96■□□□□ 0.3
RAB40C-203ENST00000535977 SSTR4P31391 388 aa16.96■□□□□ 0.3
RAB40C-203ENST00000535977 METAP1P53582 386 aa16.96■□□□□ 0.3
RAB40C-203ENST00000535977 MEF2AQ02078 507 aaPredicted RBP16.96■□□□□ 0.3
RAB40C-203ENST00000535977 MRPL28Q13084 256 aaKnown RBP16.96■□□□□ 0.3
RAB40C-203ENST00000535977 SSX1Q16384 188 aa16.96■□□□□ 0.3
RAB40C-203ENST00000535977 KHDRBS2Q5VWX1 349 aaKnown RBP16.96■□□□□ 0.3
RAB40C-203ENST00000535977 TIGD4Q8IY51 512 aa16.96■□□□□ 0.3
RAB40C-203ENST00000535977 C9orf43Q8TAL5 461 aaPredicted RBP16.96■□□□□ 0.3
RAB40C-203ENST00000535977 TMEM245Q9H330 911 aa16.96■□□□□ 0.3
RAB40C-203ENST00000535977 A4GALTQ9NPC4 353 aa16.96■□□□□ 0.3
RAB40C-203ENST00000535977 TMEM184CQ9NVA4 438 aa16.96■□□□□ 0.3
RAB40C-203ENST00000535977 IMPAD1Q9NX62 359 aa16.96■□□□□ 0.3
RAB40C-203ENST00000535977 ZNF451Q9Y4E5 1061 aa16.96■□□□□ 0.3
RAB40C-203ENST00000535977 SH3D21A4FU49 640 aa16.95■□□□□ 0.3
RAB40C-203ENST00000535977 SEC14L5O43304 696 aa16.95■□□□□ 0.3
RAB40C-203ENST00000535977 OR1E2P47887 323 aa16.95■□□□□ 0.3
RAB40C-203ENST00000535977 RRAS2P62070 204 aaPredicted RBP16.95■□□□□ 0.3
RAB40C-203ENST00000535977 BTN1A1Q13410 526 aa16.95■□□□□ 0.3
RAB40C-203ENST00000535977 ZNF367Q7RTV3 350 aa16.95■□□□□ 0.3
RAB40C-203ENST00000535977 ZNF578Q96N58 590 aaPredicted RBP16.95■□□□□ 0.3
RAB40C-203ENST00000535977 ABCB9Q9NP78 766 aa16.95■□□□□ 0.3
RAB40C-203ENST00000535977 LRRK1Q38SD2 2015 aa16.95■□□□□ 0.3
RAB40C-203ENST00000535977 ADRA2AP08913 450 aa16.95■□□□□ 0.3
RAB40C-203ENST00000535977 EN2P19622 333 aaPredicted RBP16.95■□□□□ 0.3
RAB40C-203ENST00000535977 RORCP51449 518 aa16.95■□□□□ 0.3
RAB40C-203ENST00000535977 CDC42P60953 191 aa16.95■□□□□ 0.3
RAB40C-203ENST00000535977 ZNF234Q14588 700 aa16.95■□□□□ 0.3
RAB40C-203ENST00000535977 LARS2Q15031 903 aaKnown RBP16.95■□□□□ 0.3
RAB40C-203ENST00000535977 IER5LQ5T953 404 aa16.95■□□□□ 0.3
RAB40C-203ENST00000535977 LRRTM4Q86VH4 590 aa16.95■□□□□ 0.3
RAB40C-203ENST00000535977 ANKRD53Q8N9V6 530 aa16.95■□□□□ 0.3
RAB40C-203ENST00000535977 ZNF740Q8NDX6 193 aa16.95■□□□□ 0.3
RAB40C-203ENST00000535977 OR5K2Q8NHB8 316 aa16.95■□□□□ 0.3
RAB40C-203ENST00000535977 PHOSPHO2Q8TCD6 241 aa16.95■□□□□ 0.3
RAB40C-203ENST00000535977 GFM1Q96RP9 751 aaKnown RBP16.95■□□□□ 0.3
RAB40C-203ENST00000535977 TMEM106CQ9BVX2 250 aa16.95■□□□□ 0.3
RAB40C-203ENST00000535977 GALNT9Q9HCQ5 603 aa16.95■□□□□ 0.3
RAB40C-203ENST00000535977 ADAM29Q9UKF5 820 aa16.95■□□□□ 0.3
RAB40C-203ENST00000535977 ACSL6Q9UKU0 697 aa16.95■□□□□ 0.3
RAB40C-203ENST00000535977 RAB23Q9ULC3 237 aa16.95■□□□□ 0.3
RAB40C-203ENST00000535977 NUP210Q8TEM1 1887 aaPredicted RBP16.95■□□□□ 0.3
RAB40C-203ENST00000535977 TRBC2A0A5B9 178 aa16.94■□□□□ 0.3
RAB40C-203ENST00000535977 FABP12A6NFH5 140 aa16.94■□□□□ 0.3
RAB40C-203ENST00000535977 CCDC85CA6NKD9 419 aa16.94■□□□□ 0.3
RAB40C-203ENST00000535977 C5orf58C9J3I9 102 aa16.94■□□□□ 0.3
RAB40C-203ENST00000535977 CCR8P51685 355 aa16.94■□□□□ 0.3
RAB40C-203ENST00000535977 ZNF697Q5TEC3 545 aa16.94■□□□□ 0.3
RAB40C-203ENST00000535977 FAM83HQ6ZRV2 1179 aaPredicted RBP16.94■□□□□ 0.3
RAB40C-203ENST00000535977 HDDC2Q7Z4H3 204 aa16.94■□□□□ 0.3
RAB40C-203ENST00000535977 LINC00469Q8N7U9 141 aa16.94■□□□□ 0.3
RAB40C-203ENST00000535977 GDPD1Q8N9F7 314 aa16.94■□□□□ 0.3
RAB40C-203ENST00000535977 OR5AR1Q8NGP9 310 aa16.94■□□□□ 0.3
RAB40C-203ENST00000535977 OR52J3Q8NH60 311 aa16.94■□□□□ 0.3
RAB40C-203ENST00000535977 OR5AK3PQ8NH89 298 aa16.94■□□□□ 0.3
RAB40C-203ENST00000535977 SMPDL3AQ92484 453 aa16.94■□□□□ 0.3
RAB40C-203ENST00000535977 GABRB1P18505 474 aa16.94■□□□□ 0.3
RAB40C-203ENST00000535977 MAP2K3P46734 347 aa16.94■□□□□ 0.3
RAB40C-203ENST00000535977 SLC6A11P48066 632 aa16.94■□□□□ 0.3
RAB40C-203ENST00000535977 CASP9P55211 416 aa16.94■□□□□ 0.3
RAB40C-203ENST00000535977 CNTN1Q12860 1018 aa16.94■□□□□ 0.3
RAB40C-203ENST00000535977 PYDC2Q56P42 97 aa16.94■□□□□ 0.3
RAB40C-203ENST00000535977 FAM46CQ5VWP2 391 aa16.94■□□□□ 0.3
RAB40C-203ENST00000535977 ANKRD54Q6NXT1 300 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms