RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 CAPN14A8MX76 684 aa9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 ABCB1P08183 1280 aaPredicted RBP9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 HSD3B1P14060 373 aa9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 GABRA1P14867 456 aa9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 IMPDH1P20839 514 aa9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 GPX3P22352 226 aa9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 HSD3B2P26439 372 aa9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 ABCD3P28288 659 aa9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 HOXC12P31275 282 aa9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 ADH7P40394 386 aa9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 ARL1P40616 181 aaPredicted RBP9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 CASP3P42574 277 aa9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 KIR2DL3P43628 341 aa9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 ZFP36L2P47974 494 aaKnown RBP9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 MAPK12P53778 367 aa9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 RAE1P78406 368 aaKnown RBP9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 PPP2R2BQ00005 443 aa9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 RPS6KA2Q15349 733 aa9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 SGO1Q5FBB7 561 aa9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 WLSQ5T9L3 541 aa9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 LGSNQ5TDP6 509 aa9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 FBXW10Q5XX13 1052 aa9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 BICRALQ6AI39 1079 aa9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 FAM111BQ6SJ93 734 aa9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 TMEM64Q6YI46 380 aa9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 B3GNT6Q6ZMB0 384 aa9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 SH2D5Q6ZV89 423 aa9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 SEM1Q6ZVN7 128 aa9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 TRMT10CQ7L0Y3 403 aaKnown RBP9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 LIX1LQ8IVB5 337 aa9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 SIMC1Q8NDZ2 872 aa9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 FAM13CQ8NE31 585 aa9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 L3HYPDHQ96EM0 354 aa9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 TMEM237Q96Q45 408 aa9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 ZNF382Q96SR6 550 aa9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 DOHHQ9BU89 302 aa9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 LDAHQ9H6V9 325 aa9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 MAT2BQ9NZL9 334 aa9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 HEY2Q9UBP5 337 aa9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 VPS29Q9UBQ0 182 aa9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 Q9UFV3 132 aa9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 ACAD8Q9UKU7 415 aa9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 MED12Q93074 2177 aa9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 HIVEP2P31629 2446 aa9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 TLN2Q9Y4G6 2542 aa9.21□□□□□ -0.94
CLSTN3-203ENST00000534830 MPDZO75970 2070 aa9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 KIF2AO00139 706 aaPredicted RBP9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 MANBAO00462 879 aa9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 TP53I11O14683 189 aa9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 GUCY1B2O75343 617 aa9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 SNX4O95219 450 aa9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 LRATO95237 230 aa9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 CBX7O95931 251 aa9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 HPNP05981 417 aa9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 FAM153BP0C7A2 387 aa9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 CHN1P15882 459 aa9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 NAGAP17050 411 aa9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 TAC1P20366 129 aa9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 NT5EP21589 574 aa9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 ATP5F1P24539 256 aaPredicted RBP9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 PTGDSP41222 190 aa9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 EMDP50402 254 aa9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 PRKAA2P54646 552 aa9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 KCNJ2P63252 427 aa9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 CRYZQ08257 329 aaKnown RBP9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 CSTF3Q12996 717 aaKnown RBP9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 RASA2Q15283 850 aa9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 FAM153CQ494X1 144 aa9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 NHSL2Q5HYW2 709 aa9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 TCHHL1Q5QJ38 904 aaPredicted RBP9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 C1orf185Q5T7R7 199 aa9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 RIPPLY2Q5TAB7 128 aa9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 VWA5B2Q8N398 1253 aa9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 C1orf52Q8N6N3 182 aaKnown RBP9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 CEP112Q8N8E3 955 aa9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 ZNF675Q8TD23 568 aa9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 ACMSDQ8TDX5 336 aa9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 DIO2Q92813 273 aa9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 HGDQ93099 445 aa9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 CNRIP1Q96F85 164 aaPredicted RBP9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 TMEM41AQ96HV5 264 aa9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 ZNF597Q96LX8 424 aa9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 RILPQ96NA2 401 aa9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 ACPTQ9BZG2 426 aa9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 NXF5Q9H1B4 397 aaKnown RBP9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 SLC6A15Q9H2J7 730 aa9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 NEUROD4Q9HD90 331 aa9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 NMRK1Q9NWW6 199 aa9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 SIRT5Q9NXA8 310 aa9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 MCM8Q9UJA3 840 aa9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 CFL2Q9Y281 166 aa9.2□□□□□ -0.94
CLSTN3-203ENST00000534830 GOLGA6L10A6NI86 522 aa9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 A6NNC1 897 aa9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 AHRRA9YTQ3 701 aa9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 INAFM1C9JVW0 142 aa9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 TO15178 435 aa9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 ERAL1O75616 437 aaKnown RBP9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 PPM1BO75688 479 aa9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 SUPT7LO94864 414 aa9.19□□□□□ -0.94
CLSTN3-203ENST00000534830 ATE1O95260 518 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms